Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G134100.1 | Wheat | cytosol | 96.2 | 96.2 |
| TraesCS2D01G115700.1 | Wheat | cytosol | 95.91 | 95.35 |
| Os07t0671400-01 | Rice | cytosol | 61.4 | 70.95 |
| OQU90456 | Sorghum | cytosol | 63.74 | 62.64 |
| Zm00001d022474_P001 | Maize | cytosol | 57.02 | 59.27 |
| Zm00001d007130_P001 | Maize | cytosol | 50.0 | 53.77 |
| TraesCS5A01G030900.2 | Wheat | cytosol | 40.35 | 40.95 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum | 25.73 | 36.82 |
| GSMUA_Achr5P21400_001 | Banana | cytosol | 32.46 | 36.39 |
| GSMUA_Achr11P... | Banana | cytosol | 32.16 | 34.06 |
| TraesCS1A01G232800.1 | Wheat | cytosol | 29.24 | 32.79 |
| TraesCS3A01G452100.1 | Wheat | cytosol | 31.87 | 32.63 |
| VIT_05s0020g01450.t01 | Wine grape | cytosol, endoplasmic reticulum, nucleus | 28.66 | 32.03 |
| GSMUA_Achr1P24670_001 | Banana | cytosol | 26.9 | 31.4 |
| KRH37116 | Soybean | cytosol | 24.56 | 31.23 |
| VIT_14s0060g02090.t01 | Wine grape | cytosol | 31.87 | 31.14 |
| PGSC0003DMT400063687 | Potato | cytosol | 32.16 | 29.57 |
| KRH02248 | Soybean | cytosol | 24.85 | 28.81 |
| Solyc01g099600.2.1 | Tomato | cytosol | 31.58 | 28.8 |
| CDY41724 | Canola | nucleus | 29.53 | 28.61 |
| Bra027947.1-P | Field mustard | nucleus | 29.53 | 28.61 |
| CDY53573 | Canola | nucleus | 28.95 | 28.45 |
| KRH50862 | Soybean | cytosol | 24.27 | 28.23 |
| GSMUA_Achr8P10080_001 | Banana | endoplasmic reticulum | 33.92 | 27.75 |
| KRH33893 | Soybean | cytosol | 28.95 | 26.33 |
| PGSC0003DMT400029504 | Potato | nucleus | 23.68 | 26.21 |
| Solyc01g066880.2.1 | Tomato | cytosol | 23.68 | 25.8 |
| AT1G56210.1 | Thale cress | nucleus | 27.19 | 25.55 |
| TraesCS1A01G091600.1 | Wheat | endoplasmic reticulum, plastid | 28.95 | 24.87 |
| KRH68524 | Soybean | cytosol | 25.44 | 24.72 |
| CDY05566 | Canola | nucleus | 25.15 | 24.09 |
| Bra020580.1-P | Field mustard | nucleus | 25.15 | 23.96 |
| CDY25027 | Canola | cytosol | 25.15 | 23.82 |
| AT5G27690.1 | Thale cress | nucleus | 23.68 | 23.01 |
| KRH12046 | Soybean | cytosol | 23.68 | 22.44 |
| HORVU2Hr1G019950.2 | Barley | plastid | 28.95 | 21.29 |
| TraesCS5A01G133900.1 | Wheat | cytosol | 28.66 | 18.81 |
| TraesCS3A01G048000.1 | Wheat | cytosol | 22.51 | 18.51 |
| TraesCS4A01G184700.1 | Wheat | cytosol, mitochondrion, nucleus | 26.9 | 16.28 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G114900.1 | EnsemblPlantsGene:TraesCS2A01G114900 | Gene3D:3.30.70.100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 |
| PANTHER:PTHR22814 | PANTHER:PTHR22814:SF124 | PFAM:PF00403 | PFscan:PS50846 | SEG:seg | SUPFAM:SSF55008 |
| TIGR:cd00371 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr2A:+:65652763..65654203
Molecular Weight (calculated)
36367.9 Da
IEP (calculated)
8.040
GRAVY (calculated)
-1.075
Length
342 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGEAEPLQ YTTTVLRVSI HCEGCKKKVK KVLHSIEGVY KVTIDATQHK VTVTGSVAAD ALVRRLLKSG KHAALWPVPA PAPPATEAKK PEEAPSAGKG
101: GKGAEKADAK PKKVADEAEP ESSEKPDKDE GSEKKPEKAA AKKPKDEAKE EGEDPEKKEK GSPEPPAKEA AAADEAPEAG GEETGGKKGK KKKNKQQKEV
201: GDGDAATEKP PPPPQQQQQQ PKTKQPQPQQ AMPPVPAPGP GPERAHGHGG PFPYYAPQPV MSYNMAQPSA SVSYYAPTPV ASMQPMPPPP PYGGYSPYPP
301: MMMPPPPPPE YMYGPPGMRS SPPQEPYNNM FNEENPSSCS VM
101: GKGAEKADAK PKKVADEAEP ESSEKPDKDE GSEKKPEKAA AKKPKDEAKE EGEDPEKKEK GSPEPPAKEA AAADEAPEAG GEETGGKKGK KKKNKQQKEV
201: GDGDAATEKP PPPPQQQQQQ PKTKQPQPQQ AMPPVPAPGP GPERAHGHGG PFPYYAPQPV MSYNMAQPSA SVSYYAPTPV ASMQPMPPPP PYGGYSPYPP
301: MMMPPPPPPE YMYGPPGMRS SPPQEPYNNM FNEENPSSCS VM
001: MDLGTEIKSD TRQEEQRHVF EDYPEPLRYT TWVLRVSIHC EGCKRKIKKI LSKIDGVYTT NIDVKQQKVT VIGNVEPEIL IKKIMKAGRH AELWPTSMEN
101: NINNDCNYQK KPKKDNEETS GDEDDDENNN NNNGGGDVGG GGGGGGGNFD QVKQVVTFVN GQLQPQGDGA PKKKKKKKKK KKSLGNTTVV MEGGGGGGGG
201: GGPPQNDGPP ETVIYSAPQD HHIIHGPPPH LHHHQQQNHP YPTVHSPPRH HPQQMYGPGP GLPPPSFYHT QPQTAPSYTV SYNTVHGPIN NGGNETASYY
301: TAPPSHPTSY YSYEYVDTGY ESPPPEFYSY RSQPSESFES LSEGNPNSCC VM
101: NINNDCNYQK KPKKDNEETS GDEDDDENNN NNNGGGDVGG GGGGGGGNFD QVKQVVTFVN GQLQPQGDGA PKKKKKKKKK KKSLGNTTVV MEGGGGGGGG
201: GGPPQNDGPP ETVIYSAPQD HHIIHGPPPH LHHHQQQNHP YPTVHSPPRH HPQQMYGPGP GLPPPSFYHT QPQTAPSYTV SYNTVHGPIN NGGNETASYY
301: TAPPSHPTSY YSYEYVDTGY ESPPPEFYSY RSQPSESFES LSEGNPNSCC VM
Arabidopsis Description
HIPP36Heavy metal-associated isoprenylated plant protein 36 [Source:UniProtKB/Swiss-Prot;Acc:Q84J88]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.