Factsheet for Bra001140.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 3
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66563	Canola	cytosol	81.42	98.61
CDY40701	Canola	cytosol	78.74	94.92
Bra040643.1-P	Field mustard	cytosol	82.18	77.16
AT3G05220.1	Thale cress	cytosol	76.25	68.98
Bra039452.1-P	Field mustard	cytosol	78.54	67.66
Solyc01g098760.2.1	Tomato	cytosol	41.95	51.29
PGSC0003DMT400073578	Potato	cytosol	40.61	48.62
GSMUA_Achr8P00190_001	Banana	cytosol	19.92	39.39
Bra020774.1-P	Field mustard	cytosol	35.63	38.51
GSMUA_Achr11P...	Banana	cytosol, extracellular	17.05	36.93
GSMUA_Achr8P00380_001	Banana	cytosol	28.74	36.59
VIT_14s0128g00190.t01	Wine grape	cytosol	34.67	35.63
GSMUA_Achr8P08580_001	Banana	cytosol	25.29	34.38
Bra001184.1-P	Field mustard	cytosol	31.03	34.32
GSMUA_Achr11P...	Banana	cytosol	24.14	33.6
TraesCS5D01G141600.1	Wheat	cytosol	33.72	33.59
Bra023702.1-P	Field mustard	cytosol	38.51	33.44
GSMUA_Achr3P09060_001	Banana	cytosol, mitochondrion, nucleus	25.86	33.42
TraesCS5B01G131600.1	Wheat	cytosol	33.14	33.33
GSMUA_Achr10P...	Banana	cytosol	26.63	33.17
TraesCS5A01G133900.1	Wheat	cytosol	32.95	33.01
Os12t0144600-01	Rice	cytosol	32.95	32.82
Zm00001d017393_P001	Maize	plastid	10.54	32.74
Os11t0147500-01	Rice	cytosol	32.18	32.62
GSMUA_Achr8P21830_001	Banana	endoplasmic reticulum	26.25	32.54
HORVU5Hr1G040920.2	Barley	cytosol	28.74	31.65
KRG96856	Soybean	cytosol	27.39	31.36
Zm00001d016149_P001	Maize	cytosol	27.59	30.57
Zm00001d053438_P002	Maize	cytosol	28.54	30.41
EES04840	Sorghum	cytosol	28.16	30.06
EES15655	Sorghum	cytosol	32.18	29.79
KRH68586	Soybean	cytosol	26.63	29.7
KRG92825	Soybean	cytosol	30.08	29.62
Bra002209.1-P	Field mustard	cytosol, peroxisome, plastid, vacuole	37.36	29.41
KRH33969	Soybean	cytosol	31.42	29.29
Zm00001d023372_P001	Maize	cytosol	30.84	29.22
TraesCS4B01G134000.1	Wheat	cytosol, mitochondrion, nucleus	30.65	28.02
TraesCS4A01G184700.1	Wheat	cytosol, mitochondrion, nucleus	30.08	27.79
TraesCS4D01G128900.1	Wheat	cytosol, mitochondrion, nucleus	31.03	27.46
Zm00001d004931_P001	Maize	cytosol, nucleus, plasma membrane	27.97	27.29
HORVU4Hr1G025770.8	Barley	endoplasmic reticulum	30.84	26.66
Bra028156.1-P	Field mustard	cytosol	11.69	25.31
OQU79299	Sorghum	cytosol	18.58	24.81
Bra020580.1-P	Field mustard	nucleus	16.48	23.96
Bra027947.1-P	Field mustard	nucleus	15.9	23.51
EES07966	Sorghum	cytosol, nucleus, peroxisome	21.65	22.51
OQU82864	Sorghum	cytosol	19.92	22.08
KXG27723	Sorghum	nucleus	25.1	22.02
Bra024557.1-P	Field mustard	cytosol	14.37	21.01
GSMUA_Achr11P...	Banana	endoplasmic reticulum	10.73	16.92

