Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY25027 | Canola | cytosol | 77.84 | 75.9 |
| Bra020580.1-P | Field mustard | nucleus | 76.7 | 75.21 |
| CDY05566 | Canola | nucleus | 75.85 | 74.79 |
| Solyc01g066880.2.1 | Tomato | cytosol | 34.38 | 38.53 |
| PGSC0003DMT400029504 | Potato | nucleus | 33.81 | 38.51 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum | 19.32 | 28.45 |
| VIT_14s0060g02090.t01 | Wine grape | cytosol | 28.12 | 28.29 |
| GSMUA_Achr5P21400_001 | Banana | cytosol | 23.86 | 27.54 |
| KRH33893 | Soybean | cytosol | 28.98 | 27.13 |
| AT1G56210.1 | Thale cress | nucleus | 27.27 | 26.37 |
| GSMUA_Achr1P24670_001 | Banana | cytosol | 21.59 | 25.94 |
| KRH68524 | Soybean | cytosol | 25.57 | 25.57 |
| TraesCS1D01G234000.1 | Wheat | cytosol | 21.59 | 24.6 |
| TraesCS1A01G232800.1 | Wheat | cytosol | 21.31 | 24.59 |
| TraesCS1B01G245900.1 | Wheat | cytosol | 21.31 | 24.43 |
| OQU90456 | Sorghum | cytosol | 24.15 | 24.43 |
| TraesCS2D01G115700.1 | Wheat | cytosol | 23.3 | 23.84 |
| Zm00001d022474_P001 | Maize | cytosol | 22.16 | 23.71 |
| TraesCS2B01G134100.1 | Wheat | cytosol | 23.01 | 23.68 |
| TraesCS2A01G114900.1 | Wheat | cytosol | 23.01 | 23.68 |
| GSMUA_Achr11P... | Banana | cytosol | 21.59 | 23.53 |
| Os07t0671400-01 | Rice | cytosol | 19.6 | 23.31 |
| Zm00001d007130_P001 | Maize | cytosol | 21.02 | 23.27 |
| TraesCS3D01G444600.1 | Wheat | cytosol | 21.02 | 22.63 |
| TraesCS3A01G452100.1 | Wheat | cytosol | 21.02 | 22.16 |
| TraesCS3B01G489000.1 | Wheat | cytosol | 21.02 | 22.16 |
| Os01t0933200-00 | Rice | cytosol | 20.17 | 21.13 |
| TraesCS7B01G462300.1 | Wheat | cytosol | 14.49 | 21.07 |
| Os05t0368600-01 | Rice | cytosol | 20.17 | 20.88 |
| HORVU3Hr1G097770.1 | Barley | cytosol | 19.32 | 20.36 |
| TraesCS5A01G030900.2 | Wheat | cytosol | 19.32 | 20.18 |
| TraesCS5B01G030300.1 | Wheat | cytosol | 19.32 | 19.71 |
| Zm00001d042225_P002 | Maize | endoplasmic reticulum, vacuole | 20.74 | 19.26 |
| AT5G37860.1 | Thale cress | nucleus | 14.2 | 19.08 |
| HORVU7Hr1G118340.7 | Barley | cytosol, endoplasmic reticulum, plastid | 21.88 | 18.64 |
| HORVU4Hr1G046610.1 | Barley | cytosol, mitochondrion, nucleus | 19.6 | 18.6 |
| HORVU1Hr1G058350.3 | Barley | cytosol | 16.19 | 18.27 |
| AT3G06130.1 | Thale cress | cytosol | 24.43 | 18.18 |
| TraesCS5D01G039100.2 | Wheat | plastid | 19.6 | 18.11 |
| KXG34066 | Sorghum | cytosol, plastid | 21.31 | 18.07 |
| Zm00001d047492_P001 | Maize | cytosol | 17.61 | 17.87 |
| GSMUA_Achr8P10080_001 | Banana | endoplasmic reticulum | 20.74 | 17.46 |
| AT5G19090.1 | Thale cress | cytosol | 26.42 | 15.84 |
| AT1G23000.2 | Thale cress | cytosol | 18.75 | 15.79 |
| KXG39397 | Sorghum | cytosol | 19.03 | 15.73 |
| AT3G05220.1 | Thale cress | cytosol | 25.0 | 15.25 |
| Os03t0345700-01 | Rice | cytosol, nucleus | 10.51 | 14.8 |
| Zm00001d029126_P001 | Maize | nucleus | 18.47 | 14.07 |
| HORVU2Hr1G019950.2 | Barley | plastid | 13.92 | 10.54 |
Protein Annotations
| Gene3D:3.30.70.100 | MapMan:35.1 | EntrezGene:832831 | EMBL:AC069556 | ProteinID:AED93715.1 | ArrayExpress:AT5G27690 |
| EnsemblPlantsGene:AT5G27690 | RefSeq:AT5G27690 | TAIR:AT5G27690 | RefSeq:AT5G27690-TAIR-G | EnsemblPlants:AT5G27690.1 | TAIR:AT5G27690.1 |
| EMBL:BT003873 | EMBL:BT005500 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 |
| GO:GO:0030001 | GO:GO:0046872 | GO:GO:0046914 | GO:GO:0046916 | InterPro:HMA_dom | InterPro:HMA_dom_sf |
| InterPro:IPR006121 | RefSeq:NP_198121.1 | PFAM:PF00403 | PO:PO:0000293 | PFscan:PS50846 | PANTHER:PTHR22814 |
| PANTHER:PTHR22814:SF180 | UniProt:Q84J88 | SUPFAM:SSF55008 | UniParc:UPI000000C1B5 | SEG:seg | : |
Description
HIPP36Heavy metal-associated isoprenylated plant protein 36 [Source:UniProtKB/Swiss-Prot;Acc:Q84J88]
Coordinates
chr5:+:9803647..9805266
Molecular Weight (calculated)
38702.8 Da
IEP (calculated)
6.869
GRAVY (calculated)
-1.071
Length
352 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLGTEIKSD TRQEEQRHVF EDYPEPLRYT TWVLRVSIHC EGCKRKIKKI LSKIDGVYTT NIDVKQQKVT VIGNVEPEIL IKKIMKAGRH AELWPTSMEN
101: NINNDCNYQK KPKKDNEETS GDEDDDENNN NNNGGGDVGG GGGGGGGNFD QVKQVVTFVN GQLQPQGDGA PKKKKKKKKK KKSLGNTTVV MEGGGGGGGG
201: GGPPQNDGPP ETVIYSAPQD HHIIHGPPPH LHHHQQQNHP YPTVHSPPRH HPQQMYGPGP GLPPPSFYHT QPQTAPSYTV SYNTVHGPIN NGGNETASYY
301: TAPPSHPTSY YSYEYVDTGY ESPPPEFYSY RSQPSESFES LSEGNPNSCC VM
101: NINNDCNYQK KPKKDNEETS GDEDDDENNN NNNGGGDVGG GGGGGGGNFD QVKQVVTFVN GQLQPQGDGA PKKKKKKKKK KKSLGNTTVV MEGGGGGGGG
201: GGPPQNDGPP ETVIYSAPQD HHIIHGPPPH LHHHQQQNHP YPTVHSPPRH HPQQMYGPGP GLPPPSFYHT QPQTAPSYTV SYNTVHGPIN NGGNETASYY
301: TAPPSHPTSY YSYEYVDTGY ESPPPEFYSY RSQPSESFES LSEGNPNSCC VM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.