CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27785	Canola	cytosol	88.98	78.28
CDY18788	Canola	cytosol	82.24	76.33
Bra039452.1-P	Field mustard	cytosol	92.45	74.75
CDY18766	Canola	cytosol	84.08	73.18
CDY66563	Canola	cytosol	61.02	69.37
CDY40701	Canola	cytosol	60.41	68.36
AT3G05220.1	Thale cress	cytosol	79.59	67.59
Solyc01g098760.2.1	Tomato	cytosol	38.98	44.73
PGSC0003DMT400073578	Potato	cytosol	37.55	42.2
Zm00001d017393_P001	Maize	plastid	12.04	35.12
CDY13960	Canola	cytosol	33.88	33.54
CDY47193	Canola	cytosol	31.63	32.63
VIT_14s0128g00190.t01	Wine grape	cytosol	33.67	32.48
GSMUA_Achr8P00380_001	Banana	cytosol	25.92	30.98
CDY58340	Canola	cytosol	28.98	30.94
CDY71877	Canola	cytosol	27.14	30.86
Os12t0144600-01	Rice	cytosol	32.45	30.34
TraesCS5D01G141600.1	Wheat	cytosol	32.24	30.15
TraesCS5B01G131600.1	Wheat	cytosol	31.63	29.87
TraesCS5A01G133900.1	Wheat	cytosol	31.63	29.75
Os11t0147500-01	Rice	cytosol	31.22	29.71
CDX92558	Canola	cytosol	33.27	29.21
GSMUA_Achr11P...	Banana	cytosol	22.04	28.8
GSMUA_Achr8P08580_001	Banana	cytosol	22.04	28.12
HORVU5Hr1G040920.2	Barley	cytosol	27.14	28.06
KRG92825	Soybean	cytosol	29.59	27.36
EES15655	Sorghum	cytosol	31.43	27.3
GSMUA_Achr10P...	Banana	cytosol	23.27	27.21
Zm00001d016149_P001	Maize	cytosol	25.92	26.96
GSMUA_Achr8P21830_001	Banana	endoplasmic reticulum	23.06	26.84
KRG96856	Soybean	cytosol	24.9	26.75
KRH33969	Soybean	cytosol	30.41	26.61
GSMUA_Achr11P...	Banana	cytosol, extracellular	13.06	26.56
Zm00001d023372_P001	Maize	cytosol	29.8	26.5
Zm00001d053438_P002	Maize	cytosol	26.33	26.33
EES04840	Sorghum	cytosol	26.12	26.18
CDY24716	Canola	cytosol	14.9	25.89
CDY05234	Canola	nucleus	13.06	25.7
GSMUA_Achr3P09060_001	Banana	cytosol, mitochondrion, nucleus	21.02	25.5
TraesCS4B01G134000.1	Wheat	cytosol, mitochondrion, nucleus	29.59	25.39
KRH68586	Soybean	cytosol	24.08	25.21
TraesCS4A01G184700.1	Wheat	cytosol, mitochondrion, nucleus	28.57	24.78
TraesCS4D01G128900.1	Wheat	cytosol, mitochondrion, nucleus	29.8	24.75
CDY71358	Canola	nucleus	11.84	24.27
GSMUA_Achr8P00190_001	Banana	cytosol	13.06	24.24
Zm00001d004931_P001	Maize	cytosol, nucleus, plasma membrane	25.51	23.36
HORVU4Hr1G025770.8	Barley	endoplasmic reticulum	28.78	23.34
CDY01696	Canola	cytosol	10.61	21.67
CDX74552	Canola	cytosol	10.2	21.19
EES07966	Sorghum	cytosol, nucleus, peroxisome	21.22	20.72
OQU82864	Sorghum	cytosol	19.39	20.17
OQU79299	Sorghum	cytosol	15.92	19.95
CDY25027	Canola	cytosol	14.29	19.39
KXG27723	Sorghum	nucleus	22.86	18.82
CDY05566	Canola	nucleus	13.27	18.21
CDY53573	Canola	nucleus	12.65	17.82
CDY41724	Canola	nucleus	12.65	17.56
CDY04749	Canola	cytosol	12.65	17.42
CDY21409	Canola	cytosol	12.45	17.09
GSMUA_Achr11P...	Banana	endoplasmic reticulum	11.22	16.62
CDY05148	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDY05147	EnsemblPlantsGene:GSBRNA2T00119944001	Gene3D:3.30.70.100	GO:A0A078EW11	GO:GO:0003674	GO:GO:0005488
GO:GO:0006810	GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:IPR006121	PANTHER:PTHR22814	PANTHER:PTHR22814:SF134	PFAM:PF00403	PFscan:PS50846	ProteinID:CDY05147
ProteinID:CDY05147.1	SEG:seg	SUPFAM:SSF55008	UniParc:UPI0004EE9EEB	MapMan:35.1	:

