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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d023372_P001 Maize cytosol 85.99 88.02
Zm00001d017393_P001 Maize plastid 22.34 75.0
EES04840 Sorghum cytosol 55.32 63.8
TraesCS4B01G134000.1 Wheat cytosol, mitochondrion, nucleus 59.04 58.32
TraesCS4A01G184700.1 Wheat cytosol, mitochondrion, nucleus 57.62 57.52
TraesCS4D01G128900.1 Wheat cytosol, mitochondrion, nucleus 59.04 56.44
HORVU4Hr1G025770.8 Barley endoplasmic reticulum 57.98 54.14
EES07966 Sorghum cytosol, nucleus, peroxisome 46.45 52.19
OQU82864 Sorghum cytosol 43.26 51.8
KXG27723 Sorghum nucleus 51.77 49.08
CDY05148 Canola cytosol 3.9 48.89
GSMUA_Achr8P00380_001 Banana cytosol 33.16 45.61
GSMUA_Achr11P... Banana cytosol 30.32 45.6
GSMUA_Achr11P... Banana cytosol, extracellular 19.33 45.23
GSMUA_Achr8P08580_001 Banana cytosol 29.96 44.01
KRH11382 Soybean cytosol 36.88 42.28
GSMUA_Achr8P00190_001 Banana cytosol 19.5 41.67
OQU79299 Sorghum cytosol 28.19 40.66
KRH51031 Soybean cytosol 35.28 40.61
KRH20903 Soybean cytosol 36.17 40.56
KRH02117 Soybean cytosol 35.82 40.48
GSMUA_Achr3P09060_001 Banana cytosol, mitochondrion, nucleus 28.55 39.85
GSMUA_Achr10P... Banana cytosol 29.43 39.62
AT3G06130.1 Thale cress cytosol 33.16 39.53
VIT_05s0020g02690.t01 Wine grape cytosol 34.04 39.1
Solyc01g098760.2.1 Tomato cytosol 29.08 38.41
CDY13960 Canola cytosol 33.51 38.18
Solyc01g080070.2.1 Tomato cytosol 28.55 37.88
Bra020774.1-P Field mustard cytosol 32.27 37.68
PGSC0003DMT400073578 Potato cytosol 28.72 37.16
GSMUA_Achr8P21830_001 Banana endoplasmic reticulum 27.48 36.82
CDY71877 Canola cytosol 27.66 36.19
VIT_14s0128g00190.t01 Wine grape cytosol 32.09 35.63
PGSC0003DMT400083194 Potato cytosol 35.46 35.4
CDY40701 Canola cytosol 26.95 35.1
CDY66563 Canola cytosol 26.6 34.8
AT5G19090.1 Thale cress cytosol 35.99 34.58
Bra040643.1-P Field mustard cytosol 34.04 34.53
CDY58340 Canola cytosol 28.01 34.42
CDY18788 Canola cytosol 31.91 34.09
Bra001184.1-P Field mustard cytosol 28.37 33.9
CDY47193 Canola cytosol 28.37 33.68
Bra023702.1-P Field mustard cytosol 35.82 33.61
CDY18766 Canola cytosol 33.51 33.57
CDY27785 Canola cytosol 32.8 33.21
AT3G05220.1 Thale cress cytosol 33.51 32.76
KRG92825 Soybean cytosol 30.67 32.64
CDX92558 Canola cytosol 32.09 32.44
KRH33969 Soybean cytosol 32.09 32.32
Bra001140.1-P Field mustard cytosol, mitochondrion 29.79 32.18
Bra039452.1-P Field mustard cytosol 34.57 32.18
CDY71358 Canola nucleus 13.48 31.8
CDY05234 Canola nucleus 14.01 31.73
CDY05147 Canola cytosol 27.3 31.43
KRG96856 Soybean cytosol 25.35 31.36
KRH68586 Soybean cytosol 25.71 30.98
