Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G134000.1 | Wheat | cytosol, mitochondrion, nucleus | 97.35 | 96.32 |
| TraesCS4D01G128900.1 | Wheat | cytosol, mitochondrion, nucleus | 96.99 | 92.88 |
| HORVU4Hr1G025770.8 | Barley | endoplasmic reticulum | 93.1 | 87.09 |
| TraesCS5A01G133900.1 | Wheat | cytosol | 63.01 | 68.33 |
| Zm00001d016149_P001 | Maize | cytosol | 55.58 | 66.67 |
| EES04840 | Sorghum | cytosol | 56.81 | 65.64 |
| Zm00001d053438_P002 | Maize | cytosol | 52.92 | 61.02 |
| EES15655 | Sorghum | cytosol | 57.52 | 57.62 |
| Zm00001d023372_P001 | Maize | cytosol | 55.75 | 57.17 |
| Zm00001d017393_P001 | Maize | plastid | 15.75 | 52.98 |
| Zm00001d004931_P001 | Maize | cytosol, nucleus, plasma membrane | 47.43 | 50.09 |
| CDY05148 | Canola | cytosol | 3.72 | 46.67 |
| GSMUA_Achr11P... | Banana | cytosol | 29.2 | 44.0 |
| GSMUA_Achr8P08580_001 | Banana | cytosol | 29.2 | 42.97 |
| EES07966 | Sorghum | cytosol, nucleus, peroxisome | 37.7 | 42.43 |
| OQU82864 | Sorghum | cytosol | 35.04 | 42.04 |
| GSMUA_Achr8P00380_001 | Banana | cytosol | 30.09 | 41.46 |
| GSMUA_Achr11P... | Banana | cytosol, extracellular | 17.52 | 41.08 |
| KRH11382 | Soybean | cytosol | 35.4 | 40.65 |
| KXG27723 | Sorghum | nucleus | 42.3 | 40.17 |
| KRH20903 | Soybean | cytosol | 35.58 | 39.96 |
| GSMUA_Achr8P00190_001 | Banana | cytosol | 18.41 | 39.39 |
| AT3G06130.1 | Thale cress | cytosol | 31.68 | 37.84 |
| KRH51031 | Soybean | cytosol | 32.57 | 37.55 |
| Solyc01g080070.2.1 | Tomato | cytosol | 28.14 | 37.41 |
| GSMUA_Achr3P09060_001 | Banana | cytosol, mitochondrion, nucleus | 26.73 | 37.38 |
| Solyc01g098760.2.1 | Tomato | cytosol | 28.14 | 37.24 |
| GSMUA_Achr10P... | Banana | cytosol | 27.61 | 37.23 |
| CDY13960 | Canola | cytosol | 32.57 | 37.17 |
| KRH02117 | Soybean | cytosol | 32.74 | 37.07 |
| VIT_05s0020g02690.t01 | Wine grape | cytosol | 32.21 | 37.07 |
| Bra020774.1-P | Field mustard | cytosol | 30.8 | 36.02 |
| PGSC0003DMT400073578 | Potato | cytosol | 27.43 | 35.55 |
| GSMUA_Achr8P21830_001 | Banana | endoplasmic reticulum | 25.66 | 34.44 |
| AT5G19090.1 | Thale cress | cytosol | 35.4 | 34.07 |
| VIT_14s0128g00190.t01 | Wine grape | cytosol | 30.62 | 34.06 |
| CDY66563 | Canola | cytosol | 25.13 | 32.95 |
| Bra023702.1-P | Field mustard | cytosol | 34.16 | 32.11 |
| CDY40701 | Canola | cytosol | 24.6 | 32.1 |
