CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58340	Canola	cytosol	96.06	90.2
Bra001184.1-P	Field mustard	cytosol	95.59	87.29
CDY05234	Canola	nucleus	36.89	63.86
CDY71358	Canola	nucleus	33.41	60.25
CDY13960	Canola	cytosol	61.48	53.54
CDY05148	Canola	cytosol	5.34	51.11
CDY47193	Canola	cytosol	55.45	50.32
KRH11382	Soybean	cytosol	54.52	47.76
KRH51031	Soybean	cytosol	53.6	47.14
CDX92558	Canola	cytosol	59.4	45.88
VIT_05s0020g02690.t01	Wine grape	cytosol	51.74	45.42
KRH02117	Soybean	cytosol	52.44	45.29
KRH20903	Soybean	cytosol	52.67	45.13
GSMUA_Achr8P00190_001	Banana	cytosol	25.99	42.42
Solyc01g080070.2.1	Tomato	cytosol	41.07	41.65
CDY24716	Canola	cytosol	25.75	39.36
GSMUA_Achr10P...	Banana	cytosol	36.19	37.23
GSMUA_Achr3P09060_001	Banana	cytosol, mitochondrion, nucleus	34.57	36.88
PGSC0003DMT400083194	Potato	cytosol	48.03	36.64
GSMUA_Achr8P21830_001	Banana	endoplasmic reticulum	34.34	35.15
GSMUA_Achr11P...	Banana	cytosol, extracellular	19.49	34.85
GSMUA_Achr8P00380_001	Banana	cytosol	32.95	34.63
Zm00001d017393_P001	Maize	plastid	13.23	33.93
GSMUA_Achr8P08580_001	Banana	cytosol	29.7	33.33
CDY66563	Canola	cytosol	33.18	33.18
CDY40701	Canola	cytosol	33.18	33.03
GSMUA_Achr11P...	Banana	cytosol	28.31	32.53
TraesCS5A01G133900.1	Wheat	cytosol	37.82	31.29
TraesCS5D01G141600.1	Wheat	cytosol	37.59	30.92
TraesCS5B01G131600.1	Wheat	cytosol	36.89	30.64
Os12t0144600-01	Rice	cytosol	37.12	30.53
Os11t0147500-01	Rice	cytosol	36.43	30.49
CDY27785	Canola	cytosol	38.28	29.62
CDY18788	Canola	cytosol	36.19	29.55
CDY18766	Canola	cytosol	38.52	29.48
EES15655	Sorghum	cytosol	36.19	27.66
Zm00001d053438_P002	Maize	cytosol	31.32	27.55
HORVU5Hr1G040920.2	Barley	cytosol	30.16	27.43
Zm00001d023372_P001	Maize	cytosol	35.03	27.4
Zm00001d016149_P001	Maize	cytosol	29.93	27.39
EES04840	Sorghum	cytosol	30.86	27.2
CDY05147	Canola	cytosol	30.86	27.14
CDY04749	Canola	cytosol	21.81	26.4
CDY21409	Canola	cytosol	21.35	25.77
OQU79299	Sorghum	cytosol	23.2	25.58
CDX74552	Canola	cytosol	13.69	25.0
CDY01696	Canola	cytosol	13.92	25.0
TraesCS4B01G134000.1	Wheat	cytosol, mitochondrion, nucleus	32.95	24.87
Zm00001d004931_P001	Maize	cytosol, nucleus, plasma membrane	30.86	24.86
TraesCS4A01G184700.1	Wheat	cytosol, mitochondrion, nucleus	32.02	24.42
TraesCS4D01G128900.1	Wheat	cytosol, mitochondrion, nucleus	33.41	24.41
CDY25027	Canola	cytosol	19.49	23.27
CDY05566	Canola	nucleus	19.26	23.25
HORVU4Hr1G025770.8	Barley	endoplasmic reticulum	32.48	23.18
CDY53573	Canola	nucleus	18.56	22.99
CDY41724	Canola	nucleus	18.79	22.95
OQU82864	Sorghum	cytosol	24.59	22.51
EES07966	Sorghum	cytosol, nucleus, peroxisome	25.29	21.71
KXG27723	Sorghum	nucleus	29.23	21.18
GSMUA_Achr11P...	Banana	endoplasmic reticulum	14.85	19.34

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.1	GO:A0A078K1U0	UniProt:A0A078K1U0	EnsemblPlants:CDY71877	ProteinID:CDY71877
ProteinID:CDY71877.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0006810	GO:GO:0008150	GO:GO:0030001
GO:GO:0046872	EnsemblPlantsGene:GSBRNA2T00020990001	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121	PFAM:PF00403
PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF134	SUPFAM:SSF55008	UniParc:UPI0004EE610D	SEG:seg

Description

BnaCnng74900DBnaCnng74900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078K1U0]

Coordinates

chrLK047922:-:512..2231

Molecular Weight (calculated)

46084.1 Da

IEP (calculated)

6.392

GRAVY (calculated)

-0.919

Length

431 amino acids

Sequence
(BLAST)

001: MSKEEFMNIQ TCVLKVNIHC EGCKQKVKKI LHKIEGVFTT KIDADQGKVT VSVSGSVDPS VLIEKLAKSG KHAEVWGAPK GNNNPNQSHD SHLVNQLKGR
101: QIDNKKGSGG KNNNNDKCPK NVGSGGGGNN PHQIQKMKGF QDMKLPQQLK DLNGSVPENK NQKQPGAKFN VPEEEEDDYF SDDDDEFTDV GDEDSDDDEF
201: DDLPSPSNKM KPNMMMPNNQ QMMMNANLGG GPTKNGGKGV YGGGGGKGDS GGAGNQNQGG GKNGGQNANG VHQQDGKNGG GPNVGGGGLP AGFLPMGGGV
301: PPNMSMPIGG LMGMGGLMGN IPAVHGLPAT GASGIPPGYF QRAGPDPIQM QHQQQQQQYL AAVMNQQRAM ENERFQPMMY ARPPLAVNYM PPHIHLHQYP
401: NPYDPYPYPP HGNDQYSHVS NEENTSSCDI M

Best Arabidopsis Sequence Match ( AT3G06130.2 )
(BLAST)

001: MSKEEFMKIQ TCVLKVNIHC DGCKQKVKKI LQKIEGVFTT KIDSEQGKVT VSGSVDPSVL IKKLAKSGKH AEIWGAPKGN NNPNQSQMAN QFKGMQIDHG
101: KAGGGGGGNN NNNKKGQKNG GGGGGGGGGG NSNAPKMGQQ LNPQHLQQLQ QLQKMKGFQD LKLPPQLKGS VPVNKNQNQK GVKFDVPEDD DDDDFSDEFD
201: DEFTDDDDDE FDDEFDDLPL PSNKMKPNMT MMPNAQQMMM NAQKNANLAG GPAKNGGKGA PAAGGGGAGG GKGAGGGAKG GPGNQNQGGG KNGGGGHPQD
301: GKNGGGGGGP NAGKKATTTA IFSGGYEPAT SYGERTVPTN DVRKATTGS

Arabidopsis Description

HIPP32Heavy metal-associated isoprenylated plant protein 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8K5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.