Factsheet for Bra024557.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21409	Canola	cytosol	99.16	99.16
CDY04749	Canola	cytosol	95.52	95.79
AT1G23000.2	Thale cress	cytosol	79.83	68.18
VIT_01s0011g04710.t01	Wine grape	cytosol	44.82	41.03
KRG90987	Soybean	nucleus	44.82	39.31
KRH35767	Soybean	nucleus	44.26	38.82
PGSC0003DMT400078487	Potato	cytosol	40.9	35.27
GSMUA_Achr3P01290_001	Banana	cytosol	34.17	32.88
GSMUA_Achr1P23080_001	Banana	cytosol	29.41	32.71
GSMUA_Achr7P12020_001	Banana	cytosol	30.53	31.14
GSMUA_Achr8P31620_001	Banana	cytosol	32.77	30.87
TraesCS3A01G048000.1	Wheat	cytosol	35.57	30.53
TraesCS3D01G031400.1	Wheat	cytosol	35.29	30.51
GSMUA_Achr9P19310_001	Banana	cytosol	33.05	30.33
TraesCS3B01G034100.1	Wheat	cytosol	35.57	30.24
GSMUA_Achr2P22760_001	Banana	cytosol	29.69	30.2
GSMUA_Achr10P...	Banana	cytosol	28.29	29.02
Os01t0125600-01	Rice	cytosol	33.89	28.81
Solyc05g008300.1.1	Tomato	mitochondrion	20.17	26.47
EES02570	Sorghum	cytosol	33.05	26.4
Zm00001d040040_P001	Maize	cytosol	33.61	25.97
Zm00001d008515_P001	Maize	cytosol	33.33	25.7
HORVU3Hr1G004420.1	Barley	nucleus	28.57	23.83
Bra001184.1-P	Field mustard	cytosol	26.89	20.34
Bra028156.1-P	Field mustard	cytosol	13.73	20.33
Bra020774.1-P	Field mustard	cytosol	26.89	19.88
Bra027947.1-P	Field mustard	nucleus	19.61	19.83
Bra020580.1-P	Field mustard	nucleus	18.49	18.38
Bra023702.1-P	Field mustard	cytosol	27.17	16.14
Bra002209.1-P	Field mustard	cytosol, peroxisome, plastid, vacuole	27.45	14.78
Bra040643.1-P	Field mustard	cytosol	22.41	14.39
Bra001140.1-P	Field mustard	cytosol, mitochondrion	21.01	14.37
Bra039452.1-P	Field mustard	cytosol	22.97	13.53

Protein Annotations

EnsemblPlants:Bra024557.1	EnsemblPlants:Bra024557.1-P	EnsemblPlantsGene:Bra024557	Gene3D:3.30.70.100	GO:GO:0003674	GO:GO:0005488
GO:GO:0006810	GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:IPR006121	PANTHER:PTHR22814	PANTHER:PTHR22814:SF150	PFAM:PF00403	PFscan:PS50846	SEG:seg
SUPFAM:SSF55008	UniParc:UPI0002542A0F	UniProt:M4E702	MapMan:35.1	:	:

Description

AT1G23000 (E=1e-046) | heavy-metal-associated domain-containing protein

Coordinates

chrA09:-:24430859..24432125

Molecular Weight (calculated)

39238.0 Da

IEP (calculated)

9.289

GRAVY (calculated)

-1.023

Length

357 amino acids

Sequence
(BLAST)

001: MTKDEDFKLL KMQTYSLRVS IHCEGCNKKV KKLLQRIEGV YHVKVEAEHH KVTVSGSVDS ATLINKLLKA GKHAELWSPN PTTNPNQPQK PKTNDVIKSN
101: QKGQKQGSAK SGLETFKPKN NPKGAACVKE EEDEDGGEEE DGEVQLPKAA NQQQQNVKKN SGGGGPMNNG NNGVNASKKV NQKQNSQNQN NSQAMATAMR
201: MRNAAKVNSG VENNEIGALM GLAGFNGAAT NAAVNPQNGI QQLQAPPLNN INSVTTHNMN NGNGGPSMMM NMNGYNPMNM QNRPLMHHHQ PQQMMYQRPA
301: FVPPPSNGYY YNYTPSPYTY YPYYPYPSDQ HQQISHSSAT NMPSDEDTSN NSSCNIM

Best Arabidopsis Sequence Match ( AT1G23000.2 )
(BLAST)

001: MLLLECNLNS KIQNLMRKCG QVAVTFKCQS SLTHSTSFQI SEQKSLNPKP LHLIAYSSKA MTKDEDFKLL KIQTFSLRVN IHCEGCNKKV KKLLQRIEGV
101: CHVKIEAEHQ KVTVSGSVDS ATLINKLVKA GKHAELWSPN PNQNQPQKPK TNDFIKNVNQ KGQKQGSAKS GIEACKPKNG PKGAAFVAEE DGDGSEEEDG
201: DVQFPKPANQ QQQQNVVNAK KNSGGAAMNN GNNGVNAASK KVNQKQSNHN QNTQQVMAAM RMRTAGKMST GVEANEIGAL MGLAGFNGAT NAVNHPPNGI
301: QQQLQAPPLN NVNGVTNHNL TNSNGGMMMN MNGYNNHHPM NMQSRQMMHQ PQQMMYQRSS FVPASSNGYY YNYTPSPYSY YPYYPYASDQ YQQQSSHSHA
401: TNMSSEEDAG NNNSCNIM

Arabidopsis Description

Heavy metal transport/detoxification superfamily protein [Source:TAIR;Acc:AT1G23000]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.