CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042225_P002	Maize	endoplasmic reticulum, vacuole	69.64	76.25
Os01t0933200-00	Rice	cytosol	50.84	62.8
TraesCS3B01G489000.1	Wheat	cytosol	48.19	59.88
TraesCS3D01G444600.1	Wheat	cytosol	46.99	59.63
TraesCS3A01G452100.1	Wheat	cytosol	47.71	59.28
HORVU3Hr1G097770.1	Barley	cytosol	47.47	58.98
GSMUA_Achr11P...	Banana	endoplasmic reticulum	20.96	36.4
GSMUA_Achr5P21400_001	Banana	cytosol	23.86	32.46
GSMUA_Achr11P...	Banana	cytosol	25.06	32.2
OQU90456	Sorghum	cytosol	25.3	30.17
GSMUA_Achr1P24670_001	Banana	cytosol	20.72	29.35
VIT_14s0060g02090.t01	Wine grape	cytosol	23.61	28.0
KRH37116	Soybean	cytosol	17.35	26.77
VIT_05s0020g01450.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	19.04	25.82
KXG39397	Sorghum	cytosol	25.78	25.12
EES17720	Sorghum	nucleus	22.17	24.8
Solyc01g099600.2.1	Tomato	cytosol	21.93	24.27
GSMUA_Achr8P10080_001	Banana	endoplasmic reticulum	24.34	24.16
KRH50862	Soybean	cytosol	17.11	24.15
KRH02248	Soybean	cytosol	17.11	24.07
PGSC0003DMT400063687	Potato	cytosol	21.2	23.66
Solyc01g066880.2.1	Tomato	cytosol	17.83	23.57
KRH33893	Soybean	cytosol	21.2	23.4
CDY41724	Canola	nucleus	19.28	22.66
Bra027947.1-P	Field mustard	nucleus	19.28	22.66
PGSC0003DMT400029504	Potato	nucleus	16.87	22.65
CDY53573	Canola	nucleus	18.8	22.41
AT1G56210.1	Thale cress	nucleus	19.28	21.98
KRH68524	Soybean	cytosol	18.55	21.88
AT5G27690.1	Thale cress	nucleus	18.07	21.31
CDY05566	Canola	nucleus	17.83	20.73
Bra020580.1-P	Field mustard	nucleus	17.83	20.61
CDY25027	Canola	cytosol	17.83	20.5
KRH12046	Soybean	cytosol	16.87	19.39
EES04840	Sorghum	cytosol	19.28	16.36
OQU79299	Sorghum	cytosol	13.73	14.58
EES15655	Sorghum	cytosol	19.52	14.36
EES02570	Sorghum	cytosol	15.42	14.32
EES07966	Sorghum	cytosol, nucleus, peroxisome	17.11	14.14
OQU82864	Sorghum	cytosol	14.94	13.16
KXG27723	Sorghum	nucleus	17.83	12.44

Protein Annotations

EnsemblPlants:KXG34066	EnsemblPlantsGene:SORBI_3003G415900	Gene3D:3.30.70.100	GO:GO:0003674	GO:GO:0005488	GO:GO:0006810
GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121
PANTHER:PTHR22814	PANTHER:PTHR22814:SF124	PFAM:PF00403	PFscan:PS50846	ProteinID:KXG34066	ProteinID:KXG34066.1
SEG:seg	SUPFAM:SSF55008	UniParc:UPI00081AD525	UniProt:A0A1B6Q827	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr3:-:72215976..72218239

Molecular Weight (calculated)

45088.9 Da

IEP (calculated)

7.186

GRAVY (calculated)

-0.766

Length

415 amino acids

Sequence
(BLAST)

001: MISSPKIFNS ARTIPCLYGG CFDSFHLLLT KLVRRGIKIA LRTSPTVHDS TGTLSPPLLP PAKHLPHLAL MASEPIECQV VVLRVSIHCQ GCKKKVKKVL
101: QNINGVYRCE IDARSNKVVA TISTKLDPYM LVSKLRKSGK QAELLPEQPP PPPPPPAAES QTQEPKNNQP DEPSKPNEPA EKGGADTAEA AAAEPSNPRE
201: PKQSTGEAPN PAQDSKENAS ADETGDDTAA AAAPAPAPAQ QGPSEAKGKA KPMQQPEMQD RQPVDARVTL EYDRGVGGGH VHRMPPPAVM SYNQVRPSVS
301: ASYYAPAPSP APAPAPMPMP MPMARPGPSQ GYIDEHYTPS YYNSNYNRSP AYEPEPYYYS RPQPAPYSYQ YQYQPSSSSE DYYYSAPPQR SAFSPPRDAY
401: GEMFNDENAN SCTVM

Best Arabidopsis Sequence Match ( AT1G56210.1 )
(BLAST)

001: MATDEMKSET KKTEHKQKQS TQIKQDLPPP TIPPLPLPYK SCTLKVSIHC EGCKRKVKKI LTSIEGVFKV DIDVKQHKVT VIGIISPEIL LKKLNKAGKN
101: AEQLPEIPDP VDNKPKPVDP KEKNKKKKKE EKVQITNEAT SSGIDNPEKP GSGECDKPES EKPVDEKCLS GDGGETSGPV KEEKKDVLKE KDSGKEESPS
201: PPADSSAPAA EKKAEDTGGA VPDNGKVGKK KKKKGQSLAT TNNPTDGPAR TQSLPPPTAT DYDRPINQIN DHHITTTNNP PRHDLYPYPA QGYYAPQVMY
301: GVSYNVAQPP VSVDAASYYT PPPPYSYAYM HNGYQPSDQN PCQPRPSDSF ELFSDENPNG CAIM

Arabidopsis Description

HIPP35Heavy metal-associated isoprenylated plant protein 35 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7J6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.