Skip to main content
crop-pal logo
Potato
Search for another protein from :
Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • vacuole 3
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, plastid, secretory
BaCelLo:plastid
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400006495
PGSC0003DMT400015077
PGSC0003DMT400039507
PGSC0003DMT400050482
PGSC0003DMT400069330
PGSC0003DMT400071510
PGSC0003DMT400073246

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G73190.1 PGSC0003DMT400039507 AT1G73190.1 23163742
AT1G73190.1 PGSC0003DMT400069330 AT1G73190.1 23163742
AT1G73190.1 PGSC0003DMT400006495 AT3G16310.1 21798944
AT1G73190.1 PGSC0003DMT400071510 AT4G19030.1 21798944
AT1G73190.1 PGSC0003DMT400073246 AT4G19030.1 21798944
AT1G73190.1 PGSC0003DMT400015077 AT5G22290.1 21798944
AT1G73190.1 PGSC0003DMT400050482 AT5G22290.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc06g072130.2.1 Tomato extracellular 98.07 98.07
PGSC0003DMT400039507 Potato cytosol, golgi, plasma membrane 82.63 82.31
VIT_16s0039g00220.t01 Wine grape cytosol 72.2 72.2
KRH09321 Soybean cytosol, mitochondrion, plasma membrane 69.11 70.2
CDY66321 Canola plasma membrane 71.81 69.92
KRH38823 Soybean nucleus 68.34 69.41
Bra008079.1-P Field mustard golgi, mitochondrion, plasma membrane 71.04 69.17
CDY48045 Canola golgi, mitochondrion, plasma membrane 71.04 69.17
AT1G73190.1 Thale cress plasma membrane 71.43 69.03
AT1G17810.1 Thale cress cytosol, golgi, plasma membrane 70.66 68.54
Bra016014.1-P Field mustard cytosol 69.88 68.3
CDX72962 Canola plasma membrane 69.88 68.3
GSMUA_Achr4P26010_001 Banana cytosol, golgi, plasma membrane 66.8 68.11
CDY11123 Canola cytosol 69.5 67.92
CDX68239 Canola cytosol 69.5 67.92
CDX96453 Canola cytosol 69.5 67.92
CDX81850 Canola golgi, mitochondrion, plasma membrane 69.5 67.42
GSMUA_Achr2P10640_001 Banana cytosol, golgi, plasma membrane 66.02 67.32
KRH34280 Soybean endoplasmic reticulum 66.02 67.32
Bra031005.1-P Field mustard golgi, mitochondrion, plasma membrane 69.11 67.04
CDY21731 Canola golgi, mitochondrion, plasma membrane 69.11 67.04
KRG92517 Soybean cytosol 65.25 66.54
Bra025947.1-P Field mustard cytosol, golgi, plasma membrane 67.95 65.92
CDY19176 Canola plasma membrane 67.95 65.92
CDY26214 Canola plasma membrane 67.57 65.54
Zm00001d032610_P003 Maize mitochondrion, plastid 65.25 63.53
Zm00001d013956_P003 Maize plasma membrane 63.71 62.98
EER94020 Sorghum golgi, mitochondrion, plasma membrane 63.32 61.65
PGSC0003DMT400072432 Potato cytosol 58.3 60.89
Os10t0492600-01 Rice plastid 61.78 60.61
HORVU1Hr1G043890.2 Barley mitochondrion 61.0 60.08
TraesCS1B01G182200.1 Wheat golgi 60.62 59.7
TraesCS1D01G175200.1 Wheat unclear 60.23 59.32
TraesCS1A01G165400.1 Wheat golgi, mitochondrion, plasma membrane, plastid 60.23 59.32
PGSC0003DMT400077927 Potato cytosol, plasma membrane, plastid, vacuole 55.21 56.52
Os04t0527900-01 Rice plastid 55.98 54.72
PGSC0003DMT400018375 Potato cytosol 52.51 54.4
Zm00001d002952_P001 Maize plasma membrane 54.83 53.58
TraesCS2D01G370800.1 Wheat plasma membrane 54.05 52.83
TraesCS2A01G374400.1 Wheat plasma membrane 54.05 52.83
PGSC0003DMT400068047 Potato cytosol, extracellular, plastid, vacuole 50.58 52.82
