Factsheet for GSMUA_Achr3P01290_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P22760_001	Banana	cytosol	60.38	63.82
GSMUA_Achr7P12020_001	Banana	cytosol	55.53	58.86
GSMUA_Achr10P...	Banana	cytosol	54.45	58.05
GSMUA_Achr1P23080_001	Banana	cytosol	42.05	48.6
GSMUA_Achr8P31620_001	Banana	cytosol	47.98	46.97
GSMUA_Achr9P19310_001	Banana	cytosol	45.28	43.19
Os01t0125600-01	Rice	cytosol	47.98	42.38
TraesCS3A01G048000.1	Wheat	cytosol	47.44	42.31
TraesCS3D01G031400.1	Wheat	cytosol	46.9	42.13
TraesCS3B01G034100.1	Wheat	cytosol	46.9	41.43
VIT_01s0011g04710.t01	Wine grape	cytosol	42.86	40.77
EES02570	Sorghum	cytosol	46.36	38.48
KRH35767	Soybean	nucleus	40.43	36.85
Zm00001d040040_P001	Maize	cytosol	45.82	36.8
KRG90987	Soybean	nucleus	39.89	36.36
Zm00001d008515_P001	Maize	cytosol	44.47	35.64
HORVU3Hr1G004420.1	Barley	nucleus	40.97	35.51
CDY04749	Canola	cytosol	33.69	35.11
CDY21409	Canola	cytosol	33.42	34.73
Bra024557.1-P	Field mustard	cytosol	32.88	34.17
PGSC0003DMT400078487	Potato	cytosol	36.66	32.85
GSMUA_Achr8P00190_001	Banana	cytosol	22.91	32.2
VIT_14s0006g01780.t01	Wine grape	extracellular	16.71	31.47
AT1G23000.2	Thale cress	cytosol	34.5	30.62
GSMUA_Achr11P...	Banana	cytosol	19.14	28.4
GSMUA_Achr2P02310_001	Banana	cytosol	19.14	27.31
GSMUA_Achr11P...	Banana	endoplasmic reticulum	17.25	26.78
GSMUA_Achr1P24670_001	Banana	cytosol	20.49	25.94
GSMUA_AchrUn_...	Banana	plastid	15.9	25.88
GSMUA_Achr3P09060_001	Banana	cytosol, mitochondrion, nucleus	28.03	25.74
GSMUA_Achr8P08580_001	Banana	cytosol	26.15	25.26
GSMUA_Achr10P...	Banana	cytosol	28.03	24.82
GSMUA_Achr11P...	Banana	cytosol	24.8	24.53
GSMUA_Achr8P00380_001	Banana	cytosol	26.95	24.39
GSMUA_Achr8P21830_001	Banana	endoplasmic reticulum	27.49	24.23
GSMUA_Achr11P...	Banana	cytosol, extracellular	15.63	24.07
CDY01696	Canola	cytosol	15.36	23.75
CDX74552	Canola	cytosol	14.29	22.46
Bra028156.1-P	Field mustard	cytosol	14.56	22.41
GSMUA_Achr9P30980_001	Banana	cytosol	17.79	22.0
AT5G37860.1	Thale cress	nucleus	15.36	21.76
PGSC0003DMT400078636	Potato	cytosol	20.75	21.63
Solyc02g091310.1.1	Tomato	cytosol	20.22	21.07
GSMUA_Achr5P21400_001	Banana	cytosol	17.25	20.98
GSMUA_Achr11P...	Banana	cytosol	18.06	20.74
Solyc05g008300.1.1	Tomato	mitochondrion	14.56	19.85
GSMUA_Achr8P10080_001	Banana	endoplasmic reticulum	17.52	15.55
GSMUA_Achr11P...	Banana	endoplasmic reticulum	13.48	15.11

Protein Annotations

EnsemblPlants:GSMUA_Achr3P01290_001	EnsemblPlants:GSMUA_Achr3T01290_001	EnsemblPlantsGene:GSMUA_Achr3G01290_001	Gene3D:3.30.70.100	GO:GO:0003674	GO:GO:0005488
GO:GO:0006810	GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:IPR006121	ncoils:Coil	PANTHER:PTHR22814	PANTHER:PTHR22814:SF150	PFAM:PF00403	PFscan:PS50846
SEG:seg	SUPFAM:SSF55008	UniParc:UPI000294B422	UniProt:M0SAU7	MapMan:35.1	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G01290_001]

Coordinates

chr3:+:938822..940568

Molecular Weight (calculated)

41202.0 Da

IEP (calculated)

7.085

GRAVY (calculated)

-1.023

Length

371 amino acids

Sequence
(BLAST)

001: MGKGEDFELL KIQTHILKVN IHCDGCKLKV KKLLHRTEGV FSVSIDVEQQ KVTVSGNVDS ETLIRKLIKA RKHAELWTQK INQTQQLNQQ KQQQKKVANP
101: MKDANKNNKE QDKQGLMRGL KAFKNQHNKL SPSSSDEEDF DDDDDDDDED VDYDEEEDDA DMQNLDSKMK QTNFMRQANN APTDAKQSGN GNGKVGANAK
201: IGCNRKGGEN ANENHIKSPN ESQQKGTNAA ANNRVVNGNP KVQGNNGVMG LGPPGLGGTN GCLPGNAFKG YTGHPPQCGG QYQSPVTVNM QGYQTHPSSS
301: MVNNLRGHNM VVHESRYMQP QMMQLRTPQI SPYAGYYNCY PSPYYLSNQV DNGYYGTHLF SDENTNACII M

Best Arabidopsis Sequence Match ( AT1G23000.1 )
(BLAST)

001: MTKDEDFKLL KIQTFSLRVN IHCEGCNKKV KKLLQRIEGV CHVKIEAEHQ KVTVSGSVDS ATLINKLVKA GKHAELWSPN PNQNQPQKPK TNDFIKNVNQ
101: KGQKQGSAKS GIEACKPKNG PKGAAFVAEE DGDGSEEEDG DVQFPKPANQ QQQQNVVNAK KNSGGAAMNN GNNGVNAASK KVNQKQSNHN QNTQQVMAAM
201: RMRTAGKMST GVEANEIGAL MGLAGFNGAT NAVNHPPNGI QQQLQAPPLN NVNGVTNHNL TNSNGGMMMN MNGYNNHHPM NMQSRQMMHQ PQQMMYQRSS
301: FVPASSNGYY YNYTPSPYSY YPYYPYASDQ YQQQSSHSHA TNMSSEEDAG NNNSCNIM

Arabidopsis Description

Heavy metal transport/detoxification superfamily protein [Source:TAIR;Acc:AT1G23000]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.