Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
- cytosol 2
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71358 | Canola | nucleus | 62.22 | 11.72 |
| CDY05234 | Canola | nucleus | 62.22 | 11.24 |
| GSMUA_Achr8P00190_001 | Banana | cytosol | 53.33 | 9.09 |
| CDY40701 | Canola | cytosol | 86.67 | 9.01 |
| CDY66563 | Canola | cytosol | 84.44 | 8.82 |
| CDY27785 | Canola | cytosol | 100.0 | 8.08 |
| GSMUA_Achr11P... | Banana | cytosol, extracellular | 42.22 | 7.88 |
| Solyc01g098760.2.1 | Tomato | cytosol | 73.33 | 7.73 |
| AT3G05220.1 | Thale cress | cytosol | 97.78 | 7.63 |
| PGSC0003DMT400073578 | Potato | cytosol | 73.33 | 7.57 |
| Bra039452.1-P | Field mustard | cytosol | 100.0 | 7.43 |
| GSMUA_Achr10P... | Banana | cytosol | 62.22 | 6.68 |
| CDY18766 | Canola | cytosol | 82.22 | 6.57 |
| CDY53573 | Canola | nucleus | 46.67 | 6.03 |
| GSMUA_Achr8P08580_001 | Banana | cytosol | 51.11 | 5.99 |
| CDY41724 | Canola | nucleus | 46.67 | 5.95 |
| KRH68586 | Soybean | cytosol | 60.0 | 5.77 |
| GSMUA_Achr8P21830_001 | Banana | endoplasmic reticulum | 53.33 | 5.7 |
| GSMUA_Achr3P09060_001 | Banana | cytosol, mitochondrion, nucleus | 51.11 | 5.69 |
| KRG96856 | Soybean | cytosol | 55.56 | 5.48 |
| CDY47193 | Canola | cytosol | 57.78 | 5.47 |
| CDY71877 | Canola | cytosol | 51.11 | 5.34 |
| GSMUA_Achr11P... | Banana | cytosol | 44.44 | 5.33 |
| VIT_14s0128g00190.t01 | Wine grape | cytosol | 60.0 | 5.31 |
| CDY13960 | Canola | cytosol | 55.56 | 5.05 |
| CDY58340 | Canola | cytosol | 51.11 | 5.01 |
| GSMUA_Achr8P00380_001 | Banana | cytosol | 44.44 | 4.88 |
| HORVU5Hr1G040920.2 | Barley | cytosol | 51.11 | 4.85 |
| EES04840 | Sorghum | cytosol | 51.11 | 4.7 |
| CDX92558 | Canola | cytosol | 57.78 | 4.66 |
| KRG92825 | Soybean | cytosol | 53.33 | 4.53 |
| CDY04749 | Canola | cytosol | 35.56 | 4.49 |
| Zm00001d053438_P002 | Maize | cytosol | 48.89 | 4.49 |
| CDY21409 | Canola | cytosol | 35.56 | 4.48 |
| Os11t0147500-01 | Rice | cytosol | 51.11 | 4.47 |
| Zm00001d016149_P001 | Maize | cytosol | 46.67 | 4.46 |
| TraesCS5B01G131600.1 | Wheat | cytosol | 51.11 | 4.43 |
| TraesCS5A01G133900.1 | Wheat | cytosol | 51.11 | 4.41 |
| TraesCS5D01G141600.1 | Wheat | cytosol | 51.11 | 4.39 |
| OQU79299 | Sorghum | cytosol | 37.78 | 4.35 |
| KRH33969 | Soybean | cytosol | 53.33 | 4.29 |
| CDY05566 | Canola | nucleus | 33.33 | 4.2 |
| Os12t0144600-01 | Rice | cytosol | 48.89 | 4.2 |
| CDY25027 | Canola | cytosol | 33.33 | 4.16 |
| EES07966 | Sorghum | cytosol, nucleus, peroxisome | 44.44 | 3.98 |
