CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35767	Soybean	nucleus	93.61	93.61
VIT_01s0011g04710.t01	Wine grape	cytosol	67.32	70.26
PGSC0003DMT400078487	Potato	cytosol	53.56	52.66
CDY04749	Canola	cytosol	40.54	46.35
CDY21409	Canola	cytosol	39.56	45.1
Solyc05g008300.1.1	Tomato	mitochondrion	29.98	44.85
Bra024557.1-P	Field mustard	cytosol	39.31	44.82
GSMUA_Achr1P23080_001	Banana	cytosol	35.14	44.55
GSMUA_Achr2P22760_001	Banana	cytosol	36.36	42.17
GSMUA_Achr8P31620_001	Banana	cytosol	38.82	41.69
GSMUA_Achr3P01290_001	Banana	cytosol	36.36	39.89
GSMUA_Achr9P19310_001	Banana	cytosol	38.08	39.85
TraesCS3D01G031400.1	Wheat	cytosol	40.29	39.71
GSMUA_Achr7P12020_001	Banana	cytosol	33.91	39.43
Os01t0125600-01	Rice	cytosol	40.54	39.29
AT1G23000.2	Thale cress	cytosol	40.29	39.23
TraesCS3A01G048000.1	Wheat	cytosol	39.8	38.94
GSMUA_Achr10P...	Banana	cytosol	33.17	38.79
TraesCS3B01G034100.1	Wheat	cytosol	39.56	38.33
EES02570	Sorghum	cytosol	40.29	36.69
Zm00001d040040_P001	Maize	cytosol	40.29	35.5
Zm00001d008515_P001	Maize	cytosol	39.07	34.34
HORVU3Hr1G004420.1	Barley	nucleus	33.17	31.54
KRH11382	Soybean	cytosol	34.64	28.66
KRH51031	Soybean	cytosol	33.17	27.55
KRG96418	Soybean	cytosol	19.66	27.21
KRH20903	Soybean	cytosol	33.42	27.04
KRH68159	Soybean	cytosol	19.16	26.62
KRH02117	Soybean	cytosol	32.43	26.45
KRH68586	Soybean	cytosol	30.22	26.28
KRG96856	Soybean	cytosol	29.24	26.1
KRH37116	Soybean	cytosol	16.71	25.28
KRH02248	Soybean	cytosol	17.69	24.41
KRH50862	Soybean	cytosol	17.44	24.15
KRG92825	Soybean	cytosol	31.2	23.96
KRH33969	Soybean	cytosol	32.19	23.39
KRH68524	Soybean	cytosol	20.15	23.3
KRH33893	Soybean	cytosol	20.39	22.07
KRH12046	Soybean	cytosol	17.44	19.67

Protein Annotations

EntrezGene:100806126	Gene3D:3.30.70.100	MapMan:35.1	EMBL:ACUP02012657	ncoils:Coil	EnsemblPlantsGene:GLYMA_20G126300
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006810	GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0030001	GO:GO:0046872
GO:GO:0046914	GO:GO:0046916	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121	UniProt:K7N344
EnsemblPlants:KRG90987	ProteinID:KRG90987	ProteinID:KRG90987.1	PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814
PANTHER:PTHR22814:SF150	SUPFAM:SSF55008	UniParc:UPI000233F4A6	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr20:+:36847334..36849892

Molecular Weight (calculated)

44234.7 Da

IEP (calculated)

7.927

GRAVY (calculated)

-0.834

Length

407 amino acids

Sequence
(BLAST)

001: MTKEEDFKLL KIQTCVLKVN IHCDGCKQKV KKLLQRIEGV YQVQIDAEQQ KVTVSGSVDS ATLIKKLVRA GKHAELWSQK INQNQKQKNN NAKDDKNKGQ
101: KQALVKGLEA FKNQQKFPAF SSEEDEYYYD DEDDEEDEDE EMRFLREKAN QLQMLKQQTA NANNVRKGMG AIAAGANNGK TNNGDNANSG KKGGPNHQNM
201: GMKDSPNGGL DQKTMAALKF NNGHLGGDGL NLNLGEAKRA NDIGAMMNLA GFNGNNCANN VGSATVLGGN NNSNGLGGFP VQSNNNMIPG SAAAFSNGGL
301: SGGQYPSSLL MNMNGFNNHP SPSPLMMNMN MQQARQAMQQ QPQMMYHRSP FVPPNTGYYY NHSSYSPAHY SYSYGLPSYP AAAGGGDDHS AAHMFSDDNT
401: SSSCSIM

Best Arabidopsis Sequence Match ( AT1G23000.1 )
(BLAST)

001: MTKDEDFKLL KIQTFSLRVN IHCEGCNKKV KKLLQRIEGV CHVKIEAEHQ KVTVSGSVDS ATLINKLVKA GKHAELWSPN PNQNQPQKPK TNDFIKNVNQ
101: KGQKQGSAKS GIEACKPKNG PKGAAFVAEE DGDGSEEEDG DVQFPKPANQ QQQQNVVNAK KNSGGAAMNN GNNGVNAASK KVNQKQSNHN QNTQQVMAAM
201: RMRTAGKMST GVEANEIGAL MGLAGFNGAT NAVNHPPNGI QQQLQAPPLN NVNGVTNHNL TNSNGGMMMN MNGYNNHHPM NMQSRQMMHQ PQQMMYQRSS
301: FVPASSNGYY YNYTPSPYSY YPYYPYASDQ YQQQSSHSHA TNMSSEEDAG NNNSCNIM

Arabidopsis Description

Heavy metal transport/detoxification superfamily protein [Source:TAIR;Acc:AT1G23000]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.