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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane, vacuole
Any Predictor:secretory
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G165400.1
TraesCS1B01G182200.1
TraesCS1D01G175200.1
TraesCS2A01G198500.1
TraesCS2A01G374400.1
TraesCS2B01G225900.1
TraesCS2B01G391400.1
TraesCS2D01G206300.1
TraesCS2D01G370800.1
TraesCS4A01G410800.1
TraesCS4B01G310900.1
TraesCS4D01G308800.1
TraesCS7A01G331300.1
TraesCS7B01G243000.1
TraesCS7D01G339600.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G36830.1 TraesCS1A01G165400.1 AT1G73190.1 21798944
AT2G36830.1 TraesCS1B01G182200.1 AT1G73190.1 21798944
AT2G36830.1 TraesCS1D01G175200.1 AT1G73190.1 21798944
AT2G36830.1 TraesCS2A01G374400.1 AT1G73190.1 21798944
AT2G36830.1 TraesCS2B01G391400.1 AT1G73190.1 21798944
AT2G36830.1 TraesCS2D01G370800.1 AT1G73190.1 21798944
AT3G26520.1 TraesCS1A01G165400.1 AT1G73190.1 23163742
AT3G26520.1 TraesCS1B01G182200.1 AT1G73190.1 23163742
AT3G26520.1 TraesCS1D01G175200.1 AT1G73190.1 23163742
AT3G26520.1 TraesCS2A01G374400.1 AT1G73190.1 23163742
AT3G26520.1 TraesCS2B01G391400.1 AT1G73190.1 23163742
AT3G26520.1 TraesCS2D01G370800.1 AT1G73190.1 23163742
AT3G26520.1 TraesCS7A01G331300.1 AT3G16240.1 23163742
AT3G26520.1 TraesCS7B01G243000.1 AT3G16240.1 23163742
AT3G26520.1 TraesCS7D01G339600.1 AT3G16240.1 23163742
AT3G26520.1 TraesCS4A01G410800.1 AT3G26520.1 23163742
AT3G26520.1 TraesCS4B01G310900.1 AT3G26520.1 23163742
AT3G26520.1 TraesCS4D01G308800.1 AT3G26520.1 23163742
AT3G26520.1 TraesCS2A01G198500.1 AT3G53420.1 23163742
AT3G26520.1 TraesCS2B01G225900.1 AT3G53420.1 23163742
AT3G26520.1 TraesCS2D01G206300.1 AT3G53420.1 23163742
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU4Hr1G079230.1 Barley vacuole 93.39 96.0
TraesCS4B01G310900.1 Wheat unclear 93.39 96.0
TraesCS4A01G410800.1 Wheat golgi, plasma membrane, vacuole 93.0 95.6
EER92857 Sorghum cytosol 86.38 88.8
Zm00001d027652_P001 Maize plasma membrane 85.6 88.0
Os03t0146100-01 Rice nucleus 84.44 86.8
GSMUA_Achr8P12920_001 Banana cytosol, plasma membrane, vacuole 78.99 81.2
GSMUA_Achr11P... Banana cytosol, extracellular, vacuole 77.43 79.6
GSMUA_Achr5P19470_001 Banana endoplasmic reticulum, plasma membrane, vacuole 76.26 78.09
Solyc06g074820.2.1 Tomato plastid 75.88 78.0
GSMUA_Achr1P01270_001 Banana cytosol, plasma membrane, vacuole 75.88 78.0
PGSC0003DMT400018375 Potato cytosol 75.49 77.6
CDY66645 Canola plastid 64.59 75.11
CDY67380 Canola plastid 64.59 75.11
Bra017222.1-P Field mustard cytosol 72.37 74.1
VIT_08s0007g04780.t01 Wine grape cytosol 71.6 73.31
CDY53270 Canola plasma membrane 71.21 72.91
KRH67767 Soybean mitochondrion 70.43 72.4
AT3G26520.1 Thale cress plasma membrane 71.21 72.33
AT2G36830.1 Thale cress golgi, plasma membrane, vacuole 70.04 71.71
CDY48983 Canola plasma membrane 70.43 71.54
Bra032937.1-P Field mustard plasma membrane 70.43 71.54
CDX83623 Canola golgi, plasma membrane, plastid 70.43 71.54
CDY28539 Canola plasma membrane 70.43 71.54
CDY13639 Canola plasma membrane 70.43 71.54
Bra025210.1-P Field mustard plasma membrane 70.04 71.15
KRG96046 Soybean nucleus 68.87 70.8
