Factsheet for Bra001184.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71877	Canola	cytosol	87.29	95.59
CDY58340	Canola	cytosol	90.47	93.03
Bra020774.1-P	Field mustard	cytosol	65.47	63.98
KRH11382	Soybean	cytosol	51.06	48.98
KRH51031	Soybean	cytosol	50.21	48.37
Bra023702.1-P	Field mustard	cytosol	59.53	46.76
KRH20903	Soybean	cytosol	49.58	46.52
KRH02117	Soybean	cytosol	49.15	46.49
VIT_05s0020g02690.t01	Wine grape	cytosol	47.03	45.21
GSMUA_Achr8P00190_001	Banana	cytosol	23.52	42.05
Solyc01g080070.2.1	Tomato	cytosol	37.71	41.88
Bra002209.1-P	Field mustard	cytosol, peroxisome, plastid, vacuole	56.78	40.42
GSMUA_Achr10P...	Banana	cytosol	34.11	38.42
GSMUA_Achr3P09060_001	Banana	cytosol, mitochondrion, nucleus	32.42	37.87
PGSC0003DMT400083194	Potato	cytosol	44.7	37.35
GSMUA_Achr8P21830_001	Banana	endoplasmic reticulum	32.2	36.1
GSMUA_Achr8P08580_001	Banana	cytosol	29.03	35.68
GSMUA_Achr11P...	Banana	cytosol, extracellular	18.01	35.27
GSMUA_Achr8P00380_001	Banana	cytosol	30.3	34.88
GSMUA_Achr11P...	Banana	cytosol	26.27	33.07
Zm00001d017393_P001	Maize	plastid	11.65	32.74
TraesCS5A01G133900.1	Wheat	cytosol	35.59	32.25
TraesCS5D01G141600.1	Wheat	cytosol	35.38	31.87
TraesCS5B01G131600.1	Wheat	cytosol	34.75	31.6
Os12t0144600-01	Rice	cytosol	34.75	31.3
Os11t0147500-01	Rice	cytosol	33.9	31.07
Bra001140.1-P	Field mustard	cytosol, mitochondrion	34.32	31.03
Bra040643.1-P	Field mustard	cytosol	35.81	30.4
Bra039452.1-P	Field mustard	cytosol	36.65	28.55
HORVU5Hr1G040920.2	Barley	cytosol	28.6	28.48
EES15655	Sorghum	cytosol	33.9	28.37
Zm00001d023372_P001	Maize	cytosol	33.05	28.31
Zm00001d053438_P002	Maize	cytosol	28.81	27.76
EES04840	Sorghum	cytosol	28.6	27.61
Zm00001d016149_P001	Maize	cytosol	27.54	27.6
Bra024557.1-P	Field mustard	cytosol	20.34	26.89
OQU79299	Sorghum	cytosol	22.25	26.85
Zm00001d004931_P001	Maize	cytosol, nucleus, plasma membrane	29.24	25.79
TraesCS4B01G134000.1	Wheat	cytosol, mitochondrion, nucleus	30.93	25.57
TraesCS4A01G184700.1	Wheat	cytosol, mitochondrion, nucleus	30.08	25.13
TraesCS4D01G128900.1	Wheat	cytosol, mitochondrion, nucleus	31.36	25.08
Bra020580.1-P	Field mustard	nucleus	18.43	24.23
HORVU4Hr1G025770.8	Barley	endoplasmic reticulum	30.51	23.84
OQU82864	Sorghum	cytosol	23.52	23.57
Bra027947.1-P	Field mustard	nucleus	17.16	22.95
EES07966	Sorghum	cytosol, nucleus, peroxisome	24.36	22.91
Bra028156.1-P	Field mustard	cytosol	11.65	22.82
KXG27723	Sorghum	nucleus	27.97	22.18
GSMUA_Achr11P...	Banana	endoplasmic reticulum	13.35	19.03

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.1	EnsemblPlantsGene:Bra001184	EnsemblPlants:Bra001184.1	EnsemblPlants:Bra001184.1-P	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005618	GO:GO:0005623	GO:GO:0006810	GO:GO:0008150
GO:GO:0030001	GO:GO:0030312	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121
UniProt:M4CAF5	PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF134	SUPFAM:SSF55008
UniParc:UPI0002540AA9	SEG:seg	:	:	:	:

Description

AT3G06130 (E=2e-045) | heavy-metal-associated domain-containing protein

Coordinates

chrA03:-:15188243..15189854

Molecular Weight (calculated)

49945.0 Da

IEP (calculated)

6.321

GRAVY (calculated)

-0.829

Length

472 amino acids

Sequence
(BLAST)

001: MSKEEFMNIQ TCVLKVNIHC EGCKQKVKKI LQKIEGVFTT KIDADQGKVT VSVSRSVDPS VLIEKLAKSG KHAEVWGAPK GNNNPNQSHD SHLVNQLKEM
101: QIDNKKGSGG KNNNNDKCPK NVGSGGGSSN PHQIQKMKGL QDMKLPQQLK DLKGSFPENK NQNQPGAKFN VPEEEDDYFS DDDDEFTDAG DEDSDDDEFD
201: DLPSPSNKMM MPNNQQMMMN ANLGGGPTKN GGKGVYGGGK GEPNGGGGGK VDSGGAGNQN QGGGKNGGQN ANGVHQQDGK NGGGPNVGKK LNGGGGGLPA
301: GFIPMGGGVP PNISMPIGGL MGMGDPMGNI PAGLCPMGGA GPSNMTMPIG GLMGMGGLMG NIPAVHGLPA TGASGIPPGY FQRAGPDPIQ MQHQQQQQQY
401: LAAVMNQQRA MENERFQPMM YARPPLAVNY MPPHIHLHQY PNPYDPYPYP PHGNDQYSHV SNEENTSSCD IM

Best Arabidopsis Sequence Match ( AT3G06130.2 )
(BLAST)

001: MSKEEFMKIQ TCVLKVNIHC DGCKQKVKKI LQKIEGVFTT KIDSEQGKVT VSGSVDPSVL IKKLAKSGKH AEIWGAPKGN NNPNQSQMAN QFKGMQIDHG
101: KAGGGGGGNN NNNKKGQKNG GGGGGGGGGG NSNAPKMGQQ LNPQHLQQLQ QLQKMKGFQD LKLPPQLKGS VPVNKNQNQK GVKFDVPEDD DDDDFSDEFD
201: DEFTDDDDDE FDDEFDDLPL PSNKMKPNMT MMPNAQQMMM NAQKNANLAG GPAKNGGKGA PAAGGGGAGG GKGAGGGAKG GPGNQNQGGG KNGGGGHPQD
301: GKNGGGGGGP NAGKKATTTA IFSGGYEPAT SYGERTVPTN DVRKATTGS

Arabidopsis Description

HIPP32Heavy metal-associated isoprenylated plant protein 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8K5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.