Factsheet for Bra020774.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71358	Canola	nucleus	48.86	98.74
AT3G06130.1	Thale cress	cytosol	84.06	85.84
Bra001184.1-P	Field mustard	cytosol	63.98	65.47
Bra023702.1-P	Field mustard	cytosol	74.53	59.9
KRH51031	Soybean	cytosol	57.35	56.53
KRH11382	Soybean	cytosol	56.94	55.89
KRH02117	Soybean	cytosol	56.31	54.51
Bra002209.1-P	Field mustard	cytosol, peroxisome, plastid, vacuole	74.33	54.15
KRH20903	Soybean	cytosol	55.28	53.08
VIT_05s0020g02690.t01	Wine grape	cytosol	52.59	51.73
Solyc01g080070.2.1	Tomato	cytosol	42.24	48.0
GSMUA_Achr8P00190_001	Banana	cytosol	24.22	44.32
PGSC0003DMT400083194	Potato	cytosol	50.31	43.01
GSMUA_Achr3P09060_001	Banana	cytosol, mitochondrion, nucleus	34.78	41.58
GSMUA_Achr10P...	Banana	cytosol	36.02	41.53
GSMUA_Achr8P00380_001	Banana	cytosol	34.99	41.22
GSMUA_Achr8P08580_001	Banana	cytosol	31.88	40.1
Zm00001d017393_P001	Maize	plastid	13.66	39.29
GSMUA_Achr11P...	Banana	cytosol	30.43	39.2
GSMUA_Achr11P...	Banana	cytosol, extracellular	19.46	39.0
GSMUA_Achr8P21830_001	Banana	endoplasmic reticulum	33.75	38.72
Os11t0147500-01	Rice	cytosol	40.58	38.06
TraesCS5A01G133900.1	Wheat	cytosol	40.79	37.81
TraesCS5D01G141600.1	Wheat	cytosol	40.99	37.79
TraesCS5B01G131600.1	Wheat	cytosol	40.58	37.76
Os12t0144600-01	Rice	cytosol	40.58	37.4
Bra040643.1-P	Field mustard	cytosol	41.2	35.79
Bra001140.1-P	Field mustard	cytosol, mitochondrion	38.51	35.63
Zm00001d016149_P001	Maize	cytosol	33.54	34.39
HORVU5Hr1G040920.2	Barley	cytosol	33.54	34.18
Bra039452.1-P	Field mustard	cytosol	42.65	33.99
EES04840	Sorghum	cytosol	34.37	33.95
Zm00001d053438_P002	Maize	cytosol	34.37	33.88
EES15655	Sorghum	cytosol	37.68	32.27
Zm00001d023372_P001	Maize	cytosol	36.02	31.58
TraesCS4B01G134000.1	Wheat	cytosol, mitochondrion, nucleus	36.65	31.0
TraesCS4A01G184700.1	Wheat	cytosol, mitochondrion, nucleus	36.02	30.8
TraesCS4D01G128900.1	Wheat	cytosol, mitochondrion, nucleus	36.85	30.17
Zm00001d004931_P001	Maize	cytosol, nucleus, plasma membrane	32.3	29.16
OQU79299	Sorghum	cytosol	23.4	28.9
HORVU4Hr1G025770.8	Barley	endoplasmic reticulum	35.82	28.64
Bra024557.1-P	Field mustard	cytosol	19.88	26.89
Bra027947.1-P	Field mustard	nucleus	19.25	26.35
OQU82864	Sorghum	cytosol	25.47	26.11
Bra028156.1-P	Field mustard	cytosol	12.63	25.31
Bra020580.1-P	Field mustard	nucleus	18.43	24.79
KXG27723	Sorghum	nucleus	30.43	24.71
EES07966	Sorghum	cytosol, nucleus, peroxisome	24.84	23.9
GSMUA_Achr11P...	Banana	endoplasmic reticulum	12.84	18.73

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.1	EnsemblPlantsGene:Bra020774	EnsemblPlants:Bra020774.1	EnsemblPlants:Bra020774.1-P	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005618	GO:GO:0005623	GO:GO:0006810	GO:GO:0008150
GO:GO:0030001	GO:GO:0030312	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121
UniProt:M4DW80	PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF134	SUPFAM:SSF55008
UniParc:UPI0002545D91	SEG:seg	:	:	:	:

Description

AT3G06130 (E=4e-052) | heavy-metal-associated domain-containing protein

Coordinates

chrA02:-:23183473..23185144

Molecular Weight (calculated)

49419.0 Da

IEP (calculated)

7.958

GRAVY (calculated)

-0.970

Length

483 amino acids

Sequence
(BLAST)

001: MSKEEFMKIQ TCVLKVNIHC DGCKQKVKKI LQKIEGVFTT KIDSDQGKVT VSGSVDPSVL IKKLAKSGKH AEIWGAPKGN NNNQNQLANQ MKGMQIDNGK
101: GVGGKNNNNN NKGPKNGGGG GGGGGGGGGG GGGGGGNSNA PKMGQQLNPQ QIQQLQQIQK MKGFQDLKLP PQLKDSKGSA PPPNKNQKGV KFDVPEDDDD
201: DDFTDDDEFD DEFTDDDDEF DDDEFGDLPP PSNKMKPNMM MPNAQQMMMN AQKNANLGGK GGPSVGNGGG GGGKGGPGGG GGGKGAPGGG GNQNQGGGKN
301: GGKNGGGGQP QDGGKNGGGP NAGKKGNGGG GGGGGPMAGG LPAGFRPMGG GGPQNMSMPM GGPMGMGGPM GSIPAVQGLP ATGPGGGVPP GYFQGAGPDP
401: MQMQQQQQQQ QYLAAVMNQQ RAIGNERFQP MMYARPPPAV NYMPAHPHQY PNPYPYPYPY PPHGNDQYSH VFSDENTSSC DIM

Best Arabidopsis Sequence Match ( AT3G06130.2 )
(BLAST)

001: MSKEEFMKIQ TCVLKVNIHC DGCKQKVKKI LQKIEGVFTT KIDSEQGKVT VSGSVDPSVL IKKLAKSGKH AEIWGAPKGN NNPNQSQMAN QFKGMQIDHG
101: KAGGGGGGNN NNNKKGQKNG GGGGGGGGGG NSNAPKMGQQ LNPQHLQQLQ QLQKMKGFQD LKLPPQLKGS VPVNKNQNQK GVKFDVPEDD DDDDFSDEFD
201: DEFTDDDDDE FDDEFDDLPL PSNKMKPNMT MMPNAQQMMM NAQKNANLAG GPAKNGGKGA PAAGGGGAGG GKGAGGGAKG GPGNQNQGGG KNGGGGHPQD
301: GKNGGGGGGP NAGKKATTTA IFSGGYEPAT SYGERTVPTN DVRKATTGS

Arabidopsis Description

HIPP32Heavy metal-associated isoprenylated plant protein 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8K5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.