Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
21723739
|
plastid:
22160430
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G077700.1 | Wheat | plasma membrane | 99.3 | 99.3 |
| TraesCS2A01G065700.1 | Wheat | golgi | 99.3 | 99.3 |
| Os04t0233400-01 | Rice | plasma membrane | 88.03 | 88.65 |
| GSMUA_Achr5P11480_001 | Banana | plasma membrane | 60.21 | 86.36 |
| GSMUA_Achr1P02360_001 | Banana | unclear | 84.15 | 84.75 |
| GSMUA_Achr2P11190_001 | Banana | plasma membrane | 83.45 | 84.34 |
| AT2G16850.1 | Thale cress | plasma membrane | 80.99 | 82.73 |
| VIT_03s0038g02520.t01 | Wine grape | plasma membrane | 80.28 | 81.72 |
| Bra011585.1-P | Field mustard | plasma membrane | 80.28 | 81.14 |
| CDY52648 | Canola | plasma membrane | 80.28 | 81.14 |
| Bra017697.1-P | Field mustard | cytosol | 79.93 | 80.78 |
| CDX69112 | Canola | plasma membrane | 79.93 | 80.78 |
| CDX76314 | Canola | cytosol | 79.93 | 80.78 |
| CDY17511 | Canola | plasma membrane | 79.58 | 80.43 |
| AT4G35100.1 | Thale cress | plasma membrane | 79.23 | 80.36 |
| Bra034675.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 79.23 | 80.07 |
| KRH60692 | Soybean | mitochondrion | 77.46 | 80.0 |
| KRH51390 | Soybean | plasma membrane | 77.46 | 79.14 |
| CDX72515 | Canola | golgi, plasma membrane | 70.77 | 79.13 |
| HORVU2Hr1G010990.2 | Barley | plasma membrane | 88.03 | 78.62 |
| PGSC0003DMT400009240 | Potato | cytosol, extracellular, plasma membrane | 69.37 | 78.49 |
| Solyc01g111660.2.1 | Tomato | nucleus | 78.17 | 78.45 |
| PGSC0003DMT400015824 | Potato | plasma membrane | 78.17 | 78.45 |
| Solyc02g083510.2.1 | Tomato | nucleus | 70.77 | 77.61 |
| Solyc10g055630.1.1 | Tomato | nucleus, plastid | 76.06 | 76.33 |
| PGSC0003DMT400068708 | Potato | plasma membrane | 75.35 | 75.62 |
| TraesCS2D01G206300.1 | Wheat | golgi | 76.41 | 74.83 |
| TraesCS2D01G376100.1 | Wheat | plasma membrane | 76.06 | 74.48 |
| TraesCS2D01G376000.1 | Wheat | golgi | 76.06 | 74.48 |
| KRH16406 | Soybean | extracellular | 39.79 | 73.86 |
| TraesCS6D01G212900.1 | Wheat | golgi, plasma membrane | 73.94 | 73.43 |
| TraesCS5D01G112500.1 | Wheat | plasma membrane | 72.54 | 72.03 |
| TraesCS5D01G561700.1 | Wheat | golgi, peroxisome, plasma membrane | 69.37 | 69.37 |
| TraesCS6D01G389400.1 | Wheat | plasma membrane | 69.72 | 67.81 |
| TraesCS6D01G389500.1 | Wheat | plasma membrane | 69.37 | 67.47 |
| TraesCS6D01G227500.1 | Wheat | golgi | 68.31 | 66.9 |
| TraesCS5D01G185400.1 | Wheat | plasma membrane | 68.66 | 66.78 |
| TraesCS5D01G338200.1 | Wheat | plasma membrane | 68.31 | 66.67 |
| TraesCS4D01G355600.1 | Wheat | golgi, peroxisome, plasma membrane | 68.31 | 66.44 |
| TraesCS5D01G560400.1 | Wheat | golgi, peroxisome, plasma membrane | 67.25 | 65.64 |
| TraesCS5D01G548900.1 | Wheat | golgi, peroxisome, plasma membrane | 65.85 | 64.71 |
