Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 1
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G245900.1 | Wheat | cytosol | 51.76 | 57.33 |
| TraesCS1D01G234000.1 | Wheat | cytosol | 52.06 | 57.28 |
| TraesCS1A01G232800.1 | Wheat | cytosol | 50.59 | 56.39 |
| Os01t0933200-00 | Rice | cytosol | 45.88 | 46.43 |
| HORVU1Hr1G058350.3 | Barley | cytosol | 35.0 | 38.14 |
| GSMUA_Achr5P21400_001 | Banana | cytosol | 28.53 | 31.8 |
| Os07t0671400-01 | Rice | cytosol | 26.76 | 30.74 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum | 21.18 | 30.13 |
| GSMUA_Achr11P... | Banana | cytosol | 27.35 | 28.79 |
| VIT_14s0060g02090.t01 | Wine grape | cytosol | 27.94 | 27.14 |
| KRH37116 | Soybean | cytosol | 21.47 | 27.14 |
| GSMUA_Achr1P24670_001 | Banana | cytosol | 23.24 | 26.96 |
| KRH02248 | Soybean | cytosol | 21.76 | 25.08 |
| VIT_05s0020g01450.t01 | Wine grape | cytosol, endoplasmic reticulum, nucleus | 22.35 | 24.84 |
| KRH50862 | Soybean | cytosol | 21.47 | 24.83 |
| KRH68524 | Soybean | cytosol | 25.29 | 24.43 |
| Solyc01g066880.2.1 | Tomato | cytosol | 21.47 | 23.25 |
| Os03t0345700-01 | Rice | cytosol, nucleus | 17.06 | 23.2 |
| PGSC0003DMT400029504 | Potato | nucleus | 20.88 | 22.98 |
| Solyc01g099600.2.1 | Tomato | cytosol | 25.29 | 22.93 |
| PGSC0003DMT400063687 | Potato | cytosol | 25.0 | 22.85 |
| CDY53573 | Canola | nucleus | 23.24 | 22.7 |
| Bra027947.1-P | Field mustard | nucleus | 23.53 | 22.66 |
| CDY41724 | Canola | nucleus | 23.53 | 22.66 |
| GSMUA_Achr8P10080_001 | Banana | endoplasmic reticulum | 27.35 | 22.25 |
| KRH33893 | Soybean | cytosol | 24.12 | 21.81 |
| AT1G56210.1 | Thale cress | nucleus | 22.94 | 21.43 |
| Bra020580.1-P | Field mustard | nucleus | 22.06 | 20.89 |
| CDY05566 | Canola | nucleus | 21.47 | 20.45 |
| CDY25027 | Canola | cytosol | 21.47 | 20.22 |
| AT5G27690.1 | Thale cress | nucleus | 20.88 | 20.17 |
| KRH12046 | Soybean | cytosol | 21.18 | 19.94 |
| Os01t0125600-01 | Rice | cytosol | 22.35 | 18.1 |
| Os05t0150733-00 | Rice | cytosol, nucleus, plastid | 9.71 | 16.92 |
| Os11t0147500-01 | Rice | cytosol | 23.53 | 15.53 |
| Os12t0144600-01 | Rice | cytosol | 22.65 | 14.69 |
Protein Annotations
| Gene3D:3.30.70.100 | MapMan:35.2 | EntrezGene:4338573 | ProteinID:AAT38022.1 | EMBL:AK058953 | ProteinID:BAF17257.1 |
| ProteinID:BAS93663.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 | GO:GO:0030001 |
| GO:GO:0046872 | GO:GO:0046914 | GO:GO:0046916 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 |
| EnsemblPlantsGene:Os05g0368600 | EnsemblPlants:Os05t0368600-01 | PFAM:PF00403 | PFscan:PS50846 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF124 |
| UniProt:Q6L585 | SUPFAM:SSF55008 | UniParc:UPI0000376BDA | RefSeq:XP_015638953.1 | SEG:seg | : |
Description
Heavy metal transport/detoxification protein domain containing protein. (Os05t0368600-01)
Coordinates
chr5:-:17714478..17715988
Molecular Weight (calculated)
35759.1 Da
IEP (calculated)
7.845
GRAVY (calculated)
-0.908
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MASESLQCKV LALRVSIHCE GCKKKVKKVL QRVEGVYRCD VDGRSNKATV TVTGKVSADT LVRKLRRAGK HAEQWPEEQQ QQQPNGGQCQ EETKNQAAEP
101: GMSGEPAEPE KPASGDAAEP SDPKVTHEEP KKVAGEGAAA VAPAEDGGTE ITDANVSESA GDGGGGGGGV ETVKAQQPSE PKRRRKQQPP QQQKEEKAGE
201: ATMATAAAAA ASTQGNHTSH HFPAAPLQQQ PVHVMSYNVA RPSSSAAYYA AARPASAARP PPPLPPAPPQ EHSYAYSPYY SQSQPSPYRY GGYYSYYYYG
301: GGGGGGGGGQ RTPQRSAASP ARNSYGDLFS DDNANSCSVM
101: GMSGEPAEPE KPASGDAAEP SDPKVTHEEP KKVAGEGAAA VAPAEDGGTE ITDANVSESA GDGGGGGGGV ETVKAQQPSE PKRRRKQQPP QQQKEEKAGE
201: ATMATAAAAA ASTQGNHTSH HFPAAPLQQQ PVHVMSYNVA RPSSSAAYYA AARPASAARP PPPLPPAPPQ EHSYAYSPYY SQSQPSPYRY GGYYSYYYYG
301: GGGGGGGGGQ RTPQRSAASP ARNSYGDLFS DDNANSCSVM
001: MTKDEDFKLL KIQTFSLRVN IHCEGCNKKV KKLLQRIEGV CHVKIEAEHQ KVTVSGSVDS ATLINKLVKA GKHAELWSPN PNQNQPQKPK TNDFIKNVNQ
101: KGQKQGSAKS GIEACKPKNG PKGAAFVAEE DGDGSEEEDG DVQFPKPANQ QQQQNVVNAK KNSGGAAMNN GNNGVNAASK KVNQKQSNHN QNTQQVMAAM
201: RMRTAGKMST GVEANEIGAL MGLAGFNGAT NAVNHPPNGI QQQLQAPPLN NVNGVTNHNL TNSNGGMMMN MNGYNNHHPM NMQSRQMMHQ PQQMMYQRSS
301: FVPASSNGYY YNYTPSPYSY YPYYPYASDQ YQQQSSHSHA TNMSSEEDAG NNNSCNIM
101: KGQKQGSAKS GIEACKPKNG PKGAAFVAEE DGDGSEEEDG DVQFPKPANQ QQQQNVVNAK KNSGGAAMNN GNNGVNAASK KVNQKQSNHN QNTQQVMAAM
201: RMRTAGKMST GVEANEIGAL MGLAGFNGAT NAVNHPPNGI QQQLQAPPLN NVNGVTNHNL TNSNGGMMMN MNGYNNHHPM NMQSRQMMHQ PQQMMYQRSS
301: FVPASSNGYY YNYTPSPYSY YPYYPYASDQ YQQQSSHSHA TNMSSEEDAG NNNSCNIM
Arabidopsis Description
Heavy metal transport/detoxification superfamily protein [Source:TAIR;Acc:AT1G23000]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.