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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 3
  • cytosol 2
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, peroxisome, plastid
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:cytosol
PProwler:plastid
TargetP:plastid
WoLF PSORT:peroxisome
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY13960 Canola cytosol 77.24 87.07
Bra002209.1-P Field mustard cytosol, peroxisome, plastid, vacuole 88.89 74.81
AT5G19090.1 Thale cress cytosol 77.6 73.76
CDY47193 Canola cytosol 62.37 73.26
CDY05234 Canola nucleus 28.32 63.45
CDY71358 Canola nucleus 26.16 61.09
CDY71877 Canola cytosol 45.88 59.4
CDY05148 Canola cytosol 4.66 57.78
CDY58340 Canola cytosol 47.49 57.73
KRH51031 Soybean cytosol 48.39 55.1
KRH11382 Soybean cytosol 47.67 54.06
KRH02117 Soybean cytosol 47.31 52.91
KRH20903 Soybean cytosol 47.67 52.88
VIT_05s0020g02690.t01 Wine grape cytosol 43.37 49.29
Solyc01g080070.2.1 Tomato cytosol 35.13 46.12
GSMUA_Achr8P00190_001 Banana cytosol 21.68 45.83
PGSC0003DMT400083194 Potato cytosol 44.27 43.72
GSMUA_Achr3P09060_001 Banana cytosol, mitochondrion, nucleus 30.29 41.83
Zm00001d017393_P001 Maize plastid 12.37 41.07
GSMUA_Achr8P00380_001 Banana cytosol 28.67 39.02
CDY24716 Canola cytosol 19.71 39.01
GSMUA_Achr8P21830_001 Banana endoplasmic reticulum 29.21 38.72
GSMUA_Achr11P... Banana cytosol, extracellular 16.67 38.59
GSMUA_Achr8P08580_001 Banana cytosol 26.52 38.54
GSMUA_Achr10P... Banana cytosol 28.67 38.19
Os11t0147500-01 Rice cytosol 34.41 37.28
CDY66563 Canola cytosol 28.67 37.12
Os12t0144600-01 Rice cytosol 34.41 36.64
CDY40701 Canola cytosol 28.32 36.49
TraesCS5B01G131600.1 Wheat cytosol 33.51 36.03
GSMUA_Achr11P... Banana cytosol 24.19 36.0
TraesCS5D01G141600.1 Wheat cytosol 33.69 35.88
TraesCS5A01G133900.1 Wheat cytosol 33.33 35.7
Zm00001d016149_P001 Maize cytosol 29.57 35.03
Zm00001d053438_P002 Maize cytosol 30.47 34.69
EES04840 Sorghum cytosol 30.29 34.56
CDY27785 Canola cytosol 34.23 34.29
CDY18766 Canola cytosol 34.23 33.93
CDY05147 Canola cytosol 29.21 33.27
CDY18788 Canola cytosol 31.0 32.77
HORVU5Hr1G040920.2 Barley cytosol 27.6 32.49
EES15655 Sorghum cytosol 32.44 32.09
Zm00001d023372_P001 Maize cytosol 31.18 31.58
TraesCS4A01G184700.1 Wheat cytosol, mitochondrion, nucleus 31.18 30.8
TraesCS4B01G134000.1 Wheat cytosol, mitochondrion, nucleus 31.36 30.65
TraesCS4D01G128900.1 Wheat cytosol, mitochondrion, nucleus 32.08 30.34
HORVU4Hr1G025770.8 Barley endoplasmic reticulum 31.54 29.14
CDY04749 Canola cytosol 18.46 28.93
Zm00001d004931_P001 Maize cytosol, nucleus, plasma membrane 27.6 28.79
