Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028156.1-P | Field mustard | cytosol | 96.61 | 94.61 |
| CDY01696 | Canola | cytosol | 96.19 | 94.58 |
| AT5G37860.1 | Thale cress | nucleus | 78.81 | 70.99 |
| VIT_14s0006g01780.t01 | Wine grape | extracellular | 21.61 | 25.89 |
| Solyc02g091310.1.1 | Tomato | cytosol | 24.15 | 16.01 |
| CDY53573 | Canola | nucleus | 23.31 | 15.8 |
| CDY41724 | Canola | nucleus | 23.31 | 15.58 |
| PGSC0003DMT400078636 | Potato | cytosol | 23.31 | 15.45 |
| GSMUA_Achr1P23080_001 | Banana | cytosol | 20.34 | 14.95 |
| GSMUA_Achr7P12020_001 | Banana | cytosol | 21.19 | 14.29 |
| GSMUA_Achr3P01290_001 | Banana | cytosol | 22.46 | 14.29 |
| GSMUA_Achr2P22760_001 | Banana | cytosol | 21.19 | 14.24 |
| CDY24716 | Canola | cytosol | 16.95 | 14.18 |
| CDY04749 | Canola | cytosol | 21.19 | 14.04 |
| CDY21409 | Canola | cytosol | 21.19 | 14.01 |
| GSMUA_Achr8P31620_001 | Banana | cytosol | 22.46 | 13.98 |
| GSMUA_Achr10P... | Banana | cytosol | 20.34 | 13.79 |
| CDY05566 | Canola | nucleus | 20.76 | 13.73 |
| CDY71877 | Canola | cytosol | 25.0 | 13.69 |
| CDY25027 | Canola | cytosol | 20.76 | 13.57 |
| CDY66563 | Canola | cytosol | 23.73 | 12.99 |
| CDY40701 | Canola | cytosol | 23.73 | 12.93 |
| CDY58340 | Canola | cytosol | 25.0 | 12.85 |
| TraesCS3D01G031400.1 | Wheat | cytosol | 22.46 | 12.83 |
| EES02570 | Sorghum | cytosol | 24.15 | 12.75 |
| TraesCS3A01G048000.1 | Wheat | cytosol | 22.46 | 12.74 |
| Os01t0125600-01 | Rice | cytosol | 22.46 | 12.62 |
| CDY47193 | Canola | cytosol | 25.0 | 12.42 |
| TraesCS3B01G034100.1 | Wheat | cytosol | 22.03 | 12.38 |
| GSMUA_Achr9P19310_001 | Banana | cytosol | 20.34 | 12.34 |
| CDY13960 | Canola | cytosol | 24.58 | 11.72 |
| Zm00001d040040_P001 | Maize | cytosol | 22.88 | 11.69 |
| Zm00001d008515_P001 | Maize | cytosol | 22.46 | 11.45 |
| CDX92558 | Canola | cytosol | 25.42 | 10.75 |
| CDY18788 | Canola | cytosol | 23.73 | 10.61 |
| CDY05147 | Canola | cytosol | 21.19 | 10.2 |
| CDY18766 | Canola | cytosol | 24.15 | 10.12 |
| CDY27785 | Canola | cytosol | 23.73 | 10.05 |
| HORVU3Hr1G004420.1 | Barley | nucleus | 17.8 | 9.81 |
| CDY05148 | Canola | cytosol | 1.69 | 8.89 |
| CDY05234 | Canola | nucleus | 7.2 | 6.83 |
| CDY71358 | Canola | nucleus | 5.51 | 5.44 |
Protein Annotations
| EnsemblPlants:CDX74552 | EnsemblPlantsGene:GSBRNA2T00114474001 | Gene3D:3.30.70.100 | GO:A0A078CCI9 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf |
| InterPro:IPR006121 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF134 | PFAM:PF00403 | PFscan:PS50846 | ProteinID:CDX74552 |
| ProteinID:CDX74552.1 | SEG:seg | SUPFAM:SSF55008 | UniParc:UPI0004EE8528 | MapMan:35.2 | : |
Description
BnaA04g08370D
Coordinates
chrLK031801:+:1348616..1349525
Molecular Weight (calculated)
27609.8 Da
IEP (calculated)
6.862
GRAVY (calculated)
-0.830
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKSRMPRNV YEPLKTYFLK VNINCHGCNR KVKKTLRKVE GVYSVDIDAD QQAVIVRGNL DPEILVKKLN SRGKYAELLF MSAFHGNHHD NRSLRNAPYN
101: FGNNHFNNVP SYERQSDGEM MKMMMANNMK PVMMNDADYF QMSDSSEDFQ ELFGETAQRH NYDEEVHPNL MRDMELGYSN AYPAAETMNM HIPERSNNTM
201: MNERSFHGQM MNGPSLVPQF MNQEQFSARQ LHGFYY
101: FGNNHFNNVP SYERQSDGEM MKMMMANNMK PVMMNDADYF QMSDSSEDFQ ELFGETAQRH NYDEEVHPNL MRDMELGYSN AYPAAETMNM HIPERSNNTM
201: MNERSFHGQM MNGPSLVPQF MNQEQFSARQ LHGFYY
001: MPRNVYEPLK TYFLKVNINC QGCKMKVKKT LRKIEGVYSV DIDTDQEAVI VRGNLDPEIL VKKLNKRGKH AQLMFLTPYH KDQYFGNHQA VLNHDNRSLG
101: NTQYNFGSNH NNVPSYERLN HQSDEEMMMM MNMKPVMMND ADYFEMSDSP EDFQELFGEI PQRHNNYEDV KPNLMRDMDL GYSNAYPAAE TMNMQIGGRV
201: NNMMVNERGF HGQMMNERGF HGQMMNGPSL VPQSMNHEQF SSRPVQSMNQ QFSSRPVHGF YY
101: NTQYNFGSNH NNVPSYERLN HQSDEEMMMM MNMKPVMMND ADYFEMSDSP EDFQELFGEI PQRHNNYEDV KPNLMRDMDL GYSNAYPAAE TMNMQIGGRV
201: NNMMVNERGF HGQMMNERGF HGQMMNGPSL VPQSMNHEQF SSRPVQSMNQ QFSSRPVHGF YY
Arabidopsis Description
Copper-binding family protein [Source:UniProtKB/TrEMBL;Acc:Q4PSD8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.