CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU82864	Sorghum	cytosol	70.92	75.58
KXG27723	Sorghum	nucleus	78.29	66.05
Zm00001d004931_P001	Maize	cytosol, nucleus, plasma membrane	56.57	53.08
EES15655	Sorghum	cytosol	52.19	46.45
EES04840	Sorghum	cytosol	44.02	45.19
CDY05148	Canola	cytosol	3.98	44.44
TraesCS4B01G134000.1	Wheat	cytosol, mitochondrion, nucleus	44.42	39.05
TraesCS4A01G184700.1	Wheat	cytosol, mitochondrion, nucleus	42.43	37.7
TraesCS4D01G128900.1	Wheat	cytosol, mitochondrion, nucleus	44.02	37.46
HORVU4Hr1G025770.8	Barley	endoplasmic reticulum	43.23	35.93
GSMUA_Achr11P...	Banana	cytosol, extracellular	16.33	34.02
GSMUA_Achr11P...	Banana	cytosol	23.9	32.0
GSMUA_Achr8P08580_001	Banana	cytosol	23.51	30.73
GSMUA_Achr8P00380_001	Banana	cytosol	24.9	30.49
OQU79299	Sorghum	cytosol	22.91	29.41
GSMUA_Achr8P00190_001	Banana	cytosol	15.34	29.17
GSMUA_Achr3P09060_001	Banana	cytosol, mitochondrion, nucleus	21.71	26.98
Solyc01g098760.2.1	Tomato	cytosol	22.71	26.7
GSMUA_Achr8P21830_001	Banana	endoplasmic reticulum	22.11	26.37
GSMUA_Achr10P...	Banana	cytosol	21.91	26.25
KRH11382	Soybean	cytosol	25.7	26.22
PGSC0003DMT400073578	Potato	cytosol	22.71	26.15
AT3G06130.1	Thale cress	cytosol	24.5	26.0
CDY71877	Canola	cytosol	21.71	25.29
CDY13960	Canola	cytosol	24.9	25.25
CDY58340	Canola	cytosol	22.91	25.05
KRH20903	Soybean	cytosol	25.1	25.05
KRH02117	Soybean	cytosol	24.7	24.85
VIT_05s0020g02690.t01	Wine grape	cytosol	24.3	24.85
Bra020774.1-P	Field mustard	cytosol	23.9	24.84
KRH51031	Soybean	cytosol	24.1	24.69
Solyc01g080070.2.1	Tomato	cytosol	20.72	24.47
Bra001184.1-P	Field mustard	cytosol	22.91	24.36
CDY40701	Canola	cytosol	20.52	23.79
VIT_14s0128g00190.t01	Wine grape	cytosol	23.9	23.62
CDY66563	Canola	cytosol	20.12	23.43
Bra040643.1-P	Field mustard	cytosol	25.7	23.2
KRG96856	Soybean	cytosol	20.92	23.03
CDY18766	Canola	cytosol	25.5	22.74
KRH68586	Soybean	cytosol	21.12	22.65
AT3G05220.1	Thale cress	cytosol	25.9	22.53
CDY27785	Canola	cytosol	24.9	22.44
CDY18788	Canola	cytosol	23.31	22.16
PGSC0003DMT400083194	Potato	cytosol	24.9	22.12
KRG92825	Soybean	cytosol	23.31	22.08
AT5G19090.1	Thale cress	cytosol	25.7	21.98
Bra001140.1-P	Field mustard	cytosol, mitochondrion	22.51	21.65
CDY47193	Canola	cytosol	20.32	21.47
Bra039452.1-P	Field mustard	cytosol	25.9	21.45
CDY05147	Canola	cytosol	20.72	21.22
CDX92558	Canola	cytosol	23.51	21.15
Bra023702.1-P	Field mustard	cytosol	25.3	21.13
OQU90456	Sorghum	cytosol	14.54	20.98
EES17720	Sorghum	nucleus	15.34	20.75
KRH33969	Soybean	cytosol	23.11	20.71
CDY24716	Canola	cytosol	11.35	20.21
EES02570	Sorghum	cytosol	16.93	19.02
Bra002209.1-P	Field mustard	cytosol, peroxisome, plastid, vacuole	25.1	19.0
CDY05234	Canola	nucleus	9.36	18.88
CDY71358	Canola	nucleus	8.96	18.83
KXG39397	Sorghum	cytosol	15.74	18.54
GSMUA_Achr11P...	Banana	endoplasmic reticulum	11.35	17.22
KXG34066	Sorghum	cytosol, plastid	14.14	17.11