CDY21409 Canola cytosol 18.1 28.29
OQU82864 Sorghum cytosol 22.76 26.96
OQU79299 Sorghum cytosol 18.64 26.6
KXG27723 Sorghum nucleus 27.6 25.88
CDY25027 Canola cytosol 16.67 25.76
CDX74552 Canola cytosol 10.75 25.42
CDY01696 Canola cytosol 10.93 25.42
CDY05566 Canola nucleus 15.77 24.65
CDY41724 Canola nucleus 15.59 24.65
CDY53573 Canola nucleus 15.23 24.43
EES07966 Sorghum cytosol, nucleus, peroxisome 21.15 23.51
GSMUA_Achr11P... Banana endoplasmic reticulum 10.93 18.43
Protein Annotations
EnsemblPlants:CDX92558EnsemblPlantsGene:GSBRNA2T00154346001Gene3D:3.30.70.100GO:A0A078DZ68GO:GO:0003674GO:GO:0005488
GO:GO:0006810GO:GO:0008150GO:GO:0030001GO:GO:0046872InterPro:HMA_domInterPro:HMA_dom_sf
InterPro:IPR006121PANTHER:PTHR22814PANTHER:PTHR22814:SF134PFAM:PF00403PFscan:PS50846ProteinID:CDX92558
ProteinID:CDX92558.1SEG:segSUPFAM:SSF55008UniParc:UPI0004EE0D7EMapMan:35.1:
Description
BnaA10g15970D
Coordinates
chrLK031872:-:1249033..1252024
Molecular Weight (calculated)
58455.4 Da
IEP (calculated)
7.598
GRAVY (calculated)
-0.894
Length
558 amino acids
Sequence
(BLAST)
001: MHAPFGLVMA INTMSHISKA YCNRSSKCFI TNARSIPTDE DMSVINYAGK QHDVSRTLNP HRGSRSPNMI QGTTKMSKEE FMKIQTCVLK VNIHCDGCKQ
101: KVKKILQKIE GVFTTKIDAE QGKVTVSGNV DPSVLIKKLL KSGKHAEIWG APKANNTNQN QPNLANQLKG MQIDHGGKGG GGGGGGNNNK GQKGGGGGGG
201: GGGGPPKMIL PQLTPQQMQQ LNPQQLQQLQ QLQQMKAFQD LKLPPPQLKG PGPGSVPMNK NPQNPNQKAV KFDVPEDDDD DFSDDDEFDD DEFDDDDELD
301: DDEFDDHPPP NKMKPMMGGG GGNMMMPNMM MMPNAQNNGG GGGGKNGGKN GGGPPLDVKN GGGGGGPNGN NKGGGQMIGG PNGGKKGGAG GGGGGGGGGG
401: PMGGGLPPGF RPLGGGNGGP QTMNMPMGGP MGSLPSMGGG PGPMGNNMQA VQGLPAMGPG GGGGGQDSMP GNPYLQQQQQ QQQQQYLAAV MNQQRAMGNE
501: RFQPMMYARP PPEVNYLPPQ PHQQHPYPYP YPYPYPPHGG DQYSNYFNDE NTSSCNIM
Best Arabidopsis Sequence Match ( AT5G19090.1 )
(BLAST)
001: MSKEEFMKIQ TCVLKVNIHC DGCKQKVKKI LQKIEGVFTT KIDAELGKVT VSGNVDPSVL IKKLLKSGKH AEIWGAPKGG SNNNQNQPNL ANQFKAMQID
101: HGGKGGGGGG GGPANNNKGQ KIGGGGGGGG GGGGGGGGGP PKMVIPQLTP QQMQQLNPQQ LQQLQQLQQM KGFQDLKLPP QLKGGPGPGP GSVPMNKNPQ
201: MPNNPNQKAV KFNVPDDDDE EDFSDEFDDE FDEDDDEFDD DLEDDEFDDH PPPPNKMKPM MGGGNMIMPN NMMPNMMMPN AQQMLNAHKN GGGPGPAGGK
301: IEGKGMPFPV QMGGGGGGPG GKKGGPGGGG GNMGNQNQGG GGKNGGKGGG GHPLDGKMGG GGGGPNGNKG GGGVQMNGGP NGGKKGGGGG GGGGGGPMSG
401: GLPPGFRPMG GGGGGGGGPQ SMSMPMGGAM GGPMGSLPQM GGGPGPMSNN MQAVQGLPAM GPGGGGGGGP SAEAPPGYFQ GQVSGNGGGG QDSMPGNPYL
501: QQQQQQQQQQ YLAAVMNQQR SMGNERFQPM MYARPPPAVN YMPPQPQPHQ QHPYPYPYPY PPQYPPHNGD QYSDYFNDEN TSSCNIM
Arabidopsis Description
HIPP33Heavy metal-associated isoprenylated plant protein 33 [Source:UniProtKB/Swiss-Prot;Acc:F4JZL7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.