Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- endoplasmic reticulum 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G030900.2 | Wheat | cytosol | 56.42 | 69.14 |
| TraesCS5B01G030300.1 | Wheat | cytosol | 56.66 | 67.83 |
| HORVU4Hr1G046610.1 | Barley | cytosol, mitochondrion, nucleus | 57.38 | 63.88 |
| TraesCS5D01G039100.2 | Wheat | plastid | 56.9 | 61.68 |
| TraesCS7B01G462300.1 | Wheat | cytosol | 35.84 | 61.16 |
| Zm00001d047492_P001 | Maize | cytosol | 45.04 | 53.6 |
| Os03t0345700-01 | Rice | cytosol, nucleus | 31.48 | 52.0 |
| KXG39397 | Sorghum | cytosol | 46.73 | 45.31 |
| Zm00001d029126_P001 | Maize | nucleus | 43.58 | 38.96 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum | 21.55 | 37.24 |
| GSMUA_Achr5P21400_001 | Banana | cytosol | 23.73 | 32.13 |
| GSMUA_Achr11P... | Banana | cytosol | 24.94 | 31.89 |
| HORVU3Hr1G097770.1 | Barley | cytosol | 24.94 | 30.84 |
| GSMUA_Achr1P24670_001 | Banana | cytosol | 20.82 | 29.35 |
| VIT_14s0060g02090.t01 | Wine grape | cytosol | 24.21 | 28.57 |
| KRH37116 | Soybean | cytosol | 17.68 | 27.14 |
| VIT_05s0020g01450.t01 | Wine grape | cytosol, endoplasmic reticulum, nucleus | 20.1 | 27.12 |
| Solyc01g066880.2.1 | Tomato | cytosol | 20.1 | 26.43 |
| PGSC0003DMT400063687 | Potato | cytosol | 23.73 | 26.34 |
| PGSC0003DMT400029504 | Potato | nucleus | 19.61 | 26.21 |
| GSMUA_Achr8P10080_001 | Banana | endoplasmic reticulum | 25.91 | 25.6 |
| Solyc01g099600.2.1 | Tomato | cytosol | 23.0 | 25.33 |
| KRH33893 | Soybean | cytosol | 22.76 | 25.0 |
| HORVU1Hr1G021620.2 | Barley | plastid | 23.49 | 24.81 |
| KRH02248 | Soybean | cytosol | 17.68 | 24.75 |
| KRH68524 | Soybean | cytosol | 20.82 | 24.43 |
| CDY53573 | Canola | nucleus | 20.34 | 24.14 |
| CDY41724 | Canola | nucleus | 20.58 | 24.08 |
| Bra027947.1-P | Field mustard | nucleus | 20.58 | 24.08 |
| KRH50862 | Soybean | cytosol | 16.95 | 23.81 |
| AT1G56210.1 | Thale cress | nucleus | 20.82 | 23.63 |
| HORVU1Hr1G058350.3 | Barley | cytosol | 17.68 | 23.4 |
| AT5G27690.1 | Thale cress | nucleus | 18.64 | 21.88 |
| CDY05566 | Canola | nucleus | 18.64 | 21.57 |
| Bra020580.1-P | Field mustard | nucleus | 18.64 | 21.45 |
| CDY25027 | Canola | cytosol | 18.64 | 21.33 |
| KRH12046 | Soybean | cytosol | 18.4 | 21.05 |
| HORVU5Hr1G040920.2 | Barley | cytosol | 17.19 | 14.98 |
| HORVU3Hr1G004420.1 | Barley | nucleus | 15.01 | 14.49 |
