Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 4
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G134000.1 | Wheat | cytosol, mitochondrion, nucleus | 88.74 | 93.87 |
| TraesCS4A01G184700.1 | Wheat | cytosol, mitochondrion, nucleus | 87.09 | 93.1 |
| TraesCS4D01G128900.1 | Wheat | cytosol, mitochondrion, nucleus | 89.07 | 91.19 |
| HORVU5Hr1G040920.2 | Barley | cytosol | 56.29 | 71.73 |
| Zm00001d016149_P001 | Maize | cytosol | 52.32 | 67.09 |
| EES04840 | Sorghum | cytosol | 52.98 | 65.44 |
| Zm00001d053438_P002 | Maize | cytosol | 49.83 | 61.43 |
| EES15655 | Sorghum | cytosol | 54.14 | 57.98 |
| Zm00001d023372_P001 | Maize | cytosol | 52.81 | 57.89 |
| Zm00001d017393_P001 | Maize | plastid | 15.23 | 54.76 |
| Zm00001d004931_P001 | Maize | cytosol, nucleus, plasma membrane | 44.87 | 50.65 |
| CDY05148 | Canola | cytosol | 3.48 | 46.67 |
| EES07966 | Sorghum | cytosol, nucleus, peroxisome | 35.93 | 43.23 |
| GSMUA_Achr11P... | Banana | cytosol | 26.66 | 42.93 |
| GSMUA_Achr11P... | Banana | cytosol, extracellular | 17.05 | 42.74 |
| OQU82864 | Sorghum | cytosol | 33.11 | 42.46 |
| GSMUA_Achr8P08580_001 | Banana | cytosol | 26.49 | 41.67 |
| KXG27723 | Sorghum | nucleus | 40.23 | 40.84 |
| KRH11382 | Soybean | cytosol | 32.62 | 40.04 |
| GSMUA_Achr8P00380_001 | Banana | cytosol | 27.15 | 40.0 |
| KRH20903 | Soybean | cytosol | 32.62 | 39.16 |
| GSMUA_Achr8P00190_001 | Banana | cytosol | 16.72 | 38.26 |
| AT3G06130.1 | Thale cress | cytosol | 29.8 | 38.05 |
| KRH51031 | Soybean | cytosol | 30.79 | 37.96 |
| KRH02117 | Soybean | cytosol | 30.96 | 37.47 |
| Solyc01g080070.2.1 | Tomato | cytosol | 26.16 | 37.18 |
| GSMUA_Achr3P09060_001 | Banana | cytosol, mitochondrion, nucleus | 24.83 | 37.13 |
| VIT_05s0020g02690.t01 | Wine grape | cytosol | 29.97 | 36.86 |
| Solyc01g098760.2.1 | Tomato | cytosol | 25.99 | 36.77 |
| GSMUA_Achr10P... | Banana | cytosol | 25.5 | 36.75 |
| CDY13960 | Canola | cytosol | 29.97 | 36.57 |
| Bra020774.1-P | Field mustard | cytosol | 28.64 | 35.82 |
| PGSC0003DMT400073578 | Potato | cytosol | 25.83 | 35.78 |
| GSMUA_Achr8P21830_001 | Banana | endoplasmic reticulum | 24.17 | 34.68 |
| VIT_14s0128g00190.t01 | Wine grape | cytosol | 28.48 | 33.86 |
| AT5G19090.1 | Thale cress | cytosol | 32.28 | 33.22 |
| CDY66563 | Canola | cytosol | 23.51 | 32.95 |
| CDY40701 | Canola | cytosol | 23.34 | 32.56 |
| CDY71877 | Canola | cytosol | 23.18 | 32.48 |
| Bra023702.1-P | Field mustard | cytosol | 31.79 | 31.95 |
| Bra040643.1-P | Field mustard | cytosol | 29.14 | 31.65 |
| CDX92558 | Canola | cytosol | 29.14 | 31.54 |
| PGSC0003DMT400083194 | Potato | cytosol | 29.47 | 31.5 |
| CDY58340 | Canola | cytosol | 23.84 | 31.37 |
| CDY47193 | Canola | cytosol | 24.5 | 31.16 |
| CDY18766 | Canola | cytosol | 28.97 | 31.08 |
| CDY18788 | Canola | cytosol | 27.15 | 31.06 |
| Bra001140.1-P | Field mustard | cytosol, mitochondrion | 26.66 | 30.84 |
| AT3G05220.1 | Thale cress | cytosol | 29.3 | 30.68 |
| CDY27785 | Canola | cytosol | 28.15 | 30.52 |
| Bra001184.1-P | Field mustard | cytosol | 23.84 | 30.51 |
| KRG92825 | Soybean | cytosol | 26.66 | 30.38 |
| Bra039452.1-P | Field mustard | cytosol | 30.13 | 30.03 |
| Bra002209.1-P | Field mustard | cytosol, peroxisome, plastid, vacuole | 32.78 | 29.86 |
| KRG96856 | Soybean | cytosol | 22.35 | 29.61 |
| KRH68586 | Soybean | cytosol | 22.85 | 29.49 |
| KRH33969 | Soybean | cytosol | 27.32 | 29.46 |