TraesCS3D01G540900.1 Wheat plasma membrane 67.32 68.65
VIT_06s0061g00730.t01 Wine grape cytosol, plasma membrane, vacuole 66.15 67.73
TraesCS6D01G232100.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 60.31 62.25
TraesCS2D01G411400.1 Wheat plasma membrane 57.59 59.68
TraesCS7D01G339600.1 Wheat plasma membrane 59.14 54.48
TraesCS3D01G163400.1 Wheat endoplasmic reticulum, extracellular, vacuole 49.42 51.63
TraesCS1D01G175200.1 Wheat unclear 52.14 50.95
TraesCS2D01G370800.1 Wheat plasma membrane 49.81 48.3
TraesCS4D01G344300.1 Wheat plasma membrane 42.8 43.14
TraesCS2D01G411500.1 Wheat endoplasmic reticulum 37.74 37.02
TraesCS5D01G561700.1 Wheat golgi, peroxisome, plasma membrane 35.8 32.39
TraesCS2D01G206300.1 Wheat golgi 35.41 31.38
TraesCS5D01G112500.1 Wheat plasma membrane 34.24 30.77
TraesCS5D01G560400.1 Wheat golgi, peroxisome, plasma membrane 34.63 30.58
TraesCS5D01G548900.1 Wheat golgi, peroxisome, plasma membrane 34.24 30.45
TraesCS6D01G212900.1 Wheat golgi, plasma membrane 33.85 30.42
TraesCS2D01G376100.1 Wheat plasma membrane 33.46 29.66
TraesCS2D01G376000.1 Wheat golgi 33.07 29.31
TraesCS4D01G355600.1 Wheat golgi, peroxisome, plasma membrane 33.07 29.11
TraesCS2D01G063900.1 Wheat plasma membrane 31.91 28.87
TraesCS5D01G338200.1 Wheat plasma membrane 32.3 28.52
TraesCS6D01G389400.1 Wheat plasma membrane 31.91 28.08
TraesCS6D01G389500.1 Wheat plasma membrane 31.91 28.08
TraesCS6D01G227500.1 Wheat golgi 31.52 27.93
TraesCS5D01G185400.1 Wheat plasma membrane 31.52 27.74
TraesCS6D01G076400.1 Wheat golgi, peroxisome, plasma membrane 31.13 27.12
TraesCS7D01G192200.1 Wheat golgi, peroxisome, plasma membrane 28.02 23.68
TraesCS2D01G404800.2 Wheat golgi, peroxisome, plasma membrane 28.02 22.93
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.3InterPro:Aquaporin-likeInterPro:Aquaporin_transptrGO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0055085
InterPro:IPR023271InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783ScanProsite:PS00221
PANTHER:PTHR19139PANTHER:PTHR19139:SF55SUPFAM:SSF81338TMHMM:TMhelixEnsemblPlantsGene:TraesCS4D01G308800EnsemblPlants:TraesCS4D01G308800.1
TIGR:cd00333SEG:seg::::
Description
No Description!
Coordinates
chr4D:-:476875200..476876565
Molecular Weight (calculated)
26311.2 Da
IEP (calculated)
7.596
GRAVY (calculated)
0.865
Length
257 amino acids
Sequence
(BLAST)
001: MPVSRIAVGS HREVYEVGAL KAALAEFIST LIFVFAGQGS GMAFSKLSPD GAATPAGLIS AAIAHAFALF VAVSVGANIS GGHVNPAVTF GAFVGGNITL
101: FRGLLYWVAQ LLGSTAACFL LRFSTGGLPT GTFGLTGIGA WEAVVLEIVM TFGLVYTVYA TAVDPKKGSL GTIAPIAIGF IVGANILVGG AFSGASMNPA
201: VSFGPALVSW EWGYQWVYWV GPLIGGGLAG VIYELLFISI RVMIDRVSSS SPSLPSP
Best Arabidopsis Sequence Match ( AT3G26520.1 )
(BLAST)
001: MPTRNIAIGG VQEEVYHPNA LRAALAEFIS TLIFVFAGSG SGIAFNKITD NGATTPSGLV AAALAHAFGL FVAVSVGANI SGGHVNPAVT FGVLLGGNIT
101: LLRGILYWIA QLLGSVAACF LLSFATGGEP IPAFGLSAGV GSLNALVFEI VMTFGLVYTV YATAVDPKNG SLGTIAPIAI GFIVGANILA GGAFSGASMN
201: PAVAFGPAVV SWTWTNHWVY WAGPLIGGGL AGIIYDFVFI DENAHEQLPT TDY
Arabidopsis Description
TIP1-2Aquaporin TIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q41963]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.