Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX84893 | Canola | plastid | 83.12 | 81.53 |
| Bra022748.1-P | Field mustard | plastid | 83.12 | 81.53 |
| CDY45796 | Canola | plastid | 78.57 | 74.69 |
| KRH59722 | Soybean | nucleus | 61.04 | 61.04 |
| KRH41049 | Soybean | nucleus, plastid | 61.04 | 59.87 |
| Zm00001d007394_P001 | Maize | plastid | 55.84 | 58.5 |
| Solyc03g118130.2.1 | Tomato | plastid | 58.44 | 56.96 |
| VIT_17s0000g00110.t01 | Wine grape | plastid | 59.74 | 56.79 |
| EES09846 | Sorghum | plastid | 55.19 | 56.29 |
| PGSC0003DMT400036930 | Potato | plastid | 57.79 | 55.62 |
| TraesCS4B01G100700.1 | Wheat | plastid | 55.19 | 55.56 |
| Os11t0528500-01 | Rice | plastid | 53.9 | 54.97 |
| TraesCS4D01G097300.1 | Wheat | plastid | 54.55 | 54.9 |
| GSMUA_Achr10P... | Banana | plastid | 59.74 | 54.44 |
| TraesCS4A01G215500.1 | Wheat | plastid | 53.25 | 52.9 |
| KRH63883 | Soybean | plastid | 55.84 | 52.12 |
| KRH54078 | Soybean | plastid | 40.26 | 43.06 |
| HORVU4Hr1G043650.2 | Barley | plastid | 53.9 | 32.94 |
| GSMUA_Achr6P16380_001 | Banana | vacuole | 31.17 | 27.27 |
Protein Annotations
| Gene3D:2.20.28.10 | MapMan:35.2 | EntrezGene:835174 | UniProt:A0A178UGM8 | ProteinID:AED96021.1 | ArrayExpress:AT5G51010 |
| EnsemblPlantsGene:AT5G51010 | RefSeq:AT5G51010 | TAIR:AT5G51010 | RefSeq:AT5G51010-TAIR-G | EnsemblPlants:AT5G51010.1 | TAIR:AT5G51010.1 |
| EMBL:AY050768 | EMBL:AY079348 | EMBL:AY086803 | Unigene:At.49159 | ProteinID:BAB08747.1 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005506 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR024934 |
| RefSeq:NP_568749.1 | ProteinID:OAO91821.1 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50903 | PANTHER:PTHR45299 | UniProt:Q9FI47 | InterPro:Rubredoxin-like_dom |
| InterPro:Rubredoxin_dom | SUPFAM:SSF57802 | TMHMM:TMhelix | UniParc:UPI000009E774 | SEG:seg | : |
Description
Rubredoxin-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FI47]
Coordinates
chr5:+:20744553..20745703
Molecular Weight (calculated)
17231.0 Da
IEP (calculated)
10.322
GRAVY (calculated)
-0.284
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMQLPPTTL YAGRSSVVLP PTTPTLQRSS FLPYYSMRLL GNKKSLSKSS APRFSMRVSS KQAYICRDCG YIYNDRTPFD KLPDNYFCPV CAAPKRRFRA
101: YMPDVSKNVN DKDVRKARKA ELQRDEAVGK ALPIGIAVGV LALAALYFYV NSTS
101: YMPDVSKNVN DKDVRKARKA ELQRDEAVGK ALPIGIAVGV LALAALYFYV NSTS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.