Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G73190.1 | EER94020 | AT1G73190.1 | 23163742 |
| AT1G73190.1 | EER95659 | AT1G73190.1 | 23163742 |
| AT1G73190.1 | EES11105 | AT1G73190.1 | 23163742 |
| AT1G73190.1 | EES02290 | AT3G16310.1 | 21798944 |
| AT1G73190.1 | EES19830 | AT3G16310.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER94020 | Sorghum | golgi, mitochondrion, plasma membrane | 57.93 | 59.02 |
| GSMUA_Achr4P26010_001 | Banana | cytosol, golgi, plasma membrane | 52.77 | 56.3 |
| GSMUA_Achr2P10640_001 | Banana | cytosol, golgi, plasma membrane | 52.03 | 55.51 |
| Zm00001d048520_P014 | Maize | mitochondrion | 52.4 | 52.99 |
| VIT_16s0039g00220.t01 | Wine grape | cytosol | 48.34 | 50.58 |
| EES11105 | Sorghum | mitochondrion, plasma membrane | 47.6 | 48.13 |
| KRH34280 | Soybean | endoplasmic reticulum | 45.02 | 48.03 |
| Bra016014.1-P | Field mustard | cytosol | 46.86 | 47.92 |
| CDX96453 | Canola | cytosol | 46.49 | 47.55 |
| CDX72962 | Canola | plasma membrane | 46.49 | 47.55 |
| KRG92517 | Soybean | cytosol | 44.28 | 47.24 |
| CDY66321 | Canola | plasma membrane | 46.13 | 46.99 |
| PGSC0003DMT400039507 | Potato | cytosol, golgi, plasma membrane | 45.02 | 46.92 |
| CDY48045 | Canola | golgi, mitochondrion, plasma membrane | 45.76 | 46.62 |
| Bra008079.1-P | Field mustard | golgi, mitochondrion, plasma membrane | 45.76 | 46.62 |
| Solyc03g019820.2.1 | Tomato | cytosol, golgi, plasma membrane | 44.65 | 46.54 |
| EER92857 | Sorghum | cytosol | 42.8 | 46.4 |
| KRH09321 | Soybean | cytosol, mitochondrion, plasma membrane | 43.54 | 46.27 |
| AT1G73190.1 | Thale cress