Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P31620_001 | Banana | cytosol | 76.32 | 64.64 |
| GSMUA_Achr9P19310_001 | Banana | cytosol | 72.59 | 59.9 |
| GSMUA_Achr3P01290_001 | Banana | cytosol | 48.6 | 42.05 |
| GSMUA_Achr7P12020_001 | Banana | cytosol | 44.55 | 40.86 |
| GSMUA_Achr10P... | Banana | cytosol | 43.3 | 39.94 |
| GSMUA_Achr2P22760_001 | Banana | cytosol | 42.06 | 38.46 |
| VIT_01s0011g04710.t01 | Wine grape | cytosol | 45.17 | 37.18 |
| KRH35767 | Soybean | nucleus | 44.55 | 35.14 |
| KRG90987 | Soybean | nucleus | 44.55 | 35.14 |
| GSMUA_Achr8P00190_001 | Banana | cytosol | 25.23 | 30.68 |
| VIT_14s0006g01780.t01 | Wine grape | extracellular | 18.69 | 30.46 |
| CDY04749 | Canola | cytosol | 33.02 | 29.78 |
| CDY21409 | Canola | cytosol | 33.02 | 29.69 |
| PGSC0003DMT400078487 | Potato | cytosol | 38.01 | 29.47 |
| Bra024557.1-P | Field mustard | cytosol | 32.71 | 29.41 |
| GSMUA_Achr1P24670_001 | Banana | cytosol | 23.05 | 25.26 |
| AT1G23000.2 | Thale cress | cytosol | 32.71 | 25.12 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum | 18.38 | 24.69 |
| GSMUA_Achr11P... | Banana | cytosol, extracellular | 18.07 | 24.07 |
| GSMUA_Achr11P... | Banana | cytosol | 18.69 | 24.0 |
| GSMUA_Achr3P09060_001 | Banana | cytosol, mitochondrion, nucleus | 29.91 | 23.76 |
| GSMUA_Achr8P08580_001 | Banana | cytosol | 27.73 | 23.18 |
| GSMUA_Achr2P02310_001 | Banana | cytosol | 18.69 | 23.08 |
| GSMUA_Achr10P... | Banana | cytosol | 29.59 | 22.67 |
| GSMUA_Achr8P00380_001 | Banana | cytosol | 28.66 | 22.44 |
| GSMUA_Achr11P... | Banana | cytosol | 26.17 | 22.4 |
| GSMUA_AchrUn_... | Banana | plastid | 15.89 | 22.37 |
| GSMUA_Achr8P21830_001 | Banana | endoplasmic reticulum | 28.66 | 21.85 |
| CDY01696 | Canola | cytosol | 15.58 | 20.83 |
| GSMUA_Achr5P21400_001 | Banana | cytosol | 19.63 | 20.66 |
| AT5G37860.1 | Thale cress | nucleus | 16.82 | 20.61 |
| CDX74552 | Canola | cytosol | 14.95 | 20.34 |
| Solyc02g091310.1.1 | Tomato | cytosol | 22.43 | 20.22 |
| Bra028156.1-P | Field mustard | cytosol | 14.95 | 19.92 |
| GSMUA_Achr11P... | Banana | cytosol | 19.94 | 19.81 |
| PGSC0003DMT400078636 | Potato | cytosol | 21.81 | 19.66 |
| GSMUA_Achr9P30980_001 | Banana | cytosol | 17.76 | 19.0 |
| Solyc05g008300.1.1 | Tomato | mitochondrion | 14.64 | 17.28 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum | 16.2 | 15.71 |
| GSMUA_Achr8P10080_001 | Banana | endoplasmic reticulum | 19.63 | 15.07 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P23080_001 | EnsemblPlants:GSMUA_Achr1T23080_001 | EnsemblPlantsGene:GSMUA_Achr1G23080_001 | Gene3D:3.30.70.100 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf |
| InterPro:IPR006121 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF150 | PFAM:PF00403 | PFscan:PS50846 | SEG:seg |
| SUPFAM:SSF55008 | UniParc:UPI0002966BC1 | UniProt:M0S2B6 | MapMan:35.1 | : | : |
Description
Chloroplast-targeted copper chaperone, putative [Source:GMGC_GENE;Acc:GSMUA_Achr1G23080_001]
Coordinates
chr1:+:17341995..17344037
Molecular Weight (calculated)
35158.0 Da
IEP (calculated)
7.922
GRAVY (calculated)
-0.968
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MNKSEEFKLL KIQTVILKVH IHCDGCKQQV KKLLQRIEGV YTVSIDAEHQ KVTVSGDVDS NTLIKKLARS GKHAEVWPQK TNNQSSKPNQ QQQQGGKDGN
101: KNNKGQGQGG QANQALIQGL REFKNQHNRM EPLSSDDEEF DDDFDEEEDD ELGFLGEKMK QLNISKQANN AVTAATAAGA KKNGGNNNIG GGKKVGGNPN
201: QAIGLKGPNG SEPKGSYTAS DNKMVNGAPL CGGNQSAGQG YQNQTPSTMM NLRGINHSSS NNMLMNESRY MQPQVMYNRS PQIPPYTAYY YPCPYYQSPY
301: VSHHHSDTGL SDENTSSCVV M
101: KNNKGQGQGG QANQALIQGL REFKNQHNRM EPLSSDDEEF DDDFDEEEDD ELGFLGEKMK QLNISKQANN AVTAATAAGA KKNGGNNNIG GGKKVGGNPN
201: QAIGLKGPNG SEPKGSYTAS DNKMVNGAPL CGGNQSAGQG YQNQTPSTMM NLRGINHSSS NNMLMNESRY MQPQVMYNRS PQIPPYTAYY YPCPYYQSPY
301: VSHHHSDTGL SDENTSSCVV M
001: MTKDEDFKLL KIQTFSLRVN IHCEGCNKKV KKLLQRIEGV CHVKIEAEHQ KVTVSGSVDS ATLINKLVKA GKHAELWSPN PNQNQPQKPK TNDFIKNVNQ
101: KGQKQGSAKS GIEACKPKNG PKGAAFVAEE DGDGSEEEDG DVQFPKPANQ QQQQNVVNAK KNSGGAAMNN GNNGVNAASK KVNQKQSNHN QNTQQVMAAM
201: RMRTAGKMST GVEANEIGAL MGLAGFNGAT NAVNHPPNGI QQQLQAPPLN NVNGVTNHNL TNSNGGMMMN MNGYNNHHPM NMQSRQMMHQ PQQMMYQRSS
301: FVPASSNGYY YNYTPSPYSY YPYYPYASDQ YQQQSSHSHA TNMSSEEDAG NNNSCNIM
101: KGQKQGSAKS GIEACKPKNG PKGAAFVAEE DGDGSEEEDG DVQFPKPANQ QQQQNVVNAK KNSGGAAMNN GNNGVNAASK KVNQKQSNHN QNTQQVMAAM
201: RMRTAGKMST GVEANEIGAL MGLAGFNGAT NAVNHPPNGI QQQLQAPPLN NVNGVTNHNL TNSNGGMMMN MNGYNNHHPM NMQSRQMMHQ PQQMMYQRSS
301: FVPASSNGYY YNYTPSPYSY YPYYPYASDQ YQQQSSHSHA TNMSSEEDAG NNNSCNIM
Arabidopsis Description
Heavy metal transport/detoxification superfamily protein [Source:TAIR;Acc:AT1G23000]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.