Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- endoplasmic reticulum 1
- mitochondrion 2
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra027174.1-P | |
| Bra030034.1-P | |
| Bra032817.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G14455.1 | Bra030034.1-P | AT1G27300.1 | 21798944 |
| AT4G14455.1 | Bra032817.1-P | AT1G27300.1 | 21798944 |
| AT4G14455.1 | Bra027174.1-P | AT3G16310.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47151 | Canola | cytosol | 100.0 | 100.0 |
| AT4G14455.1 | Thale cress | cytosol, mitochondrion | 91.67 | 93.08 |
| CDY12469 | Canola | plastid | 100.0 | 72.13 |
| KRG90380 | Soybean | cytosol | 68.18 | 67.67 |
| KRH31727 | Soybean | cytosol | 68.18 | 67.67 |
| PGSC0003DMT400044453 | Potato | cytosol | 65.91 | 65.41 |
| GSMUA_Achr2P04090_001 | Banana | cytosol | 59.09 | 63.93 |
| Os02t0820700-02 | Rice | cytosol | 56.82 | 61.48 |
| Solyc09g089630.2.1 | Tomato | cytosol | 66.67 | 60.69 |
| Zm00001d018507_P002 | Maize | mitochondrion | 55.3 | 60.33 |
| TraesCS6D01G383300.1 | Wheat | cytosol | 53.79 | 58.68 |
| TraesCS6B01G439400.1 | Wheat | cytosol | 53.79 | 58.68 |
| TraesCS6A01G399100.1 | Wheat | cytosol | 53.03 | 57.85 |
| Bra007383.1-P | Field mustard | cytosol | 57.58 | 57.58 |
| Zm00001d031883_P001 | Maize | cytosol | 52.27 | 56.56 |
| EES14052 | Sorghum | cytosol | 51.52 | 55.74 |
| KXG31387 | Sorghum | cytosol | 55.3 | 55.73 |
| Os08t0563300-01 | Rice | cytosol | 50.0 | 54.55 |
| GSMUA_Achr11P... | Banana | cytosol | 49.24 | 53.72 |
| Bra003325.1-P | Field mustard | cytosol | 45.45 | 51.28 |
| HORVU6Hr1G091720.2 | Barley | cytosol, plastid | 43.18 | 39.31 |
| GSMUA_Achr5P19560_001 | Banana | endoplasmic reticulum, extracellular | 28.79 | 35.19 |
| GSMUA_AchrUn_... | Banana | cytosol, endoplasmic reticulum, plastid | 58.33 | 31.3 |
Protein Annotations
| EnsemblPlants:Bra039859.1 | EnsemblPlants:Bra039859.1-P | EnsemblPlantsGene:Bra039859 | Gene3D:1.20.5.110 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:IPR000727 | InterPro:T_SNARE_dom | PANTHER:PTHR12791 | PANTHER:PTHR12791:SF36 | PFscan:PS50192 |
| SEG:seg | SUPFAM:SSF58038 | TMHMM:TMhelix | UniParc:UPI0002545831 | UniProt:M4FFI5 | MapMan:22.7.4.4 |
Description
AT4G14455 (E=4e-057) ATBET12, BET12, ATBS14B, BS14B | ATBET12; SNAP receptor/ protein transporter
Coordinates
chrA08:+:6246086..6247192
Molecular Weight (calculated)
15392.5 Da
IEP (calculated)
9.642
GRAVY (calculated)
-0.589
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MNYRRENRAS RTSLFDGLDG LEEGRLRASS SYSHDTTERD NDEALESLQD RVSFLKRVTG DIHEEVESHN RMLDKVGNKM DSARGIMSGT INRFKLVFEK
101: KSNRKTCKLI GYFVLLFLVM YYLIRLLNYI KG
101: KSNRKTCKLI GYFVLLFLVM YYLIRLLNYI KG
001: MNFRRENRAS RTSLFDGLDG LEEGRLRASS SYAHDERDND EALENLQDRV SFLKRVTGDI HEEVENHNRL LDKVGNKMDS ARGIMSGTIN RFKLVFEKKS
101: NRKSCKLIAY FVLLFLIMYY LIRLLNYIKG
101: NRKSCKLIAY FVLLFLIMYY LIRLLNYIKG
Arabidopsis Description
BET12At4g14455 [Source:UniProtKB/TrEMBL;Acc:Q147J7]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.