Factsheet for Solyc01g080070.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400083194	Potato	cytosol	95.06	71.5
KRH11382	Soybean	cytosol	56.24	48.58
VIT_05s0020g02690.t01	Wine grape	cytosol	54.82	47.45
KRH51031	Soybean	cytosol	54.59	47.35
KRH20903	Soybean	cytosol	55.29	46.72
KRH02117	Soybean	cytosol	52.71	44.89
AT3G06130.1	Thale cress	cytosol	48.71	43.76
GSMUA_Achr11P...	Banana	cytosol, extracellular	24.47	43.15
GSMUA_Achr8P00190_001	Banana	cytosol	26.35	42.42
Bra020774.1-P	Field mustard	cytosol	48.0	42.24
CDY71877	Canola	cytosol	41.65	41.07
CDY13960	Canola	cytosol	47.06	40.4
GSMUA_Achr3P09060_001	Banana	cytosol, mitochondrion, nucleus	38.35	40.35
Solyc01g098760.2.1	Tomato	cytosol	40.47	40.28
CDY58340	Canola	cytosol	41.65	38.56
GSMUA_Achr8P08580_001	Banana	cytosol	34.12	37.76
Bra001184.1-P	Field mustard	cytosol	41.88	37.71
Zm00001d017393_P001	Maize	plastid	14.82	37.5
AT5G19090.1	Thale cress	cytosol	51.06	36.97
CDY47193	Canola	cytosol	41.18	36.84
GSMUA_Achr8P00380_001	Banana	cytosol	35.53	36.83
GSMUA_Achr11P...	Banana	cytosol	32.47	36.8
Bra023702.1-P	Field mustard	cytosol	51.06	36.11
TraesCS5A01G133900.1	Wheat	cytosol	43.53	35.51
GSMUA_Achr10P...	Banana	cytosol	34.82	35.32
TraesCS5D01G141600.1	Wheat	cytosol	43.53	35.31
TraesCS5B01G131600.1	Wheat	cytosol	43.06	35.26
CDX92558	Canola	cytosol	46.12	35.13
CDY24716	Canola	cytosol	23.29	35.11
Os11t0147500-01	Rice	cytosol	41.18	33.98
CDY71358	Canola	nucleus	19.06	33.89
CDY05234	Canola	nucleus	19.76	33.73
Os12t0144600-01	Rice	cytosol	41.18	33.4
GSMUA_Achr8P21830_001	Banana	endoplasmic reticulum	32.24	32.54
HORVU5Hr1G040920.2	Barley	cytosol	35.53	31.86
Bra002209.1-P	Field mustard	cytosol, peroxisome, plastid, vacuole	49.41	31.67
EES04840	Sorghum	cytosol	35.76	31.08
Zm00001d016149_P001	Maize	cytosol	34.35	31.0
Zm00001d053438_P002	Maize	cytosol	35.53	30.82
EES15655	Sorghum	cytosol	37.88	28.55
TraesCS4B01G134000.1	Wheat	cytosol, mitochondrion, nucleus	38.12	28.37
TraesCS4A01G184700.1	Wheat	cytosol, mitochondrion, nucleus	37.41	28.14
TraesCS4D01G128900.1	Wheat	cytosol, mitochondrion, nucleus	38.59	27.8
Zm00001d023372_P001	Maize	cytosol	35.76	27.59
OQU79299	Sorghum	cytosol	25.18	27.37
HORVU4Hr1G025770.8	Barley	endoplasmic reticulum	37.18	26.16
Zm00001d004931_P001	Maize	cytosol, nucleus, plasma membrane	32.0	25.42
Solyc01g066880.2.1	Tomato	cytosol	18.12	24.52
Solyc02g091310.1.1	Tomato	cytosol	19.76	23.6
Solyc01g099600.2.1	Tomato	cytosol	19.53	22.13
OQU82864	Sorghum	cytosol	24.47	22.08
KXG27723	Sorghum	nucleus	29.41	21.01
EES07966	Sorghum	cytosol, nucleus, peroxisome	24.47	20.72
GSMUA_Achr11P...	Banana	endoplasmic reticulum	13.88	17.82
Solyc05g008300.1.1	Tomato	mitochondrion	8.71	13.6

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987	GO:GO:0019725
GO:GO:0030001	GO:GO:0046872	GO:GO:0046914	GO:GO:0046916	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:IPR006121	UniProt:K4AXQ2	PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF278
SUPFAM:SSF55008	EnsemblPlantsGene:Solyc01g080070.2	EnsemblPlants:Solyc01g080070.2.1	UniParc:UPI000276214B	SEG:seg	:

Description

No Description!

Coordinates

chr1:-:79221852..79224527

Molecular Weight (calculated)

44875.2 Da

IEP (calculated)

7.113

GRAVY (calculated)

-0.954

Length

425 amino acids

Sequence
(BLAST)

001: MSKEEFLKIQ TCVLKVNIHC DGCKHKVKKI LQKIEGVYKT NIDSEQGKVT VSGNVEAATL IKKLAKSGKH AELWGAPKAV NNQQNQHNNG KGGNNKGQGQ
101: VQVQKGGNNQ PKGGGGGGGG AQMPNQQQLQ QLKNLQDLKL PPQFKDLKLP PMGKDQNPKA VKFTMPEVDD LTDDDFDEDD LTDDEDDDFD EDELDDELDD
201: IPVKMKGMMG PGAGGAAQMK LPMMGGNGGG GGAQMKPPMM GGNPGAQMKQ MMGGNGGGGQ MPNMMMMNGQ HPQLMKGGNG GNNGGNNGGG GNGKKGGGNV
301: PVQINMGGNN GGKKGGGNGG NPNQGGGPPA QKGGGYFQGA GPEVMAGNPY YQQQQMAAMM MQQQQQRANG NERFQPMMYA RPPPAVNYMP PPAPYNPYYY
401: GHPPPPSDNY STFFSDENTN SCSVM

Best Arabidopsis Sequence Match ( AT3G06130.1 )
(BLAST)

001: MSKEEFMKIQ TCVLKVNIHC DGCKQKVKKI LQKIEGVFTT KIDSEQGKVT VSGSVDPSVL IKKLAKSGKH AEIWGAPKGN NNPNQSQMAN QFKGMQIDHG
101: KAGGGGGGNN NNNKKGQKNG GGGGGGGGGG NSNAPKMGQQ LNPQHLQQLQ QLQKMKGFQD LKLPPQLKGS VPVNKNQNQK GVKFDVPEDD DDDDFSDEFD
201: DEFTDDDDDE FDDEFDDLPL PSNKMKPNMT MMPNAQQMMM NAQKNANLAG GPAKNGGKGA PAAGGGGAGG GKGAGGGAKG GPGNQNQGGG KNGGGGHPQD
301: GKNGGGGGGP NAGKKGNGGG GPMAGGVSGG FRPMGGGGPQ NMSMPMGGQM GMGGPMGNMP AVQGLPATGP GGAPQGYFQG AGIDPMQMQQ QQQQQQYLAA
401: VMNQQRAMGN ERFQPMMYAR PPPAVNYMPP NPHQYPNPHP YPYPYPYPYP PPYGNDQYSH AFSDENTSSC DIM

Arabidopsis Description

HIPP32Heavy metal-associated isoprenylated plant protein 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8K5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.