| CDY71877 | Canola | cytosol | 24.42 | 32.02 |
| Bra040643.1-P | Field mustard | cytosol | 31.5 | 32.01 |
| PGSC0003DMT400083194 | Potato | cytosol | 31.86 | 31.86 |
| CDY18788 | Canola | cytosol | 29.56 | 31.63 |
| KRG96856 | Soybean | cytosol | 25.49 | 31.58 |
| CDY47193 | Canola | cytosol | 26.55 | 31.58 |
| CDY18766 | Canola | cytosol | 31.33 | 31.44 |
| KRH68586 | Soybean | cytosol | 25.84 | 31.2 |
| CDX92558 | Canola | cytosol | 30.8 | 31.18 |
| AT3G05220.1 | Thale cress | cytosol | 31.68 | 31.02 |
| CDY58340 | Canola | cytosol | 25.13 | 30.94 |
| CDY27785 | Canola | cytosol | 30.27 | 30.7 |
| KRG92825 | Soybean | cytosol | 28.67 | 30.57 |
| Bra039452.1-P | Field mustard | cytosol | 32.39 | 30.2 |
| CDY05234 | Canola | nucleus | 13.27 | 30.12 |
| Bra001184.1-P | Field mustard | cytosol | 25.13 | 30.08 |
| Bra001140.1-P | Field mustard | cytosol, mitochondrion | 27.79 | 30.08 |
| KRH33969 | Soybean | cytosol | 29.73 | 30.0 |
| CDY71358 | Canola | nucleus | 12.57 | 29.71 |
| Bra002209.1-P | Field mustard | cytosol, peroxisome, plastid, vacuole | 33.63 | 28.66 |
| CDY05147 | Canola | cytosol | 24.78 | 28.57 |
| CDY24716 | Canola | cytosol | 13.63 | 27.3 |
| TraesCS2A01G114900.1 | Wheat | cytosol | 16.28 | 26.9 |
| TraesCS3A01G048000.1 | Wheat | cytosol | 18.58 | 25.24 |
| TraesCS5A01G030900.2 | Wheat | cytosol | 15.04 | 25.22 |
| TraesCS1A01G232800.1 | Wheat | cytosol | 12.92 | 23.93 |
| TraesCS1A01G091600.1 | Wheat | endoplasmic reticulum, plastid | 16.64 | 23.62 |
| TraesCS3A01G452100.1 | Wheat | cytosol | 12.57 | 21.26 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum | 12.21 | 20.85 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G184700.1 | EnsemblPlantsGene:TraesCS4A01G184700 | Gene3D:3.30.70.100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 |
| ncoils:Coil | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF175 | PFAM:PF00403 | PFscan:PS50846 | SEG:seg |
| SUPFAM:SSF55008 | TIGR:cd00371 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr4A:-:463923382..463925340
Molecular Weight (calculated)
58800.4 Da
IEP (calculated)
8.737
GRAVY (calculated)
-0.884
Length
565 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKEDVLKIQ TCVLKVNIHC DGCQKKVKKI LSKIDGVYQS TIDPEEGKVM VSGLVDPDTI IKKLNKGGKP AVLWGSKPAG VANQFQKLNL DGSGGGGKGQ
101: QPKDAGGKAH KGGGKDAKMA MPQPTPQQIQ QMQQQMQMKG APTPQQLQQL QQQMQMKGAP TPQQLQQLQQ QMQMKGAPTP QQMQQLQQQM QMKGAPTPQQ