Description

BnaC05g46560D

Coordinates

chrLK031960:+:54087..56273

Molecular Weight (calculated)

49332.0 Da

IEP (calculated)

9.551

GRAVY (calculated)

-0.946

Length

490 amino acids

Sequence
(BLAST)

001: MNKQDVMKLQ TCVLKVNVHC EGCKHKVRKQ LQKIEGVYSV KADVEQGKVT VTGNVDPAIL VKKLSKSGKH AEIIGGGGGG GKGFPNLNGQ FGNLSMNGKG
101: GKESNQAKGK PNGGGGGVGG GHGGQPMQLT PQQIQQMMMM KAAQAQGGGG GGGGHGGKDM KMMMPPVASK DQKKSVKFAE EEDDEFSDDD YDDEFSEDDY
201: DDDEFDDEDE DDDMGGGHGH GGGGGGNHHM PPNKMMMMPN KMMPQMGGGG GGAKGPNEMM MMMNGFKAGG GGGGGGEGKK GGGGFEIPVQ MKGMGEGKMR
301: KEGKKGGGDK GDKEGKKNKG GGGKNGKTDA KSGGGGLLGF FKNGKSGKGD EKKGGGKKEG GGGGDKVKSS GGGGGGVHHY DSGPKKGGGG GSKGGGHGAH
401: DIDELMKHHK AGGGGGNKGN HSAKGMGGPM GQGGPMGMMG QGGPMGMMGQ GGQMGMMGHQ GGQMGPMGHQ GGSYPAVEDI IHNQLRQVIK

Best Arabidopsis Sequence Match ( AT3G05220.1 )
(BLAST)

001: MNKQDVMKLQ TCVLKVNVHC EGCKHKVKKQ LQKIEGVYSV KADVEQGRVT VTGNIDPALL VKKLSKSGKH AEILGGGGGG GGGGGKGFPN LNGQFANLNM
101: GGNNKPKGGK ESNQVKGKAG GGGGGGQNHG HGQPMQLNPQ QIQQMMMMKA AHGGGGGGQM KMPPMAAKDQ KKSVKFADDE DDEFSEDDYD DEDFSEDDYD
201: DDEFDDDEDD DDEMGHGHGH GGGGGNHMPP NKMMMPNKMM PQMGGHHGNG GGPKGPNEIM MMMNGFKGGG GGGKKGGGGG FEIPVQMKGM GEGKNGKDGK
301: KGKGGEKGKK EGKENKGGGK TGKTDAKSGG GGLLGFFKKG KSGNGDEKKS AGKKDGHGGN KVKSHGGGGG VQHYDSGPKK GGGGTKGGGH GGLDIDELMK
401: HSKGGGGGGN KGNHNHSAKG IGGGPMGPGG PMGPGGPMGQ GGPMGMMGPG GPMSMMGPGG PMGPMGGQGG SYPAVQGLPM SGGGGYYPGP PQASQQMNQQ
501: QYMQMMMNQQ QQQQQQQQAV AHGGYGGGHG GDMYHPMMYA RPYPAVNYAH PPPMPPPHSD SYTHMFSDEN PGSCSIM

Arabidopsis Description

HIPP34Heavy metal-associated isoprenylated plant protein 34 [Source:UniProtKB/Swiss-Prot;Acc:Q0WV37]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.