CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017393_P001	Maize	plastid	19.5	32.74
AT3G06130.1	Thale cress	cytosol	44.68	26.64
CDY71877	Canola	cytosol	39.36	25.75
GSMUA_Achr8P00190_001	Banana	cytosol	23.76	25.38
CDY47193	Canola	cytosol	41.84	24.84
CDY58340	Canola	cytosol	40.43	24.84
CDY13960	Canola	cytosol	41.13	23.43
KRH11382	Soybean	cytosol	40.78	23.37
Solyc01g080070.2.1	Tomato	cytosol	35.11	23.29
KRH51031	Soybean	cytosol	40.07	23.06
KRH20903	Soybean	cytosol	40.07	22.47
GSMUA_Achr10P...	Banana	cytosol	33.33	22.43
KRH02117	Soybean	cytosol	38.3	21.64
GSMUA_Achr11P...	Banana	cytosol, extracellular	18.44	21.58
VIT_05s0020g02690.t01	Wine grape	cytosol	37.23	21.38
GSMUA_Achr3P09060_001	Banana	cytosol, mitochondrion, nucleus	30.5	21.29
GSMUA_Achr8P00380_001	Banana	cytosol	30.14	20.73
GSMUA_Achr11P...	Banana	cytosol	27.3	20.53
CDX92558	Canola	cytosol	39.01	19.71
GSMUA_Achr8P08580_001	Banana	cytosol	26.6	19.53
PGSC0003DMT400083194	Potato	cytosol	37.23	18.58
GSMUA_Achr8P21830_001	Banana	endoplasmic reticulum	27.66	18.53
CDY40701	Canola	cytosol	27.3	17.78
CDY66563	Canola	cytosol	26.95	17.63
CDY01696	Canola	cytosol	14.54	17.08
CDX74552	Canola	cytosol	14.18	16.95
TraesCS5B01G131600.1	Wheat	cytosol	30.85	16.76
TraesCS5A01G133900.1	Wheat	cytosol	30.85	16.7
Os12t0144600-01	Rice	cytosol	30.85	16.6
Os11t0147500-01	Rice	cytosol	30.14	16.5
TraesCS5D01G141600.1	Wheat	cytosol	30.5	16.41
CDY04749	Canola	cytosol	20.57	16.29
CDY21409	Canola	cytosol	20.21	15.97
CDY25027	Canola	cytosol	20.21	15.79
CDY05566	Canola	nucleus	19.86	15.69
CDY18788	Canola	cytosol	29.08	15.53
CDY53573	Canola	nucleus	18.79	15.23
CDY41724	Canola	nucleus	18.79	15.01
CDY05147	Canola	cytosol	25.89	14.9
OQU79299	Sorghum	cytosol	20.21	14.58
CDY18766	Canola	cytosol	29.08	14.56
CDY27785	Canola	cytosol	28.37	14.36
GSMUA_Achr11P...	Banana	endoplasmic reticulum	16.67	14.2
TraesCS4B01G134000.1	Wheat	cytosol, mitochondrion, nucleus	28.72	14.19
Zm00001d016149_P001	Maize	cytosol	23.4	14.01
EES15655	Sorghum	cytosol	28.01	14.01
Zm00001d023372_P001	Maize	cytosol	27.3	13.97
TraesCS4D01G128900.1	Wheat	cytosol, mitochondrion, nucleus	28.72	13.73
TraesCS4A01G184700.1	Wheat	cytosol, mitochondrion, nucleus	27.3	13.63
EES04840	Sorghum	cytosol	23.4	13.5
Zm00001d053438_P002	Maize	cytosol	23.4	13.47
HORVU4Hr1G025770.8	Barley	endoplasmic reticulum	26.6	12.42
Zm00001d004931_P001	Maize	cytosol, nucleus, plasma membrane	23.05	12.15
HORVU5Hr1G040920.2	Barley	cytosol	19.5	11.6
EES07966	Sorghum	cytosol, nucleus, peroxisome	20.21	11.35
OQU82864	Sorghum	cytosol	18.79	11.25
CDY05148	Canola	cytosol	1.77	11.11
CDY71358	Canola	nucleus	8.16	9.62
KXG27723	Sorghum	nucleus	19.5	9.24
CDY05234	Canola	nucleus	7.8	8.84

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.1	GO:A0A078GH69	UniProt:A0A078GH69	EnsemblPlants:CDY24716	ProteinID:CDY24716
ProteinID:CDY24716.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0006810	GO:GO:0008150	GO:GO:0030001
GO:GO:0046872	EnsemblPlantsGene:GSBRNA2T00027105001	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121	PFAM:PF00403
PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF261	SUPFAM:SSF55008	UniParc:UPI0004EE25CE	SEG:seg

Description

BnaA05g31150DBnaA05g31150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GH69]

Coordinates

chrLK032162:+:598670..600134

Molecular Weight (calculated)

17608.3 Da

IEP (calculated)

10.616

GRAVY (calculated)

-0.383

Length

282 amino acids

Sequence
(BLAST)

001: MSKEEFMKIQ TCVLKVNIHC DGCKQKVKKI LQKIEGVFTT KIDSEQGKVT VSGSVDPSVL IKKLAKSGKH AEIWGAPKGN NNNQNQLANQ MKGMQIDNGK
101: GVGGKNNNNN NKAPKNGGGG GGGGGGGGGN RNAPXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
201: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX LLLYIYCNKK KKFTLPQPSA TANVSWSQLL NL

Best Arabidopsis Sequence Match ( AT3G06130.1 )
(BLAST)

001: MSKEEFMKIQ TCVLKVNIHC DGCKQKVKKI LQKIEGVFTT KIDSEQGKVT VSGSVDPSVL IKKLAKSGKH AEIWGAPKGN NNPNQSQMAN QFKGMQIDHG
101: KAGGGGGGNN NNNKKGQKNG GGGGGGGGGG NSNAPKMGQQ LNPQHLQQLQ QLQKMKGFQD LKLPPQLKGS VPVNKNQNQK GVKFDVPEDD DDDDFSDEFD
201: DEFTDDDDDE FDDEFDDLPL PSNKMKPNMT MMPNAQQMMM NAQKNANLAG GPAKNGGKGA PAAGGGGAGG GKGAGGGAKG GPGNQNQGGG KNGGGGHPQD
301: GKNGGGGGGP NAGKKGNGGG GPMAGGVSGG FRPMGGGGPQ NMSMPMGGQM GMGGPMGNMP AVQGLPATGP GGAPQGYFQG AGIDPMQMQQ QQQQQQYLAA
401: VMNQQRAMGN ERFQPMMYAR PPPAVNYMPP NPHQYPNPHP YPYPYPYPYP PPYGNDQYSH AFSDENTSSC DIM

Arabidopsis Description

HIPP32Heavy metal-associated isoprenylated plant protein 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8K5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.