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.1	EntrezGene:8069305	UniProt:C5Y4K1	EnsemblPlants:EES07966	ProteinID:EES07966
ProteinID:EES07966.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0030001
GO:GO:0046872	GO:GO:0046914	GO:GO:0046916	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121
PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF278	EnsemblPlantsGene:SORBI_3005G033400	SUPFAM:SSF55008
UniParc:UPI0001A861F8	RefSeq:XP_002448978.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:2987269..2990310

Molecular Weight (calculated)

51340.5 Da

IEP (calculated)

7.222

GRAVY (calculated)

-0.695

Length

502 amino acids

Sequence
(BLAST)

001: MSRQDILKVQ TLELKVPIHC EGCLKKVKKI VQKIDGVYQS SVDAALGKVT VTGLMDPETV ITKIHKSGKP VRVWGEKPGV PLEVQLQNLK LGSDGNGKGQ
101: QQPKDDGGKG QQQLQQQPKD AGGKDHGQGK QPKGGAGGGG AAAGGAKEAK MVAPPPHPQP TPQRFEQMTT LLPIPMGAGK MPMPMPMPFP AAAPPAKAVA
201: AKDPRTVKFD LPGGDEFGDD DSSGFGDEYD DVDFEDEDDD LDDDMFDDDD PAMMTRPMGM PPAAGGGDKK AGGGHGNGGG NGAGGKKGGG GGAQQPPKNG
301: LGGENQPRQG KKGGGPADAG LGGPMMAGGA PPMMMRPPGH MMGAGDGARF PAMVQMGGGG PLVSMPMGHP HMVGAGAHGK PAGGMPMGLP HMGVPGIQPS
401: GGGGGAHGKP AGGLPMGGHP YYMGGVGMPM GNHHHTHHGH GGQGYPPPPP SYGYGYGRPA MPSYPPMPQY PPPAPYYYAI PPQRHPHDNM FSDENPNACS
501: VM

Best Arabidopsis Sequence Match ( AT5G19090.1 )
(BLAST)

001: MSKEEFMKIQ TCVLKVNIHC DGCKQKVKKI LQKIEGVFTT KIDAELGKVT VSGNVDPSVL IKKLLKSGKH AEIWGAPKGG SNNNQNQPNL ANQFKAMQID
101: HGGKGGGGGG GGPANNNKGQ KIGGGGGGGG GGGGGGGGGP PKMVIPQLTP QQMQQLNPQQ LQQLQQLQQM KGFQDLKLPP QLKGGPGPGP GSVPMNKNPQ
201: MPNNPNQKAV KFNVPDDDDE EDFSDEFDDE FDEDDDEFDD DLEDDEFDDH PPPPNKMKPM MGGGNMIMPN NMMPNMMMPN AQQMLNAHKN GGGPGPAGGK
301: IEGKGMPFPV QMGGGGGGPG GKKGGPGGGG GNMGNQNQGG GGKNGGKGGG GHPLDGKMGG GGGGPNGNKG GGGVQMNGGP NGGKKGGGGG GGGGGGPMSG
401: GLPPGFRPMG GGGGGGGGPQ SMSMPMGGAM GGPMGSLPQM GGGPGPMSNN MQAVQGLPAM GPGGGGGGGP SAEAPPGYFQ GQVSGNGGGG QDSMPGNPYL
501: QQQQQQQQQQ YLAAVMNQQR SMGNERFQPM MYARPPPAVN YMPPQPQPHQ QHPYPYPYPY PPQYPPHNGD QYSDYFNDEN TSSCNIM

Arabidopsis Description

HIPP33Heavy metal-associated isoprenylated plant protein 33 [Source:UniProtKB/Swiss-Prot;Acc:F4JZL7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.