Factsheet for GSMUA_Achr9P30980_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P02310_001	Banana	cytosol	57.67	66.54
GSMUA_Achr11P...	Banana	cytosol	32.67	39.2
VIT_07s0005g00050.t01	Wine grape	cytosol	30.67	34.33
KRG96418	Soybean	cytosol	29.67	30.27
KRH68159	Soybean	cytosol	29.33	30.03
GSMUA_Achr11P...	Banana	endoplasmic reticulum	22.67	28.45
GSMUA_AchrUn_...	Banana	plastid	21.33	28.07
GSMUA_Achr5P21400_001	Banana	cytosol	26.67	26.23
GSMUA_Achr11P...	Banana	cytosol	28.0	26.01
GSMUA_Achr8P00190_001	Banana	cytosol	21.67	24.62
GSMUA_Achr1P24670_001	Banana	cytosol	23.0	23.55
GSMUA_Achr11P...	Banana	cytosol, extracellular	18.0	22.41
GSMUA_Achr8P10080_001	Banana	endoplasmic reticulum	28.67	20.57
GSMUA_Achr8P08580_001	Banana	cytosol	25.33	19.79
GSMUA_Achr11P...	Banana	cytosol	23.67	18.93
GSMUA_Achr8P00380_001	Banana	cytosol	25.33	18.54
GSMUA_Achr10P...	Banana	cytosol	25.67	18.38
GSMUA_Achr3P09060_001	Banana	cytosol, mitochondrion, nucleus	24.67	18.32
GSMUA_Achr3P01290_001	Banana	cytosol	22.0	17.79
GSMUA_Achr1P23080_001	Banana	cytosol	19.0	17.76
GSMUA_Achr7P12020_001	Banana	cytosol	20.33	17.43
GSMUA_Achr10P...	Banana	cytosol	20.0	17.24
GSMUA_Achr8P21830_001	Banana	endoplasmic reticulum	24.0	17.1
GSMUA_Achr8P31620_001	Banana	cytosol	21.33	16.89
GSMUA_Achr2P22760_001	Banana	cytosol	19.67	16.81
GSMUA_Achr11P...	Banana	endoplasmic reticulum	17.67	16.01
GSMUA_Achr9P19310_001	Banana	cytosol	18.33	14.14

Protein Annotations

EnsemblPlants:GSMUA_Achr9P30980_001	EnsemblPlants:GSMUA_Achr9T30980_001	EnsemblPlantsGene:GSMUA_Achr9G30980_001	Gene3D:3.30.70.100	GO:GO:0003674	GO:GO:0005488
GO:GO:0006810	GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:IPR006121	PANTHER:PTHR22814	PANTHER:PTHR22814:SF265	PFAM:PF00403	PFscan:PS50846	SEG:seg
SUPFAM:SSF55008	UniParc:UPI0002965A45	UniProt:M0U505	MapMan:35.1	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G30980_001]

Coordinates

chr9:+:34040815..34045208

Molecular Weight (calculated)

31898.8 Da

IEP (calculated)

9.905

GRAVY (calculated)

-0.770

Length

300 amino acids

Sequence
(BLAST)

001: MAAAGECAEP LKYQTWILKV SIHCEGCRKK VKKVLQSMEG VYKTTVDPQQ HKVIVTGNVE ADILIKKLLK AGKHAELWPE KKGTGDGLRS GAGSSNSKKN
101: KNKNGDKPNK PSESVDNNQI SPATDVPSHA SRKPEGEASK NGGKKSTPPP EKKEGGKAPI TGEGGKKKDK GGQNGNNNSN SNNKNKNGSG NSGGCAAEAE
201: VAPQEASKKT VSGGGAAIPP AAFNFPVYST PQVPSYLVSY NSMQPTMSYG GAYYSAPLPI MQNSCTVEQT QLRFIIPCRM ETETSLRIEK DLSVVIHLCK

Best Arabidopsis Sequence Match ( AT5G27690.1 )
(BLAST)

001: MDLGTEIKSD TRQEEQRHVF EDYPEPLRYT TWVLRVSIHC EGCKRKIKKI LSKIDGVYTT NIDVKQQKVT VIGNVEPEIL IKKIMKAGRH AELWPTSMEN
101: NINNDCNYQK KPKKDNEETS GDEDDDENNN NNNGGGDVGG GGGGGGGNFD QVKQVVTFVN GQLQPQGDGA PKKKKKKKKK KKSLGNTTVV MEGGGGGGGG
201: GGPPQNDGPP ETVIYSAPQD HHIIHGPPPH LHHHQQQNHP YPTVHSPPRH HPQQMYGPGP GLPPPSFYHT QPQTAPSYTV SYNTVHGPIN NGGNETASYY
301: TAPPSHPTSY YSYEYVDTGY ESPPPEFYSY RSQPSESFES LSEGNPNSCC VM

Arabidopsis Description

HIPP36Heavy metal-associated isoprenylated plant protein 36 [Source:UniProtKB/Swiss-Prot;Acc:Q84J88]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.