Subcellular Localization
min:
: max
Winner_takes_all: golgi, plasma membrane, peroxisome
Predictor Summary:
Predictor Summary:
- golgi 2
- extracellular 1
- plasma membrane 2
- endoplasmic reticulum 1
- vacuole 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G114400.1 | Wheat | golgi, peroxisome, plasma membrane | 97.97 | 97.97 |
| TraesCS6A01G082900.1 | Wheat | golgi, peroxisome, plasma membrane | 97.29 | 97.29 |
| HORVU6Hr1G014300.1 | Barley | cytosol, golgi, peroxisome | 94.24 | 95.21 |
| TraesCS4D01G355600.1 | Wheat | golgi, peroxisome, plasma membrane | 79.32 | 80.14 |
| TraesCS5D01G560400.1 | Wheat | golgi, peroxisome, plasma membrane | 75.59 | 76.63 |
| TraesCS5D01G548900.1 | Wheat | golgi, peroxisome, plasma membrane | 73.56 | 75.09 |
| TraesCS5D01G561700.1 | Wheat | golgi, peroxisome, plasma membrane | 68.47 | 71.13 |
| OQU91911 | Sorghum | plasma membrane | 65.42 | 68.44 |
| Os03t0861300-01 | Rice | cytosol, peroxisome, plasma membrane | 63.39 | 66.79 |
| Zm00001d014285_P001 | Maize | plasma membrane | 64.07 | 66.78 |
| TraesCS2D01G206300.1 | Wheat | golgi | 65.08 | 66.21 |
| TraesCS2D01G376100.1 | Wheat | plasma membrane | 64.41 | 65.52 |
| TraesCS2D01G376000.1 | Wheat | golgi | 64.41 | 65.52 |
| TraesCS6D01G212900.1 | Wheat | golgi, plasma membrane | 63.39 | 65.38 |
| TraesCS5D01G112500.1 | Wheat | plasma membrane | 63.05 | 65.03 |
| TraesCS2D01G063900.1 | Wheat | plasma membrane | 61.02 | 63.38 |
| TraesCS5D01G338200.1 | Wheat | plasma membrane | 57.97 | 58.76 |
| TraesCS6D01G227500.1 | Wheat | golgi | 56.27 | 57.24 |
| TraesCS6D01G389500.1 | Wheat | plasma membrane | 55.93 | 56.51 |
| TraesCS6D01G389400.1 | Wheat | plasma membrane | 55.93 | 56.51 |
| TraesCS5D01G185400.1 | Wheat | plasma membrane | 55.59 | 56.16 |
| TraesCS7D01G192200.1 | Wheat | golgi, peroxisome, plasma membrane | 52.88 | 51.32 |
| TraesCS2D01G404800.2 | Wheat | golgi, peroxisome, plasma membrane | 53.56 | 50.32 |
| TraesCS2D01G411400.1 | Wheat | plasma membrane | 29.15 | 34.68 |
| TraesCS6D01G232100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 28.47 | 33.73 |
| TraesCS3D01G540900.1 | Wheat | plasma membrane | 28.47 | 33.33 |
| TraesCS2D01G370800.1 | Wheat | plasma membrane | 29.49 | 32.83 |
| TraesCS3D01G163400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 26.1 | 31.3 |
| TraesCS1D01G175200.1 | Wheat | unclear | 27.8 | 31.18 |
| TraesCS4D01G308800.1 | Wheat | golgi, plasma membrane, vacuole | 27.12 | 31.13 |
| TraesCS7D01G339600.1 | Wheat | plasma membrane | 27.8 | 29.39 |
| TraesCS2D01G411500.1 | Wheat | endoplasmic reticulum | 25.42 | 28.63 |
| TraesCS4D01G344300.1 | Wheat | plasma membrane | 24.41 | 28.24 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.2 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0055085 |
| InterPro:IPR023271 | InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 |
| PANTHER:PTHR19139 | PANTHER:PTHR19139:SF163 | SUPFAM:SSF81338 | TIGRFAMs:TIGR00861 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS6D01G076400 |
| EnsemblPlants:TraesCS6D01G076400.1 | TIGR:cd00333 | : | : | : | : |
Description
No Description!
Coordinates
chr6D:+:41207038..41207925
Molecular Weight (calculated)
30959.4 Da
IEP (calculated)
9.084
GRAVY (calculated)
0.366
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGAAQGKQS REAHGNNDIS VTKDYLDPPA VRLFDAGELG QWSLYRAIIS EFTASLLFVY VSIATVIGHK RQTDAEACSG AGVLGIAWAF GGMIAVLVYC
101: TAGISGGHVN PAVTFGLLLA RKLSLPRALL YTSAQCLGAI CGAAMVRAVH GARYYELYGG GANEVSPGYS KAGGLLAEAA GTFVLVYTVF SATDPKRMAR
201: DTHVPVLAPL LIGFAVVVAH LATIPVTGTG INPARSLGAA VVYNNSKAWS EQWIFWVGPF SGAAVAMAYH QYILRGGAAA KPHFNFDNGF RRLGC
101: TAGISGGHVN PAVTFGLLLA RKLSLPRALL YTSAQCLGAI CGAAMVRAVH GARYYELYGG GANEVSPGYS KAGGLLAEAA GTFVLVYTVF SATDPKRMAR
201: DTHVPVLAPL LIGFAVVVAH LATIPVTGTG INPARSLGAA VVYNNSKAWS EQWIFWVGPF SGAAVAMAYH QYILRGGAAA KPHFNFDNGF RRLGC
001: MRALTIAIVS LYKQLSFVSS VFTNTTYPQY KTQLSYITKK VIEMAKDVEG PEGFQTRDYE DPPPTPFFDA DELTKWSLYR AVIAEFVATL LFLYITVLTV
101: IGYKIQSDTK AGGVDCGGVG ILGIAWAFGG MIFILVYCTA GISGGHINPA VTFGLFLARK VSLIRAVLYM VAQCLGAICG VGFVKAFQSS YYDRYGGGAN
201: SLADGYNTGT GLAAEIIGTF VLVYTVFSAT DPKRNARDSH VPVLAPLPIG FAVFMVHLAT IPITGTGINP ARSFGAAVIY NKSKPWDDHW IFWVGPFIGA
301: AIAAFYHQFV LRASGSKSLG SFRSAANV
101: IGYKIQSDTK AGGVDCGGVG ILGIAWAFGG MIFILVYCTA GISGGHINPA VTFGLFLARK VSLIRAVLYM VAQCLGAICG VGFVKAFQSS YYDRYGGGAN
201: SLADGYNTGT GLAAEIIGTF VLVYTVFSAT DPKRNARDSH VPVLAPLPIG FAVFMVHLAT IPITGTGINP ARSFGAAVIY NKSKPWDDHW IFWVGPFIGA
301: AIAAFYHQFV LRASGSKSLG SFRSAANV
Arabidopsis Description
PIP2Bplasma membrane intrinsic protein 2 [Source:TAIR;Acc:AT2G37170]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.