PGSC0003DMT400030994 Potato endoplasmic reticulum, plasma membrane, vacuole 50.97 52.8
TraesCS2B01G391400.1 Wheat extracellular, plasma membrane, vacuole 53.67 52.45
EES11105 Sorghum mitochondrion, plasma membrane 54.05 52.24
PGSC0003DMT400042613 Potato cytosol, extracellular, plasma membrane 49.81 51.81
PGSC0003DMT400006558 Potato endoplasmic reticulum, plasma membrane 47.1 49.0
PGSC0003DMT400024847 Potato extracellular, plasma membrane, vacuole 45.17 47.37
PGSC0003DMT400038394 Potato plastid 43.24 44.62
EER95659 Sorghum mitochondrion 45.95 43.91
PGSC0003DMT400053882 Potato extracellular 28.96 38.27
PGSC0003DMT400009240 Potato cytosol, extracellular, plasma membrane 33.2 34.26
Zm00001d048520_P014 Maize mitochondrion 33.98 32.84
PGSC0003DMT400027154 Potato plasma membrane 33.59 30.96
PGSC0003DMT400053877 Potato plasma membrane 33.2 30.82
PGSC0003DMT400012780 Potato cytosol, peroxisome, plasma membrane 33.98 30.56
PGSC0003DMT400000151 Potato cytosol, peroxisome, plasma membrane 33.59 30.53
PGSC0003DMT400020870 Potato plasma membrane 33.59 30.31
PGSC0003DMT400014809 Potato peroxisome 33.59 30.31
PGSC0003DMT400032134 Potato cytosol, peroxisome, plasma membrane 33.2 30.07
PGSC0003DMT400053479 Potato plasma membrane 32.82 29.72
PGSC0003DMT400064008 Potato extracellular 12.74 29.46
PGSC0003DMT400062174 Potato plasma membrane 32.43 29.37
PGSC0003DMT400068708 Potato plasma membrane 32.05 29.33
PGSC0003DMT400015824 Potato plasma membrane 32.05 29.33
PGSC0003DMT400060322 Potato mitochondrion 29.73 28.0
PGSC0003DMT400053881 Potato plasma membrane 32.82 27.69
Protein Annotations
Gene3D:1.20.1080.10EntrezGene:102601143MapMan:24.3.1.3InterPro:Aquaporin-likeInterPro:Aquaporin_transptrGO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0015267GO:GO:0016020
GO:GO:0016021GO:GO:0055085InterPro:IPR023271UniProt:M1CKB1InterPro:MIPInterPro:MIP_CS
PFAM:PF00230EnsemblPlantsGene:PGSC0003DMG400026969PGSC:PGSC0003DMG400026969EnsemblPlants:PGSC0003DMT400069330PRINTS:PR00783ScanProsite:PS00221
PANTHER:PTHR19139PANTHER:PTHR19139:SF30SUPFAM:SSF81338TIGRFAMs:TIGR00861TMHMM:TMhelixUniParc:UPI000294A647
RefSeq:XP_006347387.1SEG:seg::::
Description
Aquaporin, MIP family, TIP subfamily [Source:PGSC_GENE;Acc:PGSC0003DMG400026969]
Coordinates
chr6:-:52919403..52920465
Molecular Weight (calculated)
27478.4 Da
IEP (calculated)
7.318
GRAVY (calculated)
0.492
Length
259 amino acids
Sequence
(BLAST)
001: MQPRRYEFGR ADEATHPDSM RATLSEFLST FIFVFAGEGS VLALDKLYPD RGLGASRLTA IALAHAFSLF AAVASSMNVS GGHINPAVTF GALVGGRVSV
101: LRAIYYWIGQ LLGAVVASAL LRLATDGLRP VGFAVAPGVG NGNALVMEIV MTFGLVYTVY ATAIDPKRGS LGIIAPLAIA FIVGANVLVG GPFEGASMNP
201: ARAFGPALVG WRWRNHWIYW LGPFIGAAIA GIIYEFGLIQ AHDEAPVHTH HQPLAPEDY
Best Arabidopsis Sequence Match ( AT1G17810.1 )
(BLAST)
001: MATSARRAYG FGRADEATHP DSIRATLAEF LSTFVFVFAG EGSILALDKL YWDTAAHTGT NTPGGLVLVA LAHALALFAA VSAAINVSGG HVNPAVTFAA
101: LIGGRISVIR AIYYWVAQLI GAILACLLLR LATNGLRPVG FHVASGVSEL HGLLMEIILT FALVYVVYST AIDPKRGSIG IIAPLAIGLI VGANILVGGP
201: FDGASMNPAR AFGPALVGWR WSNHWIYWVG PFIGGALAAL IYEYMIIPSV NEPPHHSTHQ PLAPEDY
Arabidopsis Description
TIP3-2BETA-TIP [Source:UniProtKB/TrEMBL;Acc:A0A178WI57]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.