| HORVU2Hr1G019950.2 | Barley | plastid | 15.98 | 14.19 |
| HORVU4Hr1G025770.8 | Barley | endoplasmic reticulum | 19.61 | 13.41 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G118340.7 | EnsemblPlantsGene:HORVU7Hr1G118340 | Gene3D:3.30.70.100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 |
| ncoils:Coil | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF124 | PFAM:PF00403 | PFscan:PS50846 | SEG:seg |
| SUPFAM:SSF55008 | UniParc:UPI000B46197C | UniProt:A0A287XYW9 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chrchr7H:+:647471878..647473982
Molecular Weight (calculated)
45108.9 Da
IEP (calculated)
5.396
GRAVY (calculated)
-0.959
Length
413 amino acids
Sequence
(BLAST)
(BLAST)
001: SALLPSHPMA SGQPAVQVHH FAPLPSIDES VALFDVRRVS WICCVQTFVL RVSIHCHGCK KKVRKVLKSI QGVHDVKVDA QQHKVLVTGT VDAETLVKTL
101: YKSGKQALPW QHTPAKNPEA PPPAEVSSND AAAAADKNPA EPVKEPQADD SSDRTPEQEE TAPDKTPETE KEAESEKKED EKEEAKATKP SAEAKKDGGD
201: GEGPAAEPKA KEDTKVAGND QGEAKEEQSK PKDAAAADRS LSPAPTPAHQ EFSPYNAPQP VTSYHTAHPA ASVSYYAPQP EQGYSMRQQP SQPQPGYSSL
301: MQPQHPPPAP QQQWSPSYLY MPYPHASLES YYPDYYSPPG THTPPAPPPP PPQQQWSPSY LYMPYPHASL ESYYPDYYSP PGTHTPPAPP PPPPLQDSYR
401: LFDDENPNSC SVM
101: YKSGKQALPW QHTPAKNPEA PPPAEVSSND AAAAADKNPA EPVKEPQADD SSDRTPEQEE TAPDKTPETE KEAESEKKED EKEEAKATKP SAEAKKDGGD
201: GEGPAAEPKA KEDTKVAGND QGEAKEEQSK PKDAAAADRS LSPAPTPAHQ EFSPYNAPQP VTSYHTAHPA ASVSYYAPQP EQGYSMRQQP SQPQPGYSSL
301: MQPQHPPPAP QQQWSPSYLY MPYPHASLES YYPDYYSPPG THTPPAPPPP PPQQQWSPSY LYMPYPHASL ESYYPDYYSP PGTHTPPAPP PPPPLQDSYR
401: LFDDENPNSC SVM
001: MTKDEDFKLL KIQTFSLRVN IHCEGCNKKV KKLLQRIEGV CHVKIEAEHQ KVTVSGSVDS ATLINKLVKA GKHAELWSPN PNQNQPQKPK TNDFIKNVNQ
101: KGQKQGSAKS GIEACKPKNG PKGAAFVAEE DGDGSEEEDG DVQFPKPANQ QQQQNVVNAK KNSGGAAMNN GNNGVNAASK KVNQKQSNHN QNTQQVMAAM
201: RMRTAGKMST GVEANEIGAL MGLAGFNGAT NAVNHPPNGI QQQLQAPPLN NVNGVTNHNL TNSNGGMMMN MNGYNNHHPM NMQSRQMMHQ PQQMMYQRSS
301: FVPASSNGYY YNYTPSPYSY YPYYPYASDQ YQQQSSHSHA TNMSSEEDAG NNNSCNIM
101: KGQKQGSAKS GIEACKPKNG PKGAAFVAEE DGDGSEEEDG DVQFPKPANQ QQQQNVVNAK KNSGGAAMNN GNNGVNAASK KVNQKQSNHN QNTQQVMAAM
201: RMRTAGKMST GVEANEIGAL MGLAGFNGAT NAVNHPPNGI QQQLQAPPLN NVNGVTNHNL TNSNGGMMMN MNGYNNHHPM NMQSRQMMHQ PQQMMYQRSS
301: FVPASSNGYY YNYTPSPYSY YPYYPYASDQ YQQQSSHSHA TNMSSEEDAG NNNSCNIM
Arabidopsis Description
Heavy metal transport/detoxification superfamily protein [Source:TAIR;Acc:AT1G23000]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.