| TraesCS6D01G076400.1 | Wheat | golgi, peroxisome, plasma membrane | 63.38 | 61.02 |
| TraesCS7D01G192200.1 | Wheat | golgi, peroxisome, plasma membrane | 62.32 | 58.22 |
| TraesCS2D01G404800.2 | Wheat | golgi, peroxisome, plasma membrane | 63.03 | 57.01 |
| TraesCS2D01G411400.1 | Wheat | plasma membrane | 32.39 | 37.1 |
| TraesCS6D01G232100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 32.04 | 36.55 |
| TraesCS3D01G540900.1 | Wheat | plasma membrane | 32.39 | 36.51 |
| TraesCS3D01G163400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 28.87 | 33.33 |
| TraesCS7D01G339600.1 | Wheat | plasma membrane | 32.39 | 32.97 |
| TraesCS4D01G308800.1 | Wheat | golgi, plasma membrane, vacuole | 28.87 | 31.91 |
| TraesCS2D01G370800.1 | Wheat | plasma membrane | 29.23 | 31.32 |
| TraesCS1D01G175200.1 | Wheat | unclear | 27.82 | 30.04 |
| TraesCS2D01G411500.1 | Wheat | endoplasmic reticulum | 26.76 | 29.01 |
| TraesCS4D01G344300.1 | Wheat | plasma membrane | 25.35 | 28.24 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.2 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0055085 |
| InterPro:IPR023271 | InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 |
| PANTHER:PTHR19139 | PANTHER:PTHR19139:SF196 | SUPFAM:SSF81338 | TIGRFAMs:TIGR00861 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS2D01G063900 |
| EnsemblPlants:TraesCS2D01G063900.1 | TIGR:cd00333 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2D:-:27482527..27483488
Molecular Weight (calculated)
29867.6 Da
IEP (calculated)
9.447
GRAVY (calculated)
0.546
Length
284 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKEVSEEPE HAAPAHKDYS DPPPAPLFDM GELRMWSFYR AIIAEFVATL LFLYITVATV IGYKVQSAAD PCGGVGVLGI AWAFGGMIFV LVYCTAGISG
101: GHINPAVTFG LLLARKVSLL RAVMYIVAQC AGGIVGAGIV KGIMKDAYQA NGGGANMVAS GFSRGTALGA EIVGTFVLVY TVFSATDPKR SARDSHVPVL
201: APLPIGFAVF MVHLATIPIT GTGINPARSL GAAVIYNKKA AWDNHWIFWV GPFVGALAAA AYHQYILRAA AIKALGSFRS SRSN
101: GHINPAVTFG LLLARKVSLL RAVMYIVAQC AGGIVGAGIV KGIMKDAYQA NGGGANMVAS GFSRGTALGA EIVGTFVLVY TVFSATDPKR SARDSHVPVL
201: APLPIGFAVF MVHLATIPIT GTGINPARSL GAAVIYNKKA AWDNHWIFWV GPFVGALAAA AYHQYILRAA AIKALGSFRS SRSN
001: MSKEVSEEGR HGKDYVDPPP APLLDMAELK LWSFYRAIIA EFIATLLFLY VTVATVIGHK NQTGPCGGVG LLGIAWAFGG MIFVLVYCTA GISGGHINPA
101: VTFGLFLARK VSLPRAVAYM VAQCLGAICG VGLVKAFMMT PYKRLGGGAN TVADGYSTGT ALGAEIIGTF VLVYTVFSAT DPKRSARDSH VPVLAPLPIG
201: FAVFMVHLAT IPITGTGINP ARSFGAAVIY NNEKAWDDHW IFWVGPFVGA LAAAAYHQYI LRAAAIKALA SFRSNPTN
101: VTFGLFLARK VSLPRAVAYM VAQCLGAICG VGLVKAFMMT PYKRLGGGAN TVADGYSTGT ALGAEIIGTF VLVYTVFSAT DPKRSARDSH VPVLAPLPIG
201: FAVFMVHLAT IPITGTGINP ARSFGAAVIY NNEKAWDDHW IFWVGPFVGA LAAAAYHQYI LRAAAIKALA SFRSNPTN
Arabidopsis Description
PIP2-8Probable aquaporin PIP2-8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVX8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.