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.1	InterPro:ARM-type_fold	EnsemblPlantsGene:Bra001140	EnsemblPlants:Bra001140.1	EnsemblPlants:Bra001140.1-P
GO:GO:0003674	GO:GO:0005488	GO:GO:0006810	GO:GO:0008150	GO:GO:0030001	GO:GO:0046872
InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121	UniProt:M4CAB1	PFAM:PF00403	PFscan:PS50846
PANTHER:PTHR22814	PANTHER:PTHR22814:SF134	SUPFAM:SSF48371	SUPFAM:SSF55008	UniParc:UPI00025409CF	SEG:seg

Description

AT3G05220 (E=5e-026) | heavy-metal-associated domain-containing protein

Coordinates

chrA03:+:14939171..14948004

Molecular Weight (calculated)

54077.0 Da

IEP (calculated)

6.238

GRAVY (calculated)

-0.889

Length

522 amino acids

Sequence
(BLAST)

001: MPRLEVTHLQ YRMKDRFCSV ASTSSYGVHP GSQEESTPQP TFQETCVLKV NVHCEGCKHK VKKQLQKIEG VYSVKADVEQ GKVTVTGNVD PAILVKKLSK
101: SGKHAEIIGG GGGGGKESNG KANGGGGGGQ SHGQPMQLTP QQIQQMMMMK AAQAGGGGGK DMKMMMPPVA SKDQKKSVKF EEEEDDDDEF SDDDYDDDEE
201: FSEDDYDDDE FDEEDEDDDE MGGHGHMPPN KMTMMPNKMP QMGGGGGAKG PNEIMMMMNG LKAGGGGGGG GGGGGGFEIP VKMKGMGEGK MGKEEKENKG
301: GGGKTGKADA KSGGGLLGFF KKGKSEKGGE KKGDGGGGDK VKSSGGGGGG GEVHHYDDGP KKGGGKSKGG AHGAHDIDEL MKQIKAGGGG NKGNHNQISA
401: KGMGGPMGQG GPMGMMGPMG HQGGGAFPAV QGLPMSGGGG YYPPPPQAMN QQQYMQMMMQ QQQAAAYGGY GGGHGGGMYH PMMYARPYPA VNYAHPPPMP
501: PPHSGPYSDM FSDENPAGCS IM

Best Arabidopsis Sequence Match ( AT3G05220.1 )
(BLAST)

001: MNKQDVMKLQ TCVLKVNVHC EGCKHKVKKQ LQKIEGVYSV KADVEQGRVT VTGNIDPALL VKKLSKSGKH AEILGGGGGG GGGGGKGFPN LNGQFANLNM
101: GGNNKPKGGK ESNQVKGKAG GGGGGGQNHG HGQPMQLNPQ QIQQMMMMKA AHGGGGGGQM KMPPMAAKDQ KKSVKFADDE DDEFSEDDYD DEDFSEDDYD
201: DDEFDDDEDD DDEMGHGHGH GGGGGNHMPP NKMMMPNKMM PQMGGHHGNG GGPKGPNEIM MMMNGFKGGG GGGKKGGGGG FEIPVQMKGM GEGKNGKDGK
301: KGKGGEKGKK EGKENKGGGK TGKTDAKSGG GGLLGFFKKG KSGNGDEKKS AGKKDGHGGN KVKSHGGGGG VQHYDSGPKK GGGGTKGGGH GGLDIDELMK
401: HSKGGGGGGN KGNHNHSAKG IGGGPMGPGG PMGPGGPMGQ GGPMGMMGPG GPMSMMGPGG PMGPMGGQGG SYPAVQGLPM SGGGGYYPGP PQASQQMNQQ
501: QYMQMMMNQQ QQQQQQQQAV AHGGYGGGHG GDMYHPMMYA RPYPAVNYAH PPPMPPPHSD SYTHMFSDEN PGSCSIM

Arabidopsis Description

HIPP34Heavy metal-associated isoprenylated plant protein 34 [Source:UniProtKB/Swiss-Prot;Acc:Q0WV37]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.