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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • mitochondrion 2
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY05148 Canola cytosol 7.63 97.78
CDY66563 Canola cytosol 63.26 84.69
CDY27785 Canola cytosol 80.76 83.66
CDY40701 Canola cytosol 62.74 83.6
CDY18788 Canola cytosol 76.43 83.52
Bra040643.1-P Field mustard cytosol 80.07 83.09
CDY18766 Canola cytosol 80.59 82.59
CDY05147 Canola cytosol 67.59 79.59
Bra039452.1-P Field mustard cytosol 83.54 79.54
Bra001140.1-P Field mustard cytosol, mitochondrion 68.98 76.25
Solyc01g098760.2.1 Tomato cytosol 42.29 57.14
PGSC0003DMT400073578 Potato cytosol 40.9 54.13
AT3G06130.1 Thale cress cytosol 36.4 44.4
GSMUA_Achr8P00190_001 Banana cytosol 18.54 40.53
VIT_14s0128g00190.t01 Wine grape cytosol 34.32 38.98
GSMUA_Achr11P... Banana cytosol, extracellular 15.77 37.76
AT5G19090.1 Thale cress cytosol 38.3 37.65
TraesCS5D01G141600.1 Wheat cytosol 33.28 36.64
GSMUA_Achr8P00380_001 Banana cytosol 26.0 36.59
KRG96856 Soybean cytosol 28.77 36.4
Os11t0147500-01 Rice cytosol 32.41 36.31
TraesCS5B01G131600.1 Wheat cytosol 32.58 36.22
TraesCS5A01G133900.1 Wheat cytosol 32.58 36.08
GSMUA_Achr8P08580_001 Banana cytosol 23.92 35.94
Os12t0144600-01 Rice cytosol 32.58 35.88
KRG92825 Soybean cytosol 32.24 35.09
GSMUA_Achr10P... Banana cytosol 25.3 34.84
HORVU5Hr1G040920.2 Barley cytosol 28.42 34.6
Zm00001d017393_P001 Maize plastid 10.05 34.52
GSMUA_Achr3P09060_001 Banana cytosol, mitochondrion, nucleus 24.09 34.41
GSMUA_Achr11P... Banana cytosol 22.36 34.4
Zm00001d016149_P001 Maize cytosol 28.08 34.39
KRH33969 Soybean cytosol 33.28 34.29
EES04840 Sorghum cytosol 28.94 34.15
Zm00001d053438_P002 Maize cytosol 28.94 34.08
KRH68586 Soybean cytosol 27.38 33.76
EES15655 Sorghum cytosol 32.76 33.51
GSMUA_Achr8P21830_001 Banana endoplasmic reticulum 24.09 33.02
Zm00001d023372_P001 Maize cytosol 30.5 31.94
TraesCS4B01G134000.1 Wheat cytosol, mitochondrion, nucleus 31.54 31.87
TraesCS4A01G184700.1 Wheat cytosol, mitochondrion, nucleus 31.02 31.68
TraesCS4D01G128900.1 Wheat cytosol, mitochondrion, nucleus 31.72 31.02
Zm00001d004931_P001 Maize cytosol, nucleus, plasma membrane 27.9 30.09
HORVU4Hr1G025770.8 Barley endoplasmic reticulum 30.68 29.3
OQU79299 Sorghum cytosol 18.37 27.11
EES07966 Sorghum cytosol, nucleus, peroxisome 22.53 25.9
OQU82864 Sorghum cytosol 20.97 25.69
KXG27723 Sorghum nucleus 26.17 25.38
AT5G27690.1 Thale cress nucleus 15.25 25.0
AT5G37860.1 Thale cress nucleus 11.09 24.43
AT1G56210.1 Thale cress nucleus 14.9 23.63
AT1G23000.2 Thale cress cytosol 14.04 19.38
GSMUA_Achr11P... Banana endoplasmic reticulum 10.75 18.73
Protein Annotations
Gene3D:3.30.70.100MapMan:35.1EntrezGene:819686ProteinID:AAF27028.1ProteinID:AEE74206.1ProteinID:AEE74207.1
EMBL:AK226941ArrayExpress:AT3G05220EnsemblPlantsGene:AT3G05220RefSeq:AT3G05220TAIR:AT3G05220RefSeq:AT3G05220-TAIR-G
EnsemblPlants:AT3G05220.1TAIR:AT3G05220.1GO:GO:0003674GO:GO:0005488GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0006810GO:GO:0008150GO:GO:0009506GO:GO:0009987
GO:GO:0019725GO:GO:0030001GO:GO:0046872GO:GO:0046914GO:GO:0046916InterPro:HMA_dom
InterPro:HMA_dom_sfInterPro:IPR006121RefSeq:NP_187173.2RefSeq:NP_974226.1PFAM:PF00403PO:PO:0000013
PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081
PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103
PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005
PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030
PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030
PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025195PO:PO:0025281
PFscan:PS50846PANTHER:PTHR22814PANTHER:PTHR22814:SF134UniProt:Q0WV37SUPFAM:SSF55008UniParc:UPI0000196B1F
SEG:seg:::::
Description
HIPP34Heavy metal-associated isoprenylated plant protein 34 [Source:UniProtKB/Swiss-Prot;Acc:Q0WV37]
Coordinates
chr3:+:1488329..1491772
Molecular Weight (calculated)
58885.9 Da
IEP (calculated)
9.050
GRAVY (calculated)
-1.014
Length
577 amino acids
Sequence
(BLAST)
001: MNKQDVMKLQ TCVLKVNVHC EGCKHKVKKQ LQKIEGVYSV KADVEQGRVT VTGNIDPALL VKKLSKSGKH AEILGGGGGG GGGGGKGFPN LNGQFANLNM
101: GGNNKPKGGK ESNQVKGKAG GGGGGGQNHG HGQPMQLNPQ QIQQMMMMKA AHGGGGGGQM KMPPMAAKDQ KKSVKFADDE DDEFSEDDYD DEDFSEDDYD
201: DDEFDDDEDD DDEMGHGHGH GGGGGNHMPP NKMMMPNKMM PQMGGHHGNG GGPKGPNEIM MMMNGFKGGG GGGKKGGGGG FEIPVQMKGM GEGKNGKDGK
301: KGKGGEKGKK EGKENKGGGK TGKTDAKSGG GGLLGFFKKG KSGNGDEKKS AGKKDGHGGN KVKSHGGGGG VQHYDSGPKK GGGGTKGGGH GGLDIDELMK
401: HSKGGGGGGN KGNHNHSAKG IGGGPMGPGG PMGPGGPMGQ GGPMGMMGPG GPMSMMGPGG PMGPMGGQGG SYPAVQGLPM SGGGGYYPGP PQASQQMNQQ
501: QYMQMMMNQQ QQQQQQQQAV AHGGYGGGHG GDMYHPMMYA RPYPAVNYAH PPPMPPPHSD SYTHMFSDEN PGSCSIM
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.