Factsheet for Solyc05g008300.1.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400078487	Potato	cytosol	90.44	59.42
VIT_01s0011g04710.t01	Wine grape	cytosol	45.96	32.05
KRG90987	Soybean	nucleus	44.85	29.98
KRH35767	Soybean	nucleus	43.75	29.24
Bra024557.1-P	Field mustard	cytosol	26.47	20.17
CDY21409	Canola	cytosol	26.47	20.17
CDY04749	Canola	cytosol	26.1	19.94
GSMUA_Achr7P12020_001	Banana	cytosol	23.16	18.0
GSMUA_Achr10P...	Banana	cytosol	22.79	17.82
AT1G23000.2	Thale cress	cytosol	25.74	16.75
GSMUA_Achr9P19310_001	Banana	cytosol	23.16	16.2
GSMUA_Achr8P31620_001	Banana	cytosol	22.43	16.09
Os01t0125600-01	Rice	cytosol	24.63	15.95
TraesCS3D01G031400.1	Wheat	cytosol	23.53	15.5
TraesCS3A01G048000.1	Wheat	cytosol	23.53	15.38
HORVU3Hr1G004420.1	Barley	nucleus	23.53	14.95
EES02570	Sorghum	cytosol	24.26	14.77
GSMUA_Achr1P23080_001	Banana	cytosol	17.28	14.64
GSMUA_Achr3P01290_001	Banana	cytosol	19.85	14.56
GSMUA_Achr2P22760_001	Banana	cytosol	18.75	14.53
TraesCS3B01G034100.1	Wheat	cytosol	22.43	14.52
Zm00001d040040_P001	Maize	cytosol	23.53	13.85
Zm00001d008515_P001	Maize	cytosol	22.79	13.39
Solyc01g098760.2.1	Tomato	cytosol	15.44	9.84
Solyc01g080070.2.1	Tomato	cytosol	13.6	8.71
Solyc01g099600.2.1	Tomato	cytosol	11.76	8.53
Solyc01g066880.2.1	Tomato	cytosol	7.35	6.37
Solyc02g091310.1.1	Tomato	cytosol	6.99	5.34

Protein Annotations

EnsemblPlants:Solyc05g008300.1.1	EnsemblPlantsGene:Solyc05g008300.1	PANTHER:PTHR22814	PANTHER:PTHR22814:SF150	SEG:seg	UniParc:UPI0002766296
UniProt:K4BX04	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr5:-:2673136..2673954

Molecular Weight (calculated)

29082.0 Da

IEP (calculated)

9.877

GRAVY (calculated)

-0.768

Length

272 amino acids

Sequence
(BLAST)

001: MRFVRDGPRQ MAILRQQAEA NKKKAMAAAM ANGKGNNNNV AAHGKKTGPS PNMPMKANPG GGGIDQRAIH AMKMNMNGAA SAAQLGPNVN LNEAAKIGMV
101: GGNDLNSMMN LAGFHGNNNN GTTTTTTNNN NNVAAFLNAG GFQGHQNNAI PGSLSTGGHH HPSSASMLMN MNNGGQQQQY NPAQMLMNFQ NRHAMQHQQQ
201: QPQMMYNRSP FVPPSTGYYY NNTNNNYGQV PYTTYADPYY YTSAAAAAAN ADQSATNTHM FSDENPSSCS IM

Best Arabidopsis Sequence Match ( AT3G05220.2 )
(BLAST)

001: MGGNNKPKGG KESNQVKGKA GGGGGGGQNH GHGQPMQLNP QQIQQMMMMK AAHGGGGGGQ MKMPPMAAKD QKKSVKFADD EDDEFSEDDY DDEDFSEDDY
101: DDDEFDDDED DDDEMGHGHG HGGGGGNHMP PNKMMMPNKM MPQMGGHHGN GGGPKGPNEI MMMMNGFKGG GGGGKKGGGG GFEIPVQMKG MGEGKNGKDG
201: KKGKGGEKGK KEGKENKGGG KTGKTDAKSG GGGLLGFFKK GKSGNGDEKK SAGKKDGHGG NKVKSHGGGG GVQHYDSGPK KGGGGTKGGG HGGLDIDELM
301: KHSKGGGGGG NKGNHNHSAK GIGGGPMGPG GPMGPGGPMG QGGPMGMMGP GGPMSMMGPG GPMGPMGGQG GSYPAVQGLP MSGGGGYYPG PPQASQQMNQ
401: QQYMQMMMNQ QQQQQQQQQA VAHGGYGGGH GGDMYHPMMY ARPYPAVNYA HPPPMPPPHS DSYTHMFSDE NPGSCSIM

Arabidopsis Description

HIPP34Heavy metal-associated isoprenylated plant protein 34 [Source:UniProtKB/Swiss-Prot;Acc:Q0WV37]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.