| CDY05234 | Canola | nucleus | 12.09 | 29.32 |
| CDY71358 | Canola | nucleus | 11.42 | 28.87 |
| CDY05147 | Canola | cytosol | 23.34 | 28.78 |
| CDY24716 | Canola | cytosol | 12.42 | 26.6 |
| HORVU1Hr1G021620.2 | Barley | plastid | 16.23 | 25.06 |
| HORVU4Hr1G046610.1 | Barley | cytosol, mitochondrion, nucleus | 14.4 | 23.45 |
| HORVU3Hr1G004420.1 | Barley | nucleus | 16.06 | 22.66 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum | 11.09 | 20.24 |
| HORVU3Hr1G097770.1 | Barley | cytosol | 11.09 | 20.06 |
| HORVU7Hr1G118340.7 | Barley | cytosol, endoplasmic reticulum, plastid | 13.41 | 19.61 |
| HORVU1Hr1G058350.3 | Barley | cytosol | 10.1 | 19.55 |
| HORVU2Hr1G019950.2 | Barley | plastid | 6.95 | 9.03 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G025770.8 | EnsemblPlantsGene:HORVU4Hr1G025770 | Gene3D:3.30.70.100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 |
| PANTHER:PTHR22814 | PANTHER:PTHR22814:SF175 | PFAM:PF00403 | PFscan:PS50846 | SEG:seg | SignalP:SignalP-noTM |
| SUPFAM:SSF55008 | UniParc:UPI000B4607CF | UniProt:A0A287NL99 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr4H:+:151492760..151495022
Molecular Weight (calculated)
63038.4 Da
IEP (calculated)
8.455
GRAVY (calculated)
-0.746
Length
604 amino acids
Sequence
(BLAST)
(BLAST)
001: PNSRHSPACS FLFLLPWNFR EVACLLLCLI PACCSCFFVC SSPNPQTCVL KVNIHCDGCQ KKVKKILSKI DGVYQSSIDP EEGKVMVSGL VDPDTIIKKL
101: NKGGKPAVLW GSKPGGVANQ FQKLHLDGGG GGKGQQPKDA GGKGHAKDAG GKAHKGGGGG KDAKMAMPQP TPQQIQQMQQ QMQMKGPTPQ QLQQLQQQMQ
201: MKGAPTPQQL QQLQQQMQMK GAPTPQQLQQ LQQQMQMKGA PTPQQLQQLQ QQMQMKGLKL PPQFMGAAAA KMPFPAGAPA KDPKSVKFNI PDDGWGDDGG
301: SEFDDEFDEF DDDEDFDDDG FEDDYYDDPK MMMKQMAMPP NAGGGDKKGA SNGGKKGGGG NEIPVQIKGN GNNGGKKDAG GKQQHQGGNG NGNGGGKNAG
401: GGGQPNNVKG GAPVQGKKGG GVGGPAAAMG GPIGGGMQPQ QQAMFRPNMM GGAGFPGMGG PMGHPHAASS AQAGRAMQGM PPAGFYQGAG GGGGGMPSGA
501: EMLQAAAAAG NPMAQQQYMA LIQQQQQQQQ MTMLQQQQQQ QMMMNGGHGG GAGGYPQMGY GPGYGRPPMG SYPMPTAYAM PPQPPAGEPY NYFSDEDPNS
601: CSVM
101: NKGGKPAVLW GSKPGGVANQ FQKLHLDGGG GGKGQQPKDA GGKGHAKDAG GKAHKGGGGG KDAKMAMPQP TPQQIQQMQQ QMQMKGPTPQ QLQQLQQQMQ
201: MKGAPTPQQL QQLQQQMQMK GAPTPQQLQQ LQQQMQMKGA PTPQQLQQLQ QQMQMKGLKL PPQFMGAAAA KMPFPAGAPA KDPKSVKFNI PDDGWGDDGG
301: SEFDDEFDEF DDDEDFDDDG FEDDYYDDPK MMMKQMAMPP NAGGGDKKGA SNGGKKGGGG NEIPVQIKGN GNNGGKKDAG GKQQHQGGNG NGNGGGKNAG
401: GGGQPNNVKG GAPVQGKKGG GVGGPAAAMG GPIGGGMQPQ QQAMFRPNMM GGAGFPGMGG PMGHPHAASS AQAGRAMQGM PPAGFYQGAG GGGGGMPSGA
501: EMLQAAAAAG NPMAQQQYMA LIQQQQQQQQ MTMLQQQQQQ QMMMNGGHGG GAGGYPQMGY GPGYGRPPMG SYPMPTAYAM PPQPPAGEPY NYFSDEDPNS
601: CSVM
001: MDLGTEIKSD TRQEEQRHVF EDYPEPLRYT TWVLRVSIHC EGCKRKIKKI LSKIDGVYTT NIDVKQQKVT VIGNVEPEIL IKKIMKAGRH AELWPTSMEN
101: NINNDCNYQK KPKKDNEETS GDEDDDENNN NNNGGGDVGG GGGGGGGNFD QVKQVVTFVN GQLQPQGDGA PKKKKKKKKK KKSLGNTTVV MEGGGGGGGG
201: GGPPQNDGPP ETVIYSAPQD HHIIHGPPPH LHHHQQQNHP YPTVHSPPRH HPQQMYGPGP GLPPPSFYHT QPQTAPSYTV SYNTVHGPIN NGGNETASYY
301: TAPPSHPTSY YSYEYVDTGY ESPPPEFYSY RSQPSESFES LSEGNPNSCC VM
101: NINNDCNYQK KPKKDNEETS GDEDDDENNN NNNGGGDVGG GGGGGGGNFD QVKQVVTFVN GQLQPQGDGA PKKKKKKKKK KKSLGNTTVV MEGGGGGGGG
201: GGPPQNDGPP ETVIYSAPQD HHIIHGPPPH LHHHQQQNHP YPTVHSPPRH HPQQMYGPGP GLPPPSFYHT QPQTAPSYTV SYNTVHGPIN NGGNETASYY
301: TAPPSHPTSY YSYEYVDTGY ESPPPEFYSY RSQPSESFES LSEGNPNSCC VM
Arabidopsis Description
HIPP36Heavy metal-associated isoprenylated plant protein 36 [Source:UniProtKB/Swiss-Prot;Acc:Q84J88]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.