Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G031400.1 | Wheat | cytosol | 94.05 | 95.64 |
| TraesCS3A01G048000.1 | Wheat | cytosol | 93.57 | 94.47 |
| HORVU3Hr1G004420.1 | Barley | nucleus | 82.62 | 81.07 |
| Os01t0125600-01 | Rice | cytosol | 74.76 | 74.76 |
| EES02570 | Sorghum | cytosol | 70.48 | 66.22 |
| Zm00001d040040_P001 | Maize | cytosol | 70.48 | 64.07 |
| Zm00001d008515_P001 | Maize | cytosol | 65.24 | 59.18 |
| GSMUA_Achr7P12020_001 | Banana | cytosol | 39.52 | 47.43 |
| GSMUA_Achr3P01290_001 | Banana | cytosol | 41.43 | 46.9 |
| GSMUA_Achr10P... | Banana | cytosol | 38.81 | 46.84 |
| GSMUA_Achr2P22760_001 | Banana | cytosol | 37.86 | 45.3 |
| VIT_01s0011g04710.t01 | Wine grape | cytosol | 39.29 | 42.31 |
| KRG90987 | Soybean | nucleus | 38.33 | 39.56 |
| KRH35767 | Soybean | nucleus | 38.33 | 39.56 |
| CDY04749 | Canola | cytosol | 30.95 | 36.52 |
| CDY21409 | Canola | cytosol | 30.48 | 35.85 |
| Bra024557.1-P | Field mustard | cytosol | 30.24 | 35.57 |
| PGSC0003DMT400078487 | Potato | cytosol | 33.1 | 33.57 |
| VIT_14s0006g01780.t01 | Wine grape | extracellular | 14.76 | 31.47 |
| AT1G23000.2 | Thale cress | cytosol | 30.71 | 30.86 |
| CDY01696 | Canola | cytosol | 13.81 | 24.17 |
| AT5G37860.1 | Thale cress | nucleus | 14.52 | 23.28 |
| TraesCS5B01G131600.1 | Wheat | cytosol | 28.33 | 22.93 |
| TraesCS1B01G245900.1 | Wheat | cytosol | 16.67 | 22.8 |
| Solyc05g008300.1.1 | Tomato | mitochondrion | 14.52 | 22.43 |
| Bra028156.1-P | Field mustard | cytosol | 12.86 | 22.41 |
| TraesCS7B01G462300.1 | Wheat | cytosol | 12.86 | 22.31 |
| CDX74552 | Canola | cytosol | 12.38 | 22.03 |
| TraesCS2B01G134100.1 | Wheat | cytosol | 17.62 | 21.64 |
| PGSC0003DMT400078636 | Potato | cytosol | 17.86 | 21.07 |
| Solyc02g091310.1.1 | Tomato | cytosol | 17.62 | 20.79 |
| TraesCS5B01G030300.1 | Wheat | cytosol | 16.9 | 20.58 |
| TraesCS4B01G134000.1 | Wheat | cytosol, mitochondrion, nucleus | 26.43 | 19.44 |
| TraesCS3B01G489000.1 | Wheat | cytosol | 14.05 | 17.66 |
| TraesCS1B01G119400.1 | Wheat | cytosol, plastid | 16.9 | 17.53 |
Protein Annotations
| Gene3D:3.30.70.100 | MapMan:35.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 |
| PFAM:PF00403 | PFscan:PS50846 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF150 | SUPFAM:SSF55008 | EnsemblPlantsGene:TraesCS3B01G034100 |
| EnsemblPlants:TraesCS3B01G034100.1 | TIGR:cd00371 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3B:+:16213115..16215231
Molecular Weight (calculated)
44469.5 Da
IEP (calculated)
7.316
GRAVY (calculated)
-0.951
Length
420 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKDEDFKLV KIQTHVLRVN IHCDGCKHKV KKLLQRIEGV YSVAIDVDNH KVTVTGSVDS ETLIRKLTRG GKHAELWSHQ KGGNGGNNNN QGHKGGGGGG
101: NNNQQKQQQQ QQQQKQAANV SKDGGGKGNG GQKEQGKLGG GGVGSLMQGL KAFKSQHSKH QLPELSSDDD DDDMYDDEDD EEDDEFDDEY EDDLRFLGDK
201: MSQLGILRQR AEAAAAINAK NKNAANVGGK KGAPAGNNHH QSNQNQKMNM GAAAGNAKMG NGAPKNTGGI GGLMGLNHGG LGAAGAAPGI QGYTGGGGFS
301: HPSSYGAAGY GGLQQQQQQQ QNGNLMASMQ GYHNNPAAAA AMMNNLRGNM MMHQPQAQPQ MMYHRSPQIS PYTAYYNPYS YYYQQPGGGG GGSSAYHPGA
401: GTGDVETMFS DENTKGCAIM
101: NNNQQKQQQQ QQQQKQAANV SKDGGGKGNG GQKEQGKLGG GGVGSLMQGL KAFKSQHSKH QLPELSSDDD DDDMYDDEDD EEDDEFDDEY EDDLRFLGDK
201: MSQLGILRQR AEAAAAINAK NKNAANVGGK KGAPAGNNHH QSNQNQKMNM GAAAGNAKMG NGAPKNTGGI GGLMGLNHGG LGAAGAAPGI QGYTGGGGFS
301: HPSSYGAAGY GGLQQQQQQQ QNGNLMASMQ GYHNNPAAAA AMMNNLRGNM MMHQPQAQPQ MMYHRSPQIS PYTAYYNPYS YYYQQPGGGG GGSSAYHPGA
401: GTGDVETMFS DENTKGCAIM
001: MPRNVYEPLK TYFLKVNINC QGCKMKVKKT LRKIEGVYSV DIDTDQEAVI VRGNLDPEIL VKKLNKRGKH AQLMFLTPYH KDQYFGNHQA VLNHDNRSLG
101: NTQYNFGSNH NNVPSYERLN HQSDEEMMMM MNMKPVMMND ADYFEMSDSP EDFQELFGEI PQRHNNYEDV KPNLMRDMDL GYSNAYPAAE TMNMQIGGRV
201: NNMMVNERGF HGQMMNERGF HGQMMNGPSL VPQSMNHEQF SSRPVQSMNQ QFSSRPVHGF YY
101: NTQYNFGSNH NNVPSYERLN HQSDEEMMMM MNMKPVMMND ADYFEMSDSP EDFQELFGEI PQRHNNYEDV KPNLMRDMDL GYSNAYPAAE TMNMQIGGRV
201: NNMMVNERGF HGQMMNERGF HGQMMNGPSL VPQSMNHEQF SSRPVQSMNQ QFSSRPVHGF YY
Arabidopsis Description
Copper-binding family protein [Source:UniProtKB/TrEMBL;Acc:Q4PSD8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.