CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035783_P001	Maize	nucleus	83.02	87.01
Os05t0150733-00	Rice	cytosol, nucleus, plastid	33.69	64.1
HORVU1Hr1G021620.2	Barley	plastid	61.99	58.82
TraesCS1A01G091600.1	Wheat	endoplasmic reticulum, plastid	61.99	57.79
TraesCS1B01G119400.1	Wheat	cytosol, plastid	61.99	56.79
TraesCS1D01G100200.1	Wheat	plastid, vacuole	62.53	56.72
GSMUA_Achr11P...	Banana	cytosol	34.77	51.6
VIT_07s0005g00050.t01	Wine grape	cytosol	28.84	39.93
GSMUA_AchrUn_...	Banana	plastid	22.64	36.84
OQU90456	Sorghum	cytosol	32.08	34.2
KRG96418	Soybean	cytosol	26.15	32.99
KRH68159	Soybean	cytosol	25.88	32.76
KXG39397	Sorghum	cytosol	26.68	23.24
KXG34066	Sorghum	cytosol, plastid	24.8	22.17
OQU79299	Sorghum	cytosol	21.56	20.46
EES04840	Sorghum	cytosol	25.88	19.63
EES15655	Sorghum	cytosol	26.15	17.2
EES02570	Sorghum	cytosol	19.68	16.33
EES07966	Sorghum	cytosol, nucleus, peroxisome	20.75	15.34
OQU82864	Sorghum	cytosol	18.33	14.44
KXG27723	Sorghum	nucleus	21.56	13.45

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.1	EntrezGene:8069505	UniProt:C5Z050	EnsemblPlants:EES17720	ProteinID:EES17720
ProteinID:EES17720.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0030001
GO:GO:0046872	GO:GO:0046914	GO:GO:0046916	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121
PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF75	EnsemblPlantsGene:SORBI_3009G045600	SUPFAM:SSF55008
unigene:Sbi.9247	UniParc:UPI0001A8876B	RefSeq:XP_002439290.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr9:+:4363961..4367129

Molecular Weight (calculated)

36273.0 Da

IEP (calculated)

8.295

GRAVY (calculated)

-0.658

Length

371 amino acids

Sequence
(BLAST)

001: MAAAAEEGPE PLRYQTLALR VSIHCEGCKK KVKKVLHSIE GVYKTDIDTQ QHKVVVIGNV SVDALVKKLL KSGKHAEPWP EPAAPPAPPA DGGSPPGGSP
101: GSSGGGGKKK KKKKSNKSPA AAATNNKPAE PAEGTGGPSP PEQHDKADGG ASCDEASDGE QDKPEAGGGG GGGGNGSPDA GEAHESGASG KVPPSAMTPH
201: GPQPIAPPAN GNGGGGGGGK KKGKKGGHGN GNGNGNGNGN ANGGGSAGAG AIAEVHPPPD GPMKPAAGNS GPLTVVDAGP YPPPPPAAAM MSYPGYYAGG
301: GVHPPAYVMS YSTAHPSSAL RSSAYYHPMA GAAYTPGAGG GYFYSTAPPV SAAPGSYYMF SEENANACSV M

Best Arabidopsis Sequence Match ( AT5G27690.1 )
(BLAST)

001: MDLGTEIKSD TRQEEQRHVF EDYPEPLRYT TWVLRVSIHC EGCKRKIKKI LSKIDGVYTT NIDVKQQKVT VIGNVEPEIL IKKIMKAGRH AELWPTSMEN
101: NINNDCNYQK KPKKDNEETS GDEDDDENNN NNNGGGDVGG GGGGGGGNFD QVKQVVTFVN GQLQPQGDGA PKKKKKKKKK KKSLGNTTVV MEGGGGGGGG
201: GGPPQNDGPP ETVIYSAPQD HHIIHGPPPH LHHHQQQNHP YPTVHSPPRH HPQQMYGPGP GLPPPSFYHT QPQTAPSYTV SYNTVHGPIN NGGNETASYY
301: TAPPSHPTSY YSYEYVDTGY ESPPPEFYSY RSQPSESFES LSEGNPNSCC VM

Arabidopsis Description

HIPP36Heavy metal-associated isoprenylated plant protein 36 [Source:UniProtKB/Swiss-Prot;Acc:Q84J88]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.