201: LQQLQQQMQM KGLKLPPQFM GGAPAKMPFP AGAPAKDPKS VKFNLPEDGW GDDGGSEFDD EFDEFDDDED YDDEGFEDDY YDDPKMMMKQ MAMPPNAGGG
301: DKKGAGNGGK KGGGGNEIPV QIKGNGNNGG GKKDAGGKQQ HQGGNGNGNG GGKNGGGGGQ PNNVKGGGAP VQGKKGGGAG GPAPGMGGPM GGGMPPPQQA
401: MFRPNMMGGA GFPGMGGPMG HPHAASGAQA GRAMQGMPPA GVYQGAGGGG GGGMPSGAEM LQAAAAAGNP MAQQQYMQLI QQQQQQQQMA MLQQQQQQQQ
501: QMMMMNGGHG GGAGGYPQMG YGPGYGRPPM GSYPMPTAYA MPPQPPAGEP YNYFSDEDPN SCSVM
101: QPKDAGGKAH KGGGKDAKMA MPQPTPQQIQ QMQQQMQMKG APTPQQLQQL QQQMQMKGAP TPQQLQQLQQ QMQMKGAPTP QQMQQLQQQM QMKGAPTPQQ
201: LQQLQQQMQM KGLKLPPQFM GGAPAKMPFP AGAPAKDPKS VKFNLPEDGW GDDGGSEFDD EFDEFDDDED YDDEGFEDDY YDDPKMMMKQ MAMPPNAGGG
301: DKKGAGNGGK KGGGGNEIPV QIKGNGNNGG GKKDAGGKQQ HQGGNGNGNG GGKNGGGGGQ PNNVKGGGAP VQGKKGGGAG GPAPGMGGPM GGGMPPPQQA
401: MFRPNMMGGA GFPGMGGPMG HPHAASGAQA GRAMQGMPPA GVYQGAGGGG GGGMPSGAEM LQAAAAAGNP MAQQQYMQLI QQQQQQQQMA MLQQQQQQQQ
501: QMMMMNGGHG GGAGGYPQMG YGPGYGRPPM GSYPMPTAYA MPPQPPAGEP YNYFSDEDPN SCSVM
001: MNKQDVMKLQ TCVLKVNVHC EGCKHKVKKQ LQKIEGVYSV KADVEQGRVT VTGNIDPALL VKKLSKSGKH AEILGGGGGG GGGGGKGFPN LNGQFANLNM
101: GGNNKPKGGK ESNQVKGKAG GGGGGGQNHG HGQPMQLNPQ QIQQMMMMKA AHGGGGGGQM KMPPMAAKDQ KKSVKFADDE DDEFSEDDYD DEDFSEDDYD
201: DDEFDDDEDD DDEMGHGHGH GGGGGNHMPP NKMMMPNKMM PQMGGHHGNG GGPKGPNEIM MMMNGFKGGG GGGKKGGGGG FEIPVQMKGM GEGKNGKDGK
301: KGKGGEKGKK EGKENKGGGK TGKTDAKSGG GGLLGFFKKG KSGNGDEKKS AGKKDGHGGN KVKSHGGGGG VQHYDSGPKK GGGGTKGGGH GGLDIDELMK
401: HSKGGGGGGN KGNHNHSAKG IGGGPMGPGG PMGPGGPMGQ GGPMGMMGPG GPMSMMGPGG PMGPMGGQGG SYPAVQGLPM SGGGGYYPGP PQASQQMNQQ
501: QYMQMMMNQQ QQQQQQQQAV AHGGYGGGHG GDMYHPMMYA RPYPAVNYAH PPPMPPPHSD SYTHMFSDEN PGSCSIM
101: GGNNKPKGGK ESNQVKGKAG GGGGGGQNHG HGQPMQLNPQ QIQQMMMMKA AHGGGGGGQM KMPPMAAKDQ KKSVKFADDE DDEFSEDDYD DEDFSEDDYD
201: DDEFDDDEDD DDEMGHGHGH GGGGGNHMPP NKMMMPNKMM PQMGGHHGNG GGPKGPNEIM MMMNGFKGGG GGGKKGGGGG FEIPVQMKGM GEGKNGKDGK
301: KGKGGEKGKK EGKENKGGGK TGKTDAKSGG GGLLGFFKKG KSGNGDEKKS AGKKDGHGGN KVKSHGGGGG VQHYDSGPKK GGGGTKGGGH GGLDIDELMK
401: HSKGGGGGGN KGNHNHSAKG IGGGPMGPGG PMGPGGPMGQ GGPMGMMGPG GPMSMMGPGG PMGPMGGQGG SYPAVQGLPM SGGGGYYPGP PQASQQMNQQ
501: QYMQMMMNQQ QQQQQQQQAV AHGGYGGGHG GDMYHPMMYA RPYPAVNYAH PPPMPPPHSD SYTHMFSDEN PGSCSIM
Arabidopsis Description
HIPP34Heavy metal-associated isoprenylated plant protein 34 [Source:UniProtKB/Swiss-Prot;Acc:Q0WV37]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.