Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G245900.1 | Wheat | cytosol | 64.1 | 65.15 |
| TraesCS1D01G234000.1 | Wheat | cytosol | 63.46 | 64.08 |
| TraesCS1A01G232800.1 | Wheat | cytosol | 62.5 | 63.93 |
| Os05t0368600-01 | Rice | cytosol | 38.14 | 35.0 |
| HORVU3Hr1G097770.1 | Barley | cytosol | 28.85 | 26.95 |
| GSMUA_Achr11P... | Banana | cytosol | 24.68 | 23.84 |
| GSMUA_Achr5P21400_001 | Banana | cytosol | 22.12 | 22.62 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum | 17.31 | 22.59 |
| VIT_14s0060g02090.t01 | Wine grape | cytosol | 24.36 | 21.71 |
| VIT_05s0020g01450.t01 | Wine grape | cytosol, endoplasmic reticulum, nucleus | 20.83 | 21.24 |
| Solyc01g066880.2.1 | Tomato | cytosol | 21.15 | 21.02 |
| KRH37116 | Soybean | cytosol | 17.95 | 20.82 |
| PGSC0003DMT400029504 | Potato | nucleus | 20.51 | 20.71 |
| GSMUA_Achr1P24670_001 | Banana | cytosol | 18.91 | 20.14 |
| HORVU4Hr1G046610.1 | Barley | cytosol, mitochondrion, nucleus | 23.08 | 19.41 |
| HORVU1Hr1G021620.2 | Barley | plastid | 24.04 | 19.18 |
| PGSC0003DMT400063687 | Potato | cytosol | 22.76 | 19.09 |
| Solyc01g099600.2.1 | Tomato | cytosol | 22.44 | 18.67 |
| CDY41724 | Canola | nucleus | 20.83 | 18.41 |
| CDY53573 | Canola | nucleus | 20.51 | 18.39 |
| Bra027947.1-P | Field mustard | nucleus | 20.51 | 18.13 |
| KRH50862 | Soybean | cytosol | 16.99 | 18.03 |
| GSMUA_Achr8P10080_001 | Banana | endoplasmic reticulum | 23.72 | 17.7 |
| HORVU7Hr1G118340.7 | Barley | cytosol, endoplasmic reticulum, plastid | 23.4 | 17.68 |
| KRH02248 | Soybean | cytosol | 16.67 | 17.63 |
| KRH68524 | Soybean | cytosol | 19.87 | 17.61 |
| AT1G56210.1 | Thale cress | nucleus | 19.87 | 17.03 |
| Bra020580.1-P | Field mustard | nucleus | 18.91 | 16.43 |
| CDY05566 | Canola | nucleus | 18.59 | 16.25 |
| KRH33893 | Soybean | cytosol | 19.55 | 16.22 |
| AT5G27690.1 | Thale cress | nucleus | 18.27 | 16.19 |
| KRH12046 | Soybean | cytosol | 18.59 | 16.07 |
| CDY25027 | Canola | cytosol | 18.59 | 16.07 |
| HORVU2Hr1G019950.2 | Barley | plastid | 18.27 | 12.26 |
| HORVU3Hr1G004420.1 | Barley | nucleus | 15.38 | 11.21 |
| HORVU4Hr1G025770.8 | Barley | endoplasmic reticulum | 19.55 | 10.1 |
| HORVU5Hr1G040920.2 | Barley | cytosol | 14.1 | 9.28 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G058350.3 | EnsemblPlantsGene:HORVU1Hr1G058350 | Gene3D:3.30.70.100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 |
| PANTHER:PTHR22814 | PANTHER:PTHR22814:SF124 | PFAM:PF00403 | SEG:seg | SUPFAM:SSF55008 | UniParc:UPI000B4709FA |
| UniProt:A0A287FSI7 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr1H:+:426166134..426167416
Molecular Weight (calculated)
33876.8 Da
IEP (calculated)
7.816
GRAVY (calculated)
-0.655
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: SLPLFPSLTL PWFLTEQTVL MATEPLQCKT LVLRVSIHCE GCKKKVKKVL QGIDGVLSPL SSPVYLQHLH SLFTSPSILL APVKGDFLSF QRFASSEGVY
101: RCDIDARSNK VTVAVTGNVS ADALLKRLRR SGKLAQPWPE QQQQPAGGSH RPGETKNGAI QPDKPGDTGT AHKPASDDAE TNAADQSNSK ATPEEDPNKV
201: ARETAKPAQD DTESTNADAD GDDAVNHRSK EPTAEQCNGS ERKRKQLRQE EEKSVDAIAT VVVVAAAPDQ GSNTCHSPPH LQQQQPXAGA LLLRRSFQRR
301: QCQLLQRDVR EL
101: RCDIDARSNK VTVAVTGNVS ADALLKRLRR SGKLAQPWPE QQQQPAGGSH RPGETKNGAI QPDKPGDTGT AHKPASDDAE TNAADQSNSK ATPEEDPNKV
201: ARETAKPAQD DTESTNADAD GDDAVNHRSK EPTAEQCNGS ERKRKQLRQE EEKSVDAIAT VVVVAAAPDQ GSNTCHSPPH LQQQQPXAGA LLLRRSFQRR
301: QCQLLQRDVR EL
001: MDLGTEIKSD TRQEEQRHVF EDYPEPLRYT TWVLRVSIHC EGCKRKIKKI LSKIDGVYTT NIDVKQQKVT VIGNVEPEIL IKKIMKAGRH AELWPTSMEN
101: NINNDCNYQK KPKKDNEETS GDEDDDENNN NNNGGGDVGG GGGGGGGNFD QVKQVVTFVN GQLQPQGDGA PKKKKKKKKK KKSLGNTTVV MEGGGGGGGG
201: GGPPQNDGPP ETVIYSAPQD HHIIHGPPPH LHHHQQQNHP YPTVHSPPRH HPQQMYGPGP GLPPPSFYHT QPQTAPSYTV SYNTVHGPIN NGGNETASYY
301: TAPPSHPTSY YSYEYVDTGY ESPPPEFYSY RSQPSESFES LSEGNPNSCC VM
101: NINNDCNYQK KPKKDNEETS GDEDDDENNN NNNGGGDVGG GGGGGGGNFD QVKQVVTFVN GQLQPQGDGA PKKKKKKKKK KKSLGNTTVV MEGGGGGGGG
201: GGPPQNDGPP ETVIYSAPQD HHIIHGPPPH LHHHQQQNHP YPTVHSPPRH HPQQMYGPGP GLPPPSFYHT QPQTAPSYTV SYNTVHGPIN NGGNETASYY
301: TAPPSHPTSY YSYEYVDTGY ESPPPEFYSY RSQPSESFES LSEGNPNSCC VM
Arabidopsis Description
HIPP36Heavy metal-associated isoprenylated plant protein 36 [Source:UniProtKB/Swiss-Prot;Acc:Q84J88]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.