Factsheet for TraesCS3A01G048000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G031400.1	Wheat	cytosol	94.47	95.16
TraesCS3B01G034100.1	Wheat	cytosol	94.47	93.57
HORVU3Hr1G004420.1	Barley	nucleus	84.13	81.78
Os01t0125600-01	Rice	cytosol	76.2	75.48
EES02570	Sorghum	cytosol	72.12	67.11
Zm00001d040040_P001	Maize	cytosol	72.36	65.15
Zm00001d008515_P001	Maize	cytosol	66.11	59.4
GSMUA_Achr3P01290_001	Banana	cytosol	42.31	47.44
GSMUA_Achr10P...	Banana	cytosol	39.18	46.84
GSMUA_Achr7P12020_001	Banana	cytosol	38.7	46.0
GSMUA_Achr2P22760_001	Banana	cytosol	37.98	45.01
VIT_01s0011g04710.t01	Wine grape	cytosol	39.66	42.31
KRG90987	Soybean	nucleus	38.94	39.8
KRH35767	Soybean	nucleus	38.7	39.56
CDY04749	Canola	cytosol	31.25	36.52
CDY21409	Canola	cytosol	30.77	35.85
Bra024557.1-P	Field mustard	cytosol	30.53	35.57
PGSC0003DMT400078487	Potato	cytosol	33.89	34.06
VIT_14s0006g01780.t01	Wine grape	extracellular	14.9	31.47
AT1G23000.2	Thale cress	cytosol	30.77	30.62
CDY01696	Canola	cytosol	14.18	24.58
AT5G37860.1	Thale cress	nucleus	14.9	23.66
Solyc05g008300.1.1	Tomato	mitochondrion	15.38	23.53
TraesCS5A01G133900.1	Wheat	cytosol	28.85	23.03
Bra028156.1-P	Field mustard	cytosol	13.22	22.82
TraesCS2A01G114900.1	Wheat	cytosol	18.51	22.51
CDX74552	Canola	cytosol	12.74	22.46
PGSC0003DMT400078636	Potato	cytosol	17.79	20.79
Solyc02g091310.1.1	Tomato	cytosol	17.79	20.79
TraesCS5A01G030900.2	Wheat	cytosol	16.35	20.18
TraesCS1A01G232800.1	Wheat	cytosol	14.66	20.0
TraesCS3A01G452100.1	Wheat	cytosol	15.38	19.16
TraesCS4A01G184700.1	Wheat	cytosol, mitochondrion, nucleus	25.24	18.58
TraesCS1A01G091600.1	Wheat	endoplasmic reticulum, plastid	16.59	17.34

Protein Annotations

EnsemblPlants:TraesCS3A01G048000.1	EnsemblPlantsGene:TraesCS3A01G048000	Gene3D:3.30.70.100	GO:GO:0003674	GO:GO:0005488	GO:GO:0006810
GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121
ncoils:Coil	PANTHER:PTHR22814	PANTHER:PTHR22814:SF150	PFAM:PF00403	PFscan:PS50846	SEG:seg
SUPFAM:SSF55008	TIGR:cd00371	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr3A:-:25498863..25500937

Molecular Weight (calculated)

44243.3 Da

IEP (calculated)

7.539

GRAVY (calculated)

-0.979

Length

416 amino acids

Sequence
(BLAST)

001: MTKDEDFKLV KIQTHVLRVN IHCDGCKHKV KKLLQKIEGV YSVAIDVDNH KVTVTGSVDS ETLIRKLTRG GKHAELWSHQ KGGSGNNNQG HKGNGNNNNN
101: QQKQQQQQQQ QQQKQAANVS KDGGGKGSGG QKEQGKLGGG VGSLMQGLKA FKSQHSKHQL PDLSSDDEDD MYDDEDDEDD DEFDDEYEDD LRFLGDKMSQ
201: LGILRQRAEA AAAINAKNKN GGNAANVGGK KGAPAGNNHH QNNQNQKMNM GAAAGNAKMG NGAQKNTGGI GGLMGLNHGL GAGGAAPGIQ GYTGGGFSHP
301: SSYGAAGYGG LQQQQQNGNL MASMQGYHNN PAAAAAMMNN LRGNMMMHQP QPQPQMMYHR SPQISPYTAY YNPYSYYYQQ PGGGGGGGSS AYHPGGGTGD
401: VETMFSDENT KGCAIM

Best Arabidopsis Sequence Match ( AT5G19090.1 )
(BLAST)

001: MSKEEFMKIQ TCVLKVNIHC DGCKQKVKKI LQKIEGVFTT KIDAELGKVT VSGNVDPSVL IKKLLKSGKH AEIWGAPKGG SNNNQNQPNL ANQFKAMQID
101: HGGKGGGGGG GGPANNNKGQ KIGGGGGGGG GGGGGGGGGP PKMVIPQLTP QQMQQLNPQQ LQQLQQLQQM KGFQDLKLPP QLKGGPGPGP GSVPMNKNPQ
201: MPNNPNQKAV KFNVPDDDDE EDFSDEFDDE FDEDDDEFDD DLEDDEFDDH PPPPNKMKPM MGGGNMIMPN NMMPNMMMPN AQQMLNAHKN GGGPGPAGGK
301: IEGKGMPFPV QMGGGGGGPG GKKGGPGGGG GNMGNQNQGG GGKNGGKGGG GHPLDGKMGG GGGGPNGNKG GGGVQMNGGP NGGKKGGGGG GGGGGGPMSG
401: GLPPGFRPMG GGGGGGGGPQ SMSMPMGGAM GGPMGSLPQM GGGPGPMSNN MQAVQGLPAM GPGGGGGGGP SAEAPPGYFQ GQVSGNGGGG QDSMPGNPYL
501: QQQQQQQQQQ YLAAVMNQQR SMGNERFQPM MYARPPPAVN YMPPQPQPHQ QHPYPYPYPY PPQYPPHNGD QYSDYFNDEN TSSCNIM

Arabidopsis Description

HIPP33Heavy metal-associated isoprenylated plant protein 33 [Source:UniProtKB/Swiss-Prot;Acc:F4JZL7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.