Factsheet for GSMUA_Achr7P12020_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	67.71	68.1
GSMUA_Achr3P01290_001	Banana	cytosol	58.86	55.53
GSMUA_Achr2P22760_001	Banana	cytosol	50.86	50.71
GSMUA_Achr8P31620_001	Banana	cytosol	48.57	44.85
GSMUA_Achr1P23080_001	Banana	cytosol	40.86	44.55
GSMUA_Achr9P19310_001	Banana	cytosol	46.57	41.9
Os01t0125600-01	Rice	cytosol	48.86	40.71
TraesCS3B01G034100.1	Wheat	cytosol	47.43	39.52
TraesCS3D01G031400.1	Wheat	cytosol	46.29	39.23
VIT_01s0011g04710.t01	Wine grape	cytosol	43.14	38.72
TraesCS3A01G048000.1	Wheat	cytosol	46.0	38.7
EES02570	Sorghum	cytosol	46.29	36.24
Zm00001d040040_P001	Maize	cytosol	46.57	35.28
Zm00001d008515_P001	Maize	cytosol	46.0	34.77
KRH35767	Soybean	nucleus	39.43	33.91
KRG90987	Soybean	nucleus	39.43	33.91
HORVU3Hr1G004420.1	Barley	nucleus	40.86	33.41
PGSC0003DMT400078487	Potato	cytosol	39.14	33.09
CDY04749	Canola	cytosol	32.0	31.46
CDY21409	Canola	cytosol	31.43	30.81
Bra024557.1-P	Field mustard	cytosol	31.14	30.53
VIT_14s0006g01780.t01	Wine grape	extracellular	16.86	29.95
GSMUA_Achr8P00190_001	Banana	cytosol	20.86	27.65
AT1G23000.2	Thale cress	cytosol	31.14	26.08
GSMUA_Achr1P24670_001	Banana	cytosol	21.71	25.94
GSMUA_Achr11P...	Banana	cytosol	18.0	25.2
GSMUA_Achr8P08580_001	Banana	cytosol	27.43	25.0
GSMUA_Achr11P...	Banana	cytosol	26.29	24.53
GSMUA_AchrUn_...	Banana	plastid	15.43	23.68
GSMUA_Achr2P02310_001	Banana	cytosol	17.43	23.46
CDY01696	Canola	cytosol	16.0	23.33
GSMUA_Achr11P...	Banana	cytosol, extracellular	16.0	23.24
GSMUA_Achr8P00380_001	Banana	cytosol	27.14	23.17
Solyc05g008300.1.1	Tomato	mitochondrion	18.0	23.16
GSMUA_Achr10P...	Banana	cytosol	27.71	23.15
GSMUA_Achr11P...	Banana	endoplasmic reticulum	15.71	23.01
GSMUA_Achr3P09060_001	Banana	cytosol, mitochondrion, nucleus	26.29	22.77
GSMUA_Achr8P21830_001	Banana	endoplasmic reticulum	26.29	21.85
Bra028156.1-P	Field mustard	cytosol	14.86	21.58
CDX74552	Canola	cytosol	14.29	21.19
GSMUA_Achr5P21400_001	Banana	cytosol	18.0	20.66
GSMUA_Achr9P30980_001	Banana	cytosol	17.43	20.33
PGSC0003DMT400078636	Potato	cytosol	20.29	19.94
Solyc02g091310.1.1	Tomato	cytosol	20.29	19.94
AT5G37860.1	Thale cress	nucleus	14.86	19.85
GSMUA_Achr11P...	Banana	cytosol	16.86	18.27
GSMUA_Achr11P...	Banana	endoplasmic reticulum	15.43	16.31
GSMUA_Achr8P10080_001	Banana	endoplasmic reticulum	17.43	14.59

Protein Annotations

EnsemblPlants:GSMUA_Achr7P12020_001	EnsemblPlants:GSMUA_Achr7T12020_001	EnsemblPlantsGene:GSMUA_Achr7G12020_001	Gene3D:3.30.70.100	GO:GO:0003674	GO:GO:0005488
GO:GO:0006810	GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:IPR006121	PANTHER:PTHR22814	PANTHER:PTHR22814:SF150	PFAM:PF00403	PFscan:PS50846	SEG:seg
SUPFAM:SSF55008	UniParc:UPI0002964E64	UniProt:M0TGU0	MapMan:35.1	:	:

Description

Putative Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G12020_001]

Coordinates

chr7:-:9560885..9562526

Molecular Weight (calculated)

38478.3 Da

IEP (calculated)

9.376

GRAVY (calculated)

-0.924

Length

350 amino acids

Sequence
(BLAST)

001: MGKEEFEVLK LKTHILKVNI HCDGCRLKVK KLLHRIEGVF SVNVDVENQK VTVQGNVDSE TLIRKLTRSG KHAELWSGKA SGDQKNSHSQ QKQVAPPVKD
101: GNKNKKDQGK QDLKAPKHQP KKLSPLSSDE DDDDDGEDDE DVDDEVRLFD KLKQFNLLMQ ANNAAAGAKK NTNGNATGFM GGKKDGANPN QSHMKHPNGS
201: AKKGVNVAAH QKTINTHPSK GEGRRVTDIN GMTGLGLGGL GGNSNGGGFQ GNVFHGYAGL PSHGGGQHQP PMMVNMQGYQ AHPSPMMSNF RVHDNRYMQP
301: QMMHLRSPQI SPYTAYYNCH PSPYLQSNQS YNEYVTHLFS DDNTRGCVVM

Best Arabidopsis Sequence Match ( AT5G19090.2 )
(BLAST)

001: MSKEEFMKIQ TCVLKVNIHC DGCKQKVKKI LQKIEGVFTT KIDAELGKVT VSGNVDPSVL IKKLLKSGKH AEIWGAPKGG SNNNQNQPNL ANQFKAMQID
101: HGGKGGGGGG GGPANNNKGQ KIGGGGGGGG GGGGGGGGGP PKMVIPQLTP QQMQQLNPQQ LQQLQQLQQM KGFQDLKLPP QLKGGPGPGP GSVPMNKNPQ
201: MPNNPNQKAV KFNVPDDDDE EDFSDEFDDE FDEDDDEFDD DLEDDEFDDH PPPPNKMKPM MGGGNMIMPN NMMPNMMMPN AQQMLNAHKN GGGGGGPQSM
301: SMPMGGAMGG PMGSLPQMGG GPGPMSNNMQ AVQGLPAMGP GGGGGGGPSA EAPPGYFQGQ VSGNGGGGQD SMPGNPYLQQ QQQQQQQQYL AAVMNQQRSM
401: GNERFQPMMY ARPPPAVNYM PPQPQPHQQH PYPYPYPYPP QYPPHNGDQY SDYFNDENTS SCNIM

Arabidopsis Description

HIPP33Heavy metal-associated isoprenylated plant protein 33 [Source:UniProtKB/Swiss-Prot;Acc:F4JZL7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.