Bra002209.1-P Field mustard cytosol, peroxisome, plastid, vacuole 35.28 30.02
CDY24716 Canola cytosol 14.01 28.01
EES17720 Sorghum nucleus 17.2 26.15
EES02570 Sorghum cytosol 20.39 25.73
OQU90456 Sorghum cytosol 15.25 24.71
GSMUA_Achr11P... Banana endoplasmic reticulum 12.41 21.15
KXG39397 Sorghum cytosol 15.07 19.95
KXG34066 Sorghum cytosol, plastid 14.36 19.52
Protein Annotations
Gene3D:3.30.70.100MapMan:35.1EntrezGene:8066949UniProt:C5YRN0EnsemblPlants:EES15655ProteinID:EES15655
ProteinID:EES15655.1GO:GO:0003674GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0006810GO:GO:0008150GO:GO:0009987GO:GO:0019725GO:GO:0030001
GO:GO:0046872GO:GO:0046914GO:GO:0046916InterPro:HMA_domInterPro:HMA_dom_sfInterPro:IPR006121
PFAM:PF00403PFscan:PS50846PANTHER:PTHR22814PANTHER:PTHR22814:SF278EnsemblPlantsGene:SORBI_3008G032800SUPFAM:SSF55008
UniParc:UPI0001A88562RefSeq:XP_002441817.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr8:+:2938423..2941508
Molecular Weight (calculated)
56397.2 Da
IEP (calculated)
8.537
GRAVY (calculated)
-0.818
Length
564 amino acids
Sequence
(BLAST)
001: MSKEDVLKVQ TCVLKVNIHC DGCEKKVKKI LHKIDGVYQS SIDAEQGKVT VSGLMDPATV IKKLNKAGKP AQLWGAKPGV VSQLQKLQLG GGGGGGKDKQ
101: PKGGDSGAKG GGKGQHQQPK GGNGGGGKGQ QPKGGGGGGG GGGAGGKDAK MMMPQPTPQQ MQQLMQMKGM KLPPEFLMSM GAGGKMPPFP TAAAAPAAPA
201: AGKDPTKAGK FSYPEEDEFG DDGSEFDDEF DDFDDEDDFE DDGFDDDDLY GDPKMAMKPV AMPPAAAGGD KKGGKKGGGG GGGGGGNEIP VQMKGNAHNG
301: GGGKKDSGGK QNQGGGGGGG KNGGGSQPPQ NGKGGGNGNQ QGKKGGGGGG GQPAGAGVGA SAGAPMMGGM AMPPPPQQQQ PGPGMMMRPP NMMGGAGFPG
401: GMGQAMGQMG GTPMGHHHPH HQHMGGGGNG MQMMQPGGGG GGAVHGMPAG GTMPGAAAFY QGGGGGMPSG PPPEMMQAAG NPMAMAQAQQ QQQYMAMMQQ
501: QQQQMNGHGG GAAGGYPAMG YGYGYGRPAM QYPQPPPYYY HPMPQRHPHD NMFSDENPNS CTVM
Best Arabidopsis Sequence Match ( AT5G19090.1 )
(BLAST)
001: MSKEEFMKIQ TCVLKVNIHC DGCKQKVKKI LQKIEGVFTT KIDAELGKVT VSGNVDPSVL IKKLLKSGKH AEIWGAPKGG SNNNQNQPNL ANQFKAMQID
101: HGGKGGGGGG GGPANNNKGQ KIGGGGGGGG GGGGGGGGGP PKMVIPQLTP QQMQQLNPQQ LQQLQQLQQM KGFQDLKLPP QLKGGPGPGP GSVPMNKNPQ
201: MPNNPNQKAV KFNVPDDDDE EDFSDEFDDE FDEDDDEFDD DLEDDEFDDH PPPPNKMKPM MGGGNMIMPN NMMPNMMMPN AQQMLNAHKN GGGPGPAGGK
301: IEGKGMPFPV QMGGGGGGPG GKKGGPGGGG GNMGNQNQGG GGKNGGKGGG GHPLDGKMGG GGGGPNGNKG GGGVQMNGGP NGGKKGGGGG GGGGGGPMSG
401: GLPPGFRPMG GGGGGGGGPQ SMSMPMGGAM GGPMGSLPQM GGGPGPMSNN MQAVQGLPAM GPGGGGGGGP SAEAPPGYFQ GQVSGNGGGG QDSMPGNPYL
501: QQQQQQQQQQ YLAAVMNQQR SMGNERFQPM MYARPPPAVN YMPPQPQPHQ QHPYPYPYPY PPQYPPHNGD QYSDYFNDEN TSSCNIM
Arabidopsis Description
HIPP33Heavy metal-associated isoprenylated plant protein 33 [Source:UniProtKB/Swiss-Prot;Acc:F4JZL7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.