Factsheet for VIT_14s0006g01780.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
mitochondrion 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	extracellular
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01696	Canola	cytosol	26.9	22.08
CDX74552	Canola	cytosol	25.89	21.61
Bra028156.1-P	Field mustard	cytosol	26.4	21.58
VIT_07s0005g00050.t01	Wine grape	cytosol	27.41	20.15
GSMUA_Achr1P23080_001	Banana	cytosol	30.46	18.69
Solyc02g091310.1.1	Tomato	cytosol	32.99	18.26
VIT_01s0011g04710.t01	Wine grape	cytosol	35.53	17.95
PGSC0003DMT400078636	Potato	cytosol	31.98	17.7
VIT_05s0020g01450.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	27.41	17.65
AT5G37860.1	Thale cress	nucleus	23.35	17.56
GSMUA_Achr8P31620_001	Banana	cytosol	32.99	17.15
GSMUA_Achr2P22760_001	Banana	cytosol	30.46	17.09
GSMUA_Achr7P12020_001	Banana	cytosol	29.95	16.86
GSMUA_Achr3P01290_001	Banana	cytosol	31.47	16.71
GSMUA_Achr10P...	Banana	cytosol	28.43	16.09
GSMUA_Achr9P19310_001	Banana	cytosol	31.47	15.94
TraesCS3D01G031400.1	Wheat	cytosol	32.49	15.5
Os01t0125600-01	Rice	cytosol	32.99	15.48
VIT_14s0060g02090.t01	Wine grape	cytosol	27.41	15.43
TraesCS3A01G048000.1	Wheat	cytosol	31.47	14.9
TraesCS3B01G034100.1	Wheat	cytosol	31.47	14.76
EES02570	Sorghum	cytosol	32.49	14.32
VIT_05s0020g02690.t01	Wine grape	cytosol	34.01	13.65
Zm00001d008515_P001	Maize	cytosol	31.98	13.61
Zm00001d040040_P001	Maize	cytosol	30.96	13.2
VIT_14s0128g00190.t01	Wine grape	cytosol	31.98	12.4
HORVU3Hr1G004420.1	Barley	nucleus	24.37	11.21

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.1	ProteinID:CBI33558	ProteinID:CBI33558.3	UniProt:D7TST6	EMBL:FN596245
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006810	GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0030001	GO:GO:0046872
GO:GO:0046914	GO:GO:0046916	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121	PFAM:PF00403
PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF150	SUPFAM:SSF55008	UniParc:UPI00015C95EA	ArrayExpress:VIT_14s0006g01780
EnsemblPlantsGene:VIT_14s0006g01780	EnsemblPlants:VIT_14s0006g01780.t01	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr14:-:18297665..18298470

Molecular Weight (calculated)

22115.1 Da

IEP (calculated)

6.597

GRAVY (calculated)

-0.534

Length

197 amino acids

Sequence
(BLAST)

001: MLLFLAQTCV LKVHVNCNGC KQKVKKLLSR IEGVYSVSID AEQQKVTVTG NVDAATLINK LVRRGKHAEL WPPSNHQNQN QQHSNFMKDD DHSIHPMHYR
101: INDNQHMLPS FYAMEDQDRW ARGMYLNQSM GSKAMAGYTD HNMATPTMEG YAYMGGDADN TLMGLENFQV NAAGFVGLGG YGWSEFQDFS AGFPSNE

Best Arabidopsis Sequence Match ( AT5G19090.1 )
(BLAST)

001: MSKEEFMKIQ TCVLKVNIHC DGCKQKVKKI LQKIEGVFTT KIDAELGKVT VSGNVDPSVL IKKLLKSGKH AEIWGAPKGG SNNNQNQPNL ANQFKAMQID
101: HGGKGGGGGG GGPANNNKGQ KIGGGGGGGG GGGGGGGGGP PKMVIPQLTP QQMQQLNPQQ LQQLQQLQQM KGFQDLKLPP QLKGGPGPGP GSVPMNKNPQ
201: MPNNPNQKAV KFNVPDDDDE EDFSDEFDDE FDEDDDEFDD DLEDDEFDDH PPPPNKMKPM MGGGNMIMPN NMMPNMMMPN AQQMLNAHKN GGGPGPAGGK
301: IEGKGMPFPV QMGGGGGGPG GKKGGPGGGG GNMGNQNQGG GGKNGGKGGG GHPLDGKMGG GGGGPNGNKG GGGVQMNGGP NGGKKGGGGG GGGGGGPMSG
401: GLPPGFRPMG GGGGGGGGPQ SMSMPMGGAM GGPMGSLPQM GGGPGPMSNN MQAVQGLPAM GPGGGGGGGP SAEAPPGYFQ GQVSGNGGGG QDSMPGNPYL
501: QQQQQQQQQQ YLAAVMNQQR SMGNERFQPM MYARPPPAVN YMPPQPQPHQ QHPYPYPYPY PPQYPPHNGD QYSDYFNDEN TSSCNIM

Arabidopsis Description

HIPP33Heavy metal-associated isoprenylated plant protein 33 [Source:UniProtKB/Swiss-Prot;Acc:F4JZL7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.