| EES15655 | Sorghum | cytosol | 48.89 | 3.9 |
| Zm00001d023372_P001 | Maize | cytosol | 46.67 | 3.81 |
| TraesCS4A01G184700.1 | Wheat | cytosol, mitochondrion, nucleus | 46.67 | 3.72 |
| TraesCS4B01G134000.1 | Wheat | cytosol, mitochondrion, nucleus | 46.67 | 3.68 |
| OQU82864 | Sorghum | cytosol | 37.78 | 3.61 |
| TraesCS4D01G128900.1 | Wheat | cytosol, mitochondrion, nucleus | 46.67 | 3.56 |
| Zm00001d004931_P001 | Maize | cytosol, nucleus, plasma membrane | 42.22 | 3.55 |
| HORVU4Hr1G025770.8 | Barley | endoplasmic reticulum | 46.67 | 3.48 |
| CDY18788 | Canola | cytosol | 40.0 | 3.41 |
| KXG27723 | Sorghum | nucleus | 40.0 | 3.03 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum | 20.0 | 2.72 |
| CDY24716 | Canola | cytosol | 11.11 | 1.77 |
| CDX74552 | Canola | cytosol | 8.89 | 1.69 |
| CDY01696 | Canola | cytosol | 8.89 | 1.67 |
| CDY05147 | Canola | cytosol | 0.0 | 0.0 |
| Zm00001d017393_P001 | Maize | plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY05148 | EnsemblPlantsGene:GSBRNA2T00119945001 | ProteinID:CDY05148 | ProteinID:CDY05148.1 | SEG:seg | UniParc:UPI0004EE9D90 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC05g46550D
Coordinates
chrLK031960:+:56369..56683
Molecular Weight (calculated)
5170.1 Da
IEP (calculated)
6.496
GRAVY (calculated)
-0.760
Length
45 amino acids
Sequence
(BLAST)
(BLAST)
1: MYHPMMYARP YPSVNYAHPP PMPPPHSDSY THMFSDENPG SCSIM
001: MGGNNKPKGG KESNQVKGKA GGGGGGGQNH GHGQPMQLNP QQIQQMMMMK AAHGGGGGGQ MKMPPMAAKD QKKSVKFADD EDDEFSEDDY DDEDFSEDDY
101: DDDEFDDDED DDDEMGHGHG HGGGGGNHMP PNKMMMPNKM MPQMGGHHGN GGGPKGPNEI MMMMNGFKGG GGGGKKGGGG GFEIPVQMKG MGEGKNGKDG
201: KKGKGGEKGK KEGKENKGGG KTGKTDAKSG GGGLLGFFKK GKSGNGDEKK SAGKKDGHGG NKVKSHGGGG GVQHYDSGPK KGGGGTKGGG HGGLDIDELM
301: KHSKGGGGGG NKGNHNHSAK GIGGGPMGPG GPMGPGGPMG QGGPMGMMGP GGPMSMMGPG GPMGPMGGQG GSYPAVQGLP MSGGGGYYPG PPQASQQMNQ
401: QQYMQMMMNQ QQQQQQQQQA VAHGGYGGGH GGDMYHPMMY ARPYPAVNYA HPPPMPPPHS DSYTHMFSDE NPGSCSIM
101: DDDEFDDDED DDDEMGHGHG HGGGGGNHMP PNKMMMPNKM MPQMGGHHGN GGGPKGPNEI MMMMNGFKGG GGGGKKGGGG GFEIPVQMKG MGEGKNGKDG
201: KKGKGGEKGK KEGKENKGGG KTGKTDAKSG GGGLLGFFKK GKSGNGDEKK SAGKKDGHGG NKVKSHGGGG GVQHYDSGPK KGGGGTKGGG HGGLDIDELM
301: KHSKGGGGGG NKGNHNHSAK GIGGGPMGPG GPMGPGGPMG QGGPMGMMGP GGPMSMMGPG GPMGPMGGQG GSYPAVQGLP MSGGGGYYPG PPQASQQMNQ
401: QQYMQMMMNQ QQQQQQQQQA VAHGGYGGGH GGDMYHPMMY ARPYPAVNYA HPPPMPPPHS DSYTHMFSDE NPGSCSIM
Arabidopsis Description
HIPP34Heavy metal-associated isoprenylated plant protein 34 [Source:UniProtKB/Swiss-Prot;Acc:Q0WV37]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.