Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- vacuole 3
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g074820.2.1 | Tomato | plastid | 99.6 | 99.6 |
| Zm00001d027652_P001 | Maize | plasma membrane | 80.8 | 80.8 |
| Os03t0146100-01 | Rice | nucleus | 80.8 | 80.8 |
| GSMUA_Achr8P12920_001 | Banana | cytosol, plasma membrane, vacuole | 80.0 | 80.0 |
| EER92857 | Sorghum | cytosol | 79.6 | 79.6 |
| GSMUA_Achr1P01270_001 | Banana | cytosol, plasma membrane, vacuole | 79.6 | 79.6 |
| HORVU4Hr1G079230.1 | Barley | vacuole | 79.6 | 79.6 |
| TraesCS4B01G310900.1 | Wheat | unclear | 79.6 | 79.6 |
| TraesCS4A01G410800.1 | Wheat | golgi, plasma membrane, vacuole | 79.6 | 79.6 |
| GSMUA_Achr11P... | Banana | cytosol, extracellular, vacuole | 79.2 | 79.2 |
| PGSC0003DMT400072432 | Potato | cytosol | 78.4 | 79.03 |
| GSMUA_Achr5P19470_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 76.8 | 76.49 |
| TraesCS4D01G308800.1 | Wheat | golgi, plasma membrane, vacuole | 77.6 | 75.49 |
| PGSC0003DMT400077927 | Potato | cytosol, plasma membrane, plastid, vacuole | 76.0 | 75.1 |
| PGSC0003DMT400042613 | Potato | cytosol, extracellular, plasma membrane | 59.2 | 59.44 |
| PGSC0003DMT400030994 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 59.2 | 59.2 |
| PGSC0003DMT400068047 | Potato | cytosol, extracellular, plastid, vacuole | 56.4 | 56.85 |
| PGSC0003DMT400006558 | Potato | endoplasmic reticulum, plasma membrane | 56.0 | 56.22 |
| PGSC0003DMT400024847 | Potato | extracellular, plasma membrane, vacuole | 52.4 | 53.04 |
| PGSC0003DMT400069330 | Potato | cytosol | 54.4 | 52.51 |
| PGSC0003DMT400039507 | Potato | cytosol, golgi, plasma membrane | 52.8 | 50.77 |
| PGSC0003DMT400038394 | Potato | plastid | 42.8 | 42.63 |
| PGSC0003DMT400053882 | Potato | extracellular | 30.4 | 38.78 |
| PGSC0003DMT400053877 | Potato | plasma membrane | 37.6 | 33.69 |
| PGSC0003DMT400027154 | Potato | plasma membrane | 36.8 | 32.74 |
| PGSC0003DMT400009240 | Potato | cytosol, extracellular, plasma membrane | 32.0 | 31.87 |
| PGSC0003DMT400015824 | Potato | plasma membrane | 35.2 | 31.1 |
| PGSC0003DMT400068708 | Potato | plasma membrane | 34.8 | 30.74 |
| PGSC0003DMT400020870 | Potato | plasma membrane | 35.2 | 30.66 |
| PGSC0003DMT400062174 | Potato | plasma membrane | 34.8 | 30.42 |
| PGSC0003DMT400053881 | Potato | plasma membrane | 37.2 | 30.29 |
| PGSC0003DMT400060322 | Potato | mitochondrion | 32.8 | 29.82 |
| PGSC0003DMT400000151 | Potato | cytosol, peroxisome, plasma membrane | 33.2 | 29.12 |
| PGSC0003DMT400012780 | Potato | cytosol, peroxisome, plasma membrane | 32.8 | 28.47 |
| PGSC0003DMT400053479 | Potato | plasma membrane | 32.0 | 27.97 |
| PGSC0003DMT400014809 | Potato | peroxisome | 32.0 | 27.87 |
| PGSC0003DMT400032134 | Potato | cytosol, peroxisome, plasma membrane | 31.6 | 27.62 |
| PGSC0003DMT400064008 | Potato | extracellular | 10.4 | 23.21 |
Protein Annotations
| Gene3D:1.20.1080.10 | EntrezGene:102591890 | MapMan:24.3.1.3 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | InterPro:IPR023271 | UniProt:M1AAI2 | InterPro:MIP | InterPro:MIP_CS |
| PFAM:PF00230 | EnsemblPlantsGene:PGSC0003DMG400007134 | PGSC:PGSC0003DMG400007134 | EnsemblPlants:PGSC0003DMT400018375 | PRINTS:PR00783 | ScanProsite:PS00221 |
| PANTHER:PTHR19139 | PANTHER:PTHR19139:SF265 | SUPFAM:SSF81338 | TMHMM:TMhelix | UniParc:UPI000295EF6D | RefSeq:XP_006347203.1 |
Description
Tonoplast intrinsic protein [Source:PGSC_GENE;Acc:PGSC0003DMG400007134]
Coordinates
chr6:+:55372054..55374660
Molecular Weight (calculated)
25751.2 Da
IEP (calculated)
6.127
GRAVY (calculated)
0.793
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MPINQITIGS HEELRHPGAL KAALAEFIST LIFVFAGQGS GMAFNKLTDG VATPAGLISA SIAHAFGLFV AVSVGANISG GHVNPAVTFG AFVGGNITLF
101: RGILYIIAQL LGSTAACALL EFATGGMSTG SFALSAGVSV WNAFVFEIVM TFGLVYTVYA TAVDPKKGDL GVIAPIAIGF IVGANILAGG AFTGASMNPA
201: VSFGPSLISW TWTHQWVYWA GPLIGGGLAG FIYEFIFISH THEQIPSGDF
101: RGILYIIAQL LGSTAACALL EFATGGMSTG SFALSAGVSV WNAFVFEIVM TFGLVYTVYA TAVDPKKGDL GVIAPIAIGF IVGANILAGG AFTGASMNPA
201: VSFGPSLISW TWTHQWVYWA GPLIGGGLAG FIYEFIFISH THEQIPSGDF
001: MPIRNIAIGR PDEATRPDAL KAALAEFIST LIFVVAGSGS GMAFNKLTEN GATTPSGLVA AAVAHAFGLF VAVSVGANIS GGHVNPAVTF GAFIGGNITL
101: LRGILYWIAQ LLGSVVACLI LKFATGGLAV PAFGLSAGVG VLNAFVFEIV MTFGLVYTVY ATAIDPKNGS LGTIAPIAIG FIVGANILAG GAFSGASMNP
201: AVAFGPAVVS WTWTNHWVYW AGPLVGGGIA GLIYEVFFIN TTHEQLPTTD Y
101: LRGILYWIAQ LLGSVVACLI LKFATGGLAV PAFGLSAGVG VLNAFVFEIV MTFGLVYTVY ATAIDPKNGS LGTIAPIAIG FIVGANILAG GAFSGASMNP
201: AVAFGPAVVS WTWTNHWVYW AGPLVGGGIA GLIYEVFFIN TTHEQLPTTD Y
Arabidopsis Description
TIP1-1Aquaporin TIP1-1 [Source:UniProtKB/Swiss-Prot;Acc:P25818]
SUBAcon: [plasma membrane,golgi,vacuole]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.