Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G245900.1 | Wheat | cytosol | 90.94 | 91.53 |
| TraesCS1A01G232800.1 | Wheat | cytosol | 88.67 | 89.84 |
| HORVU1Hr1G058350.3 | Barley | cytosol | 64.08 | 63.46 |
| Os05t0368600-01 | Rice | cytosol | 57.28 | 52.06 |
| TraesCS3D01G444600.1 | Wheat | cytosol | 40.78 | 38.53 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum | 23.62 | 30.54 |
| GSMUA_Achr5P21400_001 | Banana | cytosol | 30.1 | 30.49 |
| TraesCS2D01G115700.1 | Wheat | cytosol | 32.04 | 28.78 |
| GSMUA_Achr11P... | Banana | cytosol | 29.13 | 27.86 |
| VIT_14s0060g02090.t01 | Wine grape | cytosol | 30.42 | 26.86 |
| KRH37116 | Soybean | cytosol | 23.3 | 26.77 |
| GSMUA_Achr1P24670_001 | Banana | cytosol | 25.24 | 26.62 |
| VIT_05s0020g01450.t01 | Wine grape | cytosol, endoplasmic reticulum, nucleus | 25.57 | 25.82 |
| Solyc01g099600.2.1 | Tomato | cytosol | 31.07 | 25.6 |
| PGSC0003DMT400063687 | Potato | cytosol | 30.74 | 25.54 |
| TraesCS5D01G039100.2 | Wheat | plastid | 31.07 | 25.2 |
| PGSC0003DMT400029504 | Potato | nucleus | 24.92 | 24.92 |
| Solyc01g066880.2.1 | Tomato | cytosol | 25.24 | 24.84 |
| CDY41724 | Canola | nucleus | 28.16 | 24.65 |
| CDY53573 | Canola | nucleus | 27.51 | 24.43 |
| Bra027947.1-P | Field mustard | nucleus | 27.83 | 24.36 |
| KRH68524 | Soybean | cytosol | 27.18 | 23.86 |
| KRH33893 | Soybean | cytosol | 28.16 | 23.14 |
| AT1G56210.1 | Thale cress | nucleus | 26.21 | 22.25 |
| KRH02248 | Soybean | cytosol | 21.04 | 22.03 |
| GSMUA_Achr8P10080_001 | Banana | endoplasmic reticulum | 29.77 | 22.01 |
| KRH50862 | Soybean | cytosol | 20.71 | 21.77 |
| AT5G27690.1 | Thale cress | nucleus | 24.6 | 21.59 |
| Bra020580.1-P | Field mustard | nucleus | 24.92 | 21.45 |
| CDY05566 | Canola | nucleus | 24.6 | 21.29 |
| CDY25027 | Canola | cytosol | 24.6 | 21.05 |
| TraesCS1D01G100200.1 | Wheat | plastid, vacuole | 27.51 | 20.78 |
| KRH12046 | Soybean | cytosol | 22.65 | 19.39 |
| TraesCS3D01G031400.1 | Wheat | cytosol | 22.01 | 16.46 |
| TraesCS5D01G141600.1 | Wheat | cytosol | 25.57 | 15.08 |
| TraesCS4D01G128900.1 | Wheat | cytosol, mitochondrion, nucleus | 24.6 | 12.88 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G234000.1 | EnsemblPlantsGene:TraesCS1D01G234000 | Gene3D:3.30.70.100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 |
| PANTHER:PTHR22814 | PANTHER:PTHR22814:SF124 | PFAM:PF00403 | PFscan:PS50846 | SEG:seg | SUPFAM:SSF55008 |
| TIGR:cd00371 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr1D:-:322278360..322279826
Molecular Weight (calculated)
33102.3 Da
IEP (calculated)
8.215
GRAVY (calculated)
-0.841
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MATEPLQCKT LVLRVSIHCE GCKKKVKKVL QGVDGVYRCD IDARSNKVTV AVTGNVSADA LLKRLRRSGK NAQLWPEQQQ QQQQQLAVGT QRHGETKNDA
101: IQPDKPGGTG TAHKPASGDE GTNAADKSNS KATHEEDPNK VVRETAKPAQ DDPASTNADA DGNDAVSHRS KEPTAEQSNG PERKRKQLRQ EEKPVDAIAT
201: VVAAAASDQG SHTCHSPPHL QQQQPPPVHV LSYSMARPSA SAAYYAAAPA TAAPGARSLP PQELPYTYPP CCHYSQPSPW APQTGAASPA RYSYADLFSD
301: DNANSCRVM
101: IQPDKPGGTG TAHKPASGDE GTNAADKSNS KATHEEDPNK VVRETAKPAQ DDPASTNADA DGNDAVSHRS KEPTAEQSNG PERKRKQLRQ EEKPVDAIAT
201: VVAAAASDQG SHTCHSPPHL QQQQPPPVHV LSYSMARPSA SAAYYAAAPA TAAPGARSLP PQELPYTYPP CCHYSQPSPW APQTGAASPA RYSYADLFSD
301: DNANSCRVM
001: MDLGTEIKSD TRQEEQRHVF EDYPEPLRYT TWVLRVSIHC EGCKRKIKKI LSKIDGVYTT NIDVKQQKVT VIGNVEPEIL IKKIMKAGRH AELWPTSMEN
101: NINNDCNYQK KPKKDNEETS GDEDDDENNN NNNGGGDVGG GGGGGGGNFD QVKQVVTFVN GQLQPQGDGA PKKKKKKKKK KKSLGNTTVV MEGGGGGGGG
201: GGPPQNDGPP ETVIYSAPQD HHIIHGPPPH LHHHQQQNHP YPTVHSPPRH HPQQMYGPGP GLPPPSFYHT QPQTAPSYTV SYNTVHGPIN NGGNETASYY
301: TAPPSHPTSY YSYEYVDTGY ESPPPEFYSY RSQPSESFES LSEGNPNSCC VM
101: NINNDCNYQK KPKKDNEETS GDEDDDENNN NNNGGGDVGG GGGGGGGNFD QVKQVVTFVN GQLQPQGDGA PKKKKKKKKK KKSLGNTTVV MEGGGGGGGG
201: GGPPQNDGPP ETVIYSAPQD HHIIHGPPPH LHHHQQQNHP YPTVHSPPRH HPQQMYGPGP GLPPPSFYHT QPQTAPSYTV SYNTVHGPIN NGGNETASYY
301: TAPPSHPTSY YSYEYVDTGY ESPPPEFYSY RSQPSESFES LSEGNPNSCC VM
Arabidopsis Description
HIPP36Heavy metal-associated isoprenylated plant protein 36 [Source:UniProtKB/Swiss-Prot;Acc:Q84J88]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.