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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY05148 Canola cytosol 4.35 37.78
GSMUA_Achr8P00190_001 Banana cytosol 21.23 31.44
GSMUA_Achr11P... Banana cytosol, extracellular 18.41 29.88
TraesCS5D01G141600.1 Wheat cytosol 39.9 29.77
TraesCS5B01G131600.1 Wheat cytosol 39.39 29.67
TraesCS5A01G133900.1 Wheat cytosol 39.39 29.56
Os11t0147500-01 Rice cytosol 38.87 29.51
EES04840 Sorghum cytosol 36.57 29.24
Os12t0144600-01 Rice cytosol 39.13 29.2
EES15655 Sorghum cytosol 40.66 28.19
HORVU5Hr1G040920.2 Barley cytosol 33.76 27.85
GSMUA_Achr11P... Banana cytosol 25.32 26.4
GSMUA_Achr10P... Banana cytosol 27.62 25.78
GSMUA_Achr8P00380_001 Banana cytosol 26.85 25.61
GSMUA_Achr8P08580_001 Banana cytosol 25.06 25.52
Solyc01g080070.2.1 Tomato cytosol 27.37 25.18
GSMUA_Achr3P09060_001 Banana cytosol, mitochondrion, nucleus 25.83 25.0
KRH11382 Soybean cytosol 31.46 25.0
AT3G06130.1 Thale cress cytosol 29.67 24.52
Solyc01g098760.2.1 Tomato cytosol 26.34 24.12
VIT_05s0020g02690.t01 Wine grape cytosol 30.18 24.03
GSMUA_Achr8P21830_001 Banana endoplasmic reticulum 25.83 23.99
KRH20903 Soybean cytosol 30.69 23.86
KRH02117 Soybean cytosol 29.92 23.45
Bra020774.1-P Field mustard cytosol 28.9 23.4
CDY71877 Canola cytosol 25.58 23.2
PGSC0003DMT400073578 Potato cytosol 25.83 23.17
KRH51031 Soybean cytosol 28.9 23.06
EES07966 Sorghum cytosol, nucleus, peroxisome 29.41 22.91
CDY58340 Canola cytosol 26.85 22.88
OQU82864 Sorghum cytosol 27.37 22.72
CDY13960 Canola cytosol 28.39 22.42
Bra001184.1-P Field mustard cytosol 26.85 22.25
PGSC0003DMT400083194 Potato cytosol 31.2 21.59
EES17720 Sorghum nucleus 20.46 21.56
CDY40701 Canola cytosol 23.79 21.48
VIT_14s0128g00190.t01 Wine grape cytosol 27.88 21.46
CDY66563 Canola cytosol 23.53 21.35
KRH68586 Soybean cytosol 25.32 21.15
KXG27723 Sorghum nucleus 31.97 21.01
OQU90456 Sorghum cytosol 18.67 20.98
KRG96856 Soybean cytosol 24.3 20.83
CDY24716 Canola cytosol 14.58 20.21
AT5G19090.1 Thale cress cytosol 29.16 19.42
CDY71358 Canola nucleus 11.76 19.25
KRG92825 Soybean cytosol 26.09 19.25
Bra040643.1-P Field mustard cytosol 27.37 19.24
Bra023702.1-P Field mustard cytosol 29.41 19.13
KRH33969 Soybean cytosol 26.85 18.75
CDY47193 Canola cytosol 22.76 18.74
CDX92558 Canola cytosol 26.6 18.64
Bra001140.1-P Field mustard cytosol, mitochondrion 24.81 18.58
CDY18766 Canola cytosol 26.6 18.47
CDY18788 Canola cytosol 24.81 18.37
AT3G05220.1 Thale cress cytosol 27.11 18.37
CDY27785 Canola cytosol 25.32 17.77
CDY05234 Canola nucleus 11.25 17.67
KXG39397 Sorghum cytosol 18.93 17.37
Bra039452.1-P Field mustard cytosol 26.85 17.33
Bra002209.1-P Field mustard cytosol, peroxisome, plastid, vacuole 28.39 16.74
CDY05147 Canola cytosol 19.95 15.92
GSMUA_Achr11P... Banana endoplasmic reticulum 13.04 15.41
EES02570 Sorghum cytosol 17.14 14.99
KXG34066 Sorghum cytosol, plastid 14.58 13.73
Protein Annotations
EnsemblPlants:OQU79299EnsemblPlantsGene:SORBI_3008G126400Gene3D:3.30.70.100GO:GO:0003674GO:GO:0005488GO:GO:0006810
GO:GO:0008150GO:GO:0030001GO:GO:0046872InterPro:HMA_domInterPro:HMA_dom_sfInterPro:IPR006121
PANTHER:PTHR22814PANTHER:PTHR22814:SF278PFAM:PF00403PFscan:PS50846ProteinID:OQU79299ProteinID:OQU79299.1
SEG:segSUPFAM:SSF55008UniParc:UPI000B8B9ED6UniProt:A0A1Z5R6U5MapMan:35.2:
Description
hypothetical protein
Coordinates
chr8:+:55060714..55063713
Molecular Weight (calculated)
41716.1 Da
IEP (calculated)
9.046
GRAVY (calculated)
-0.656
Length
391 amino acids
Sequence
(BLAST)
001: MLKETILTVQ TCDLKVDINC DGCVKRIKKI LHKIDGVYQT NVNRQQGKLT VTGLMDMDTV FKKLKKAGMS AQLWEDADSS AVSKHQKLQL GGSDMGDQLK
101: DASGKGLPQG EASSSGGGCA AGSSGGTNDA TMMLPQLTPL EQHLQNIQQQ IEQRLTLKGE KLPPHIMGMP PVINRGGKQS DKKIGGGTKV LVPGNANNDN
201: KKDVGTKLYQ DAGGSQVKNG GTGQLPHNLG SLNNHSQAKT DISIGVGSQM MGGSMAPQKR GMMRPTNNMN GPSSFPNMGE TGGMSMGPYT QMGGYNMQSS
301: YGGSAVHGLG MPANSLPRDG YYPSGAGSSR SEIIQQVAKK PMLQQPYMMG DNNGHGRLQQ QYPPPMYYPM PLPPQHDNIF SDEDPDICSS M
Best Arabidopsis Sequence Match ( AT3G06130.1 )
(BLAST)
001: MSKEEFMKIQ TCVLKVNIHC DGCKQKVKKI LQKIEGVFTT KIDSEQGKVT VSGSVDPSVL IKKLAKSGKH AEIWGAPKGN NNPNQSQMAN QFKGMQIDHG
101: KAGGGGGGNN NNNKKGQKNG GGGGGGGGGG NSNAPKMGQQ LNPQHLQQLQ QLQKMKGFQD LKLPPQLKGS VPVNKNQNQK GVKFDVPEDD DDDDFSDEFD
201: DEFTDDDDDE FDDEFDDLPL PSNKMKPNMT MMPNAQQMMM NAQKNANLAG GPAKNGGKGA PAAGGGGAGG GKGAGGGAKG GPGNQNQGGG KNGGGGHPQD
301: GKNGGGGGGP NAGKKGNGGG GPMAGGVSGG FRPMGGGGPQ NMSMPMGGQM GMGGPMGNMP AVQGLPATGP GGAPQGYFQG AGIDPMQMQQ QQQQQQYLAA
401: VMNQQRAMGN ERFQPMMYAR PPPAVNYMPP NPHQYPNPHP YPYPYPYPYP PPYGNDQYSH AFSDENTSSC DIM
Arabidopsis Description
HIPP32Heavy metal-associated isoprenylated plant protein 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8K5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.