CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92558	Canola	cytosol	87.07	77.24
AT5G19090.1	Thale cress	cytosol	87.07	73.42
CDY47193	Canola	cytosol	69.7	72.63
Bra002209.1-P	Field mustard	cytosol, peroxisome, plastid, vacuole	93.74	69.98
CDY05234	Canola	nucleus	32.93	65.46
CDY71358	Canola	nucleus	31.52	65.27
CDY71877	Canola	cytosol	53.54	61.48
CDY58340	Canola	cytosol	54.75	59.04
KRH51031	Soybean	cytosol	56.97	57.55
CDY05148	Canola	cytosol	5.05	55.56
KRH02117	Soybean	cytosol	55.76	55.31
KRH11382	Soybean	cytosol	54.75	55.08
KRH20903	Soybean	cytosol	54.95	54.08
VIT_05s0020g02690.t01	Wine grape	cytosol	51.31	51.73
Solyc01g080070.2.1	Tomato	cytosol	40.4	47.06
GSMUA_Achr8P00190_001	Banana	cytosol	25.05	46.97
PGSC0003DMT400083194	Potato	cytosol	50.3	44.07
GSMUA_Achr3P09060_001	Banana	cytosol, mitochondrion, nucleus	35.15	43.07
GSMUA_Achr8P00380_001	Banana	cytosol	35.56	42.93
Zm00001d017393_P001	Maize	plastid	14.34	42.26
GSMUA_Achr10P...	Banana	cytosol	35.56	42.0
GSMUA_Achr8P08580_001	Banana	cytosol	32.53	41.93
CDY24716	Canola	cytosol	23.43	41.13
GSMUA_Achr11P...	Banana	cytosol, extracellular	19.8	40.66
GSMUA_Achr8P21830_001	Banana	endoplasmic reticulum	34.55	40.62
GSMUA_Achr11P...	Banana	cytosol	30.3	40.0
Os11t0147500-01	Rice	cytosol	40.2	38.64
Os12t0144600-01	Rice	cytosol	40.81	38.55
TraesCS5D01G141600.1	Wheat	cytosol	40.61	38.36
TraesCS5B01G131600.1	Wheat	cytosol	40.2	38.34
TraesCS5A01G133900.1	Wheat	cytosol	40.2	38.2
CDY66563	Canola	cytosol	33.13	38.05
CDY40701	Canola	cytosol	32.73	37.41
Zm00001d016149_P001	Maize	cytosol	34.55	36.31
HORVU5Hr1G040920.2	Barley	cytosol	33.94	35.44
Zm00001d053438_P002	Maize	cytosol	34.95	35.31
EES04840	Sorghum	cytosol	34.75	35.17
CDY27785	Canola	cytosol	39.39	35.01
CDY18766	Canola	cytosol	39.6	34.81
CDY18788	Canola	cytosol	36.16	33.9
CDY05147	Canola	cytosol	33.54	33.88
EES15655	Sorghum	cytosol	38.18	33.51
Zm00001d023372_P001	Maize	cytosol	36.57	32.85
TraesCS4B01G134000.1	Wheat	cytosol, mitochondrion, nucleus	37.58	32.57
TraesCS4A01G184700.1	Wheat	cytosol, mitochondrion, nucleus	37.17	32.57
TraesCS4D01G128900.1	Wheat	cytosol, mitochondrion, nucleus	38.18	32.03
Zm00001d004931_P001	Maize	cytosol, nucleus, plasma membrane	32.73	30.28
HORVU4Hr1G025770.8	Barley	endoplasmic reticulum	36.57	29.97
OQU82864	Sorghum	cytosol	27.07	28.45
OQU79299	Sorghum	cytosol	22.42	28.39
CDY04749	Canola	cytosol	20.2	28.09
CDY21409	Canola	cytosol	19.8	27.45
KXG27723	Sorghum	nucleus	32.12	26.72
CDY25027	Canola	cytosol	18.99	26.04
CDY41724	Canola	nucleus	18.18	25.5
CDY53573	Canola	nucleus	17.78	25.29
CDY05566	Canola	nucleus	18.18	25.21
EES07966	Sorghum	cytosol, nucleus, peroxisome	25.25	24.9
CDY01696	Canola	cytosol	11.92	24.58
CDX74552	Canola	cytosol	11.72	24.58
GSMUA_Achr11P...	Banana	endoplasmic reticulum	12.53	18.73

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.1	GO:A0A078FHP0	UniProt:A0A078FHP0	InterPro:ARM-type_fold	EnsemblPlants:CDY13960
ProteinID:CDY13960	ProteinID:CDY13960.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0006810	GO:GO:0008150
GO:GO:0030001	GO:GO:0046872	EnsemblPlantsGene:GSBRNA2T00078461001	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121
PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF134	SUPFAM:SSF48371	SUPFAM:SSF55008
UniParc:UPI0004EEB393	SEG:seg	:	:	:	:

Description

BnaC09g38660DBnaC09g38660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FHP0]

Coordinates

chrLK032039:+:498113..500201

Molecular Weight (calculated)

50977.9 Da

IEP (calculated)

6.514

GRAVY (calculated)

-0.946

Length

495 amino acids

Sequence
(BLAST)

001: MSKEEFMKIQ TCVLKVNIHC DGCKQKVKKI LQKIEGVFTT KIDAEQGKVT VSGNVDPSVL IKKLLKSGKH AEIWGAPKAN NTNQNQPNLA NQLKGMQIDH
101: GGKGGGGGNN NKGQKGGCGG GGGGGGGGGG GGAPPPKMIL PQLTPQQMQQ LNPQQLQQLQ QLQQMKAFQD LKLPPPQLKG PGPGSVPMNK NSQNPNQKAV
201: KFDVPEEDDD DFSDDDEFDD DEFDDDNEFD DELDDDEFDD RPPPNKMKPM MGGGGGNGGM KGGLPGGGGG NVGNPNQGGG KNGGKNGGGG GHPLDVKNGG
301: GGGGPSGNNK GGGQMIGGPN GGKKGGAGGG GGGPMGGGLP PGFRPIGGGN GGPPTMNMPM GSLPSMGGGS GPMGNNMQAV QGLPAMGPGG GGGGSAAGAP
401: PGYFQGHGNP YLQQQQQQQQ QQYLTAVMNQ QRAMGNERFQ PMMYARPPPD VNYLPPQPHQ QHPYSYPYPY PYPPHGGDQY SNYFNDENTS SCNIM

Best Arabidopsis Sequence Match ( AT5G19090.1 )
(BLAST)

001: MSKEEFMKIQ TCVLKVNIHC DGCKQKVKKI LQKIEGVFTT KIDAELGKVT VSGNVDPSVL IKKLLKSGKH AEIWGAPKGG SNNNQNQPNL ANQFKAMQID
101: HGGKGGGGGG GGPANNNKGQ KIGGGGGGGG GGGGGGGGGP PKMVIPQLTP QQMQQLNPQQ LQQLQQLQQM KGFQDLKLPP QLKGGPGPGP GSVPMNKNPQ
201: MPNNPNQKAV KFNVPDDDDE EDFSDEFDDE FDEDDDEFDD DLEDDEFDDH PPPPNKMKPM MGGGNMIMPN NMMPNMMMPN AQQMLNAHKN GGGPGPAGGK
301: IEGKGMPFPV QMGGGGGGPG GKKGGPGGGG GNMGNQNQGG GGKNGGKGGG GHPLDGKMGG GGGGPNGNKG GGGVQMNGGP NGGKKGGGGG GGGGGGPMSG
401: GLPPGFRPMG GGGGGGGGPQ SMSMPMGGAM GGPMGSLPQM GGGPGPMSNN MQAVQGLPAM GPGGGGGGGP SAEAPPGYFQ GQVSGNGGGG QDSMPGNPYL
501: QQQQQQQQQQ YLAAVMNQQR SMGNERFQPM MYARPPPAVN YMPPQPQPHQ QHPYPYPYPY PPQYPPHNGD QYSDYFNDEN TSSCNIM

Arabidopsis Description

HIPP33Heavy metal-associated isoprenylated plant protein 33 [Source:UniProtKB/Swiss-Prot;Acc:F4JZL7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.