Factsheet for GSMUA_Achr2P02310_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P30980_001	Banana	cytosol	66.54	57.67
GSMUA_Achr11P...	Banana	cytosol	40.77	42.4
VIT_07s0005g00050.t01	Wine grape	cytosol	36.54	35.45
GSMUA_Achr11P...	Banana	endoplasmic reticulum	28.08	30.54
KRG96418	Soybean	cytosol	34.23	30.27
GSMUA_AchrUn_...	Banana	plastid	26.54	30.26
KRH68159	Soybean	cytosol	32.31	28.67
GSMUA_Achr5P21400_001	Banana	cytosol	32.31	27.54
GSMUA_Achr11P...	Banana	cytosol	33.08	26.63
GSMUA_Achr8P00190_001	Banana	cytosol	26.54	26.14
GSMUA_Achr1P24670_001	Banana	cytosol	28.46	25.26
GSMUA_Achr11P...	Banana	cytosol, extracellular	20.77	22.41
GSMUA_Achr8P10080_001	Banana	endoplasmic reticulum	35.38	22.01
GSMUA_Achr11P...	Banana	cytosol	28.08	19.47
GSMUA_Achr2P22760_001	Banana	cytosol	26.15	19.37
GSMUA_Achr3P01290_001	Banana	cytosol	27.31	19.14
GSMUA_Achr8P08580_001	Banana	cytosol	28.08	19.01
GSMUA_Achr1P23080_001	Banana	cytosol	23.08	18.69
GSMUA_Achr10P...	Banana	cytosol	30.0	18.62
GSMUA_Achr3P09060_001	Banana	cytosol, mitochondrion, nucleus	28.46	18.32
GSMUA_Achr8P00380_001	Banana	cytosol	28.85	18.29
GSMUA_Achr10P...	Banana	cytosol	24.23	18.1
GSMUA_Achr7P12020_001	Banana	cytosol	23.46	17.43
GSMUA_Achr8P31620_001	Banana	cytosol	24.62	16.89
GSMUA_Achr8P21830_001	Banana	endoplasmic reticulum	26.54	16.39
GSMUA_Achr11P...	Banana	endoplasmic reticulum	20.77	16.31
GSMUA_Achr9P19310_001	Banana	cytosol	23.85	15.94

Protein Annotations

EnsemblPlants:GSMUA_Achr2P02310_001	EnsemblPlants:GSMUA_Achr2T02310_001	EnsemblPlantsGene:GSMUA_Achr2G02310_001	Gene3D:3.30.70.100	GO:GO:0003674	GO:GO:0005488
GO:GO:0006810	GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:IPR006121	PANTHER:PTHR22814	PANTHER:PTHR22814:SF75	PFAM:PF00403	PFscan:PS50846	SEG:seg
SUPFAM:SSF55008	UniParc:UPI0002957E59	UniProt:M0S4H2	MapMan:35.1	:	:

Description

Putative Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G02310_001]

Coordinates

chr2:-:8169317..8170578

Molecular Weight (calculated)

27232.9 Da

IEP (calculated)

8.030

GRAVY (calculated)

-0.692

Length

260 amino acids

Sequence
(BLAST)

001: MAEAKECSET LKYQTLILKV SIHCEGCKKK VKKVLQSMEG VYKTTVDPQQ HKVVVTGNVA AEILIKKLLK AGKHAELWPE TKPMETGGGG GMSNGKDDST
101: QVSDKPESEA SKNGSKEPPP PPEKEDEGNK SAATEGGGKK KGKKGQKENS NSNNDNKSGS ASGGGGGSAT EVEVAPQEAS KKAGASGGVA IPPTFNFPVY
201: TTSQLPSYLV SYNSMQPSMS HGGAYYTALP MLQSSYIYST ASPCSCYTCS DENSGACSIM

Best Arabidopsis Sequence Match ( AT5G27690.1 )
(BLAST)

001: MDLGTEIKSD TRQEEQRHVF EDYPEPLRYT TWVLRVSIHC EGCKRKIKKI LSKIDGVYTT NIDVKQQKVT VIGNVEPEIL IKKIMKAGRH AELWPTSMEN
101: NINNDCNYQK KPKKDNEETS GDEDDDENNN NNNGGGDVGG GGGGGGGNFD QVKQVVTFVN GQLQPQGDGA PKKKKKKKKK KKSLGNTTVV MEGGGGGGGG
201: GGPPQNDGPP ETVIYSAPQD HHIIHGPPPH LHHHQQQNHP YPTVHSPPRH HPQQMYGPGP GLPPPSFYHT QPQTAPSYTV SYNTVHGPIN NGGNETASYY
301: TAPPSHPTSY YSYEYVDTGY ESPPPEFYSY RSQPSESFES LSEGNPNSCC VM

Arabidopsis Description

HIPP36Heavy metal-associated isoprenylated plant protein 36 [Source:UniProtKB/Swiss-Prot;Acc:Q84J88]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.