CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05148	Canola	cytosol	8.08	100.0
Bra039452.1-P	Field mustard	cytosol	98.2	90.26
CDY05147	Canola	cytosol	78.28	88.98
CDY18788	Canola	cytosol	79.35	83.71
CDY18766	Canola	cytosol	84.38	83.48
CDY66563	Canola	cytosol	62.84	81.21
AT3G05220.1	Thale cress	cytosol	83.66	80.76
CDY40701	Canola	cytosol	62.48	80.37
Solyc01g098760.2.1	Tomato	cytosol	43.09	56.21
PGSC0003DMT400073578	Potato	cytosol	41.29	52.75
CDY71358	Canola	nucleus	18.49	43.1
CDY05234	Canola	nucleus	19.21	42.97
CDY47193	Canola	cytosol	35.37	41.47
GSMUA_Achr8P00190_001	Banana	cytosol	19.03	40.15
CDY13960	Canola	cytosol	35.01	39.39
VIT_14s0128g00190.t01	Wine grape	cytosol	35.73	39.17
GSMUA_Achr8P00380_001	Banana	cytosol	28.73	39.02
CDY71877	Canola	cytosol	29.62	38.28
CDY58340	Canola	cytosol	31.24	37.91
GSMUA_Achr11P...	Banana	cytosol, extracellular	16.34	37.76
TraesCS5D01G141600.1	Wheat	cytosol	34.65	36.83
GSMUA_Achr8P08580_001	Banana	cytosol	25.31	36.72
TraesCS5A01G133900.1	Wheat	cytosol	34.11	36.47
TraesCS5B01G131600.1	Wheat	cytosol	33.93	36.42
GSMUA_Achr10P...	Banana	cytosol	27.29	36.28
Os12t0144600-01	Rice	cytosol	33.93	36.07
Os11t0147500-01	Rice	cytosol	33.21	35.92
KRG96856	Soybean	cytosol	29.08	35.53
KRG92825	Soybean	cytosol	33.75	35.47
GSMUA_Achr11P...	Banana	cytosol	23.7	35.2
GSMUA_Achr3P09060_001	Banana	cytosol, mitochondrion, nucleus	25.31	34.9
HORVU5Hr1G040920.2	Barley	cytosol	29.62	34.81
KRH33969	Soybean	cytosol	34.47	34.29
CDX92558	Canola	cytosol	34.29	34.23
GSMUA_Achr8P21830_001	Banana	endoplasmic reticulum	25.85	34.2
KRH68586	Soybean	cytosol	28.73	34.19
Zm00001d016149_P001	Maize	cytosol	28.01	33.12
EES15655	Sorghum	cytosol	33.21	32.8
EES04840	Sorghum	cytosol	28.73	32.72
Zm00001d053438_P002	Maize	cytosol	28.37	32.24
Zm00001d023372_P001	Maize	cytosol	31.06	31.4
Zm00001d017393_P001	Maize	plastid	9.34	30.95
TraesCS4B01G134000.1	Wheat	cytosol, mitochondrion, nucleus	31.6	30.82
TraesCS4A01G184700.1	Wheat	cytosol, mitochondrion, nucleus	30.7	30.27
TraesCS4D01G128900.1	Wheat	cytosol, mitochondrion, nucleus	31.6	29.83
CDY24716	Canola	cytosol	14.36	28.37
Zm00001d004931_P001	Maize	cytosol, nucleus, plasma membrane	27.11	28.22
HORVU4Hr1G025770.8	Barley	endoplasmic reticulum	30.52	28.15
OQU79299	Sorghum	cytosol	17.77	25.32
CDY53573	Canola	nucleus	15.62	25.0
EES07966	Sorghum	cytosol, nucleus, peroxisome	22.44	24.9
OQU82864	Sorghum	cytosol	21.01	24.84
CDY25027	Canola	cytosol	15.98	24.65
CDY41724	Canola	nucleus	15.62	24.65
CDY01696	Canola	cytosol	10.41	24.17
KXG27723	Sorghum	nucleus	25.49	23.87
CDX74552	Canola	cytosol	10.05	23.73
CDY04749	Canola	cytosol	15.08	23.6
CDY05566	Canola	nucleus	15.08	23.53
CDY21409	Canola	cytosol	14.9	23.25
GSMUA_Achr11P...	Banana	endoplasmic reticulum	11.67	19.64

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.1	GO:A0A078GMI3	UniProt:A0A078GMI3	EnsemblPlants:CDY27785	ProteinID:CDY27785
ProteinID:CDY27785.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0006810	GO:GO:0008150	GO:GO:0030001
GO:GO:0046872	EnsemblPlantsGene:GSBRNA2T00038591001	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121	PFAM:PF00403
PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF134	SUPFAM:SSF55008	UniParc:UPI0004EE667A	SEG:seg

Description

BnaA05g31940DBnaA05g31940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GMI3]

Coordinates

chrLK032209:-:400170..402925

Molecular Weight (calculated)

55789.0 Da

IEP (calculated)

8.534

GRAVY (calculated)

-0.977

Length

557 amino acids

Sequence
(BLAST)

001: MNKQDVMKLQ TCVLKVNVHC EGCKHKVRKQ LQKIEGVYSV KADVEQGKVT VTGNVDPAIL VKKLSKSGKH AEIIGGGGGG GGGGGGGGKG FPNLNGQFGN
101: LSMNGKGGKE SKGKPNGGGG GGGGGGGGGG GGGGGGGKDM KMMMPPMASK DQKKSVKFAE EEDDEFSDDD YDDEFSEDDY DDDEFDDEDE DDDMGGGHGH
201: GHGGGGGGNH HMPPNKMMMM PNKMGGGGGA KGPNEMMMMM NGFKAGGGGG GGEGKKGGGG FEIPVQMKGM SEGKVGKEGK KGGGEKGDKE GKKSKGGGGK
301: NGKTDAKSGG GGGGLLGFFK NGKSGKGDEK KGGGGKKEGG GGGDKVKSSG GGGGGVHHYD SGPKKGGGGG SKGGGHGSHD IDELMKHHKA GGGGGGNKGN
401: HSAKGMGGPM GQGGPMGMMG QGGPMGMMGQ GGQMGMMGHQ GGQMGPMGHQ GGSYPAVQGL PMSGGGGYYQ PPPQASHQMN QQQYMQMMMH QQQQQQQQAA
501: AHGGYGGGHG GDMYHPMMYA RPYPSVNYAH PPPMPPPHSD SYTHMFSDEN PGSCSIM

Best Arabidopsis Sequence Match ( AT3G05220.1 )
(BLAST)

001: MNKQDVMKLQ TCVLKVNVHC EGCKHKVKKQ LQKIEGVYSV KADVEQGRVT VTGNIDPALL VKKLSKSGKH AEILGGGGGG GGGGGKGFPN LNGQFANLNM
101: GGNNKPKGGK ESNQVKGKAG GGGGGGQNHG HGQPMQLNPQ QIQQMMMMKA AHGGGGGGQM KMPPMAAKDQ KKSVKFADDE DDEFSEDDYD DEDFSEDDYD
201: DDEFDDDEDD DDEMGHGHGH GGGGGNHMPP NKMMMPNKMM PQMGGHHGNG GGPKGPNEIM MMMNGFKGGG GGGKKGGGGG FEIPVQMKGM GEGKNGKDGK
301: KGKGGEKGKK EGKENKGGGK TGKTDAKSGG GGLLGFFKKG KSGNGDEKKS AGKKDGHGGN KVKSHGGGGG VQHYDSGPKK GGGGTKGGGH GGLDIDELMK
401: HSKGGGGGGN KGNHNHSAKG IGGGPMGPGG PMGPGGPMGQ GGPMGMMGPG GPMSMMGPGG PMGPMGGQGG SYPAVQGLPM SGGGGYYPGP PQASQQMNQQ
501: QYMQMMMNQQ QQQQQQQQAV AHGGYGGGHG GDMYHPMMYA RPYPAVNYAH PPPMPPPHSD SYTHMFSDEN PGSCSIM

Arabidopsis Description

HIPP34Heavy metal-associated isoprenylated plant protein 34 [Source:UniProtKB/Swiss-Prot;Acc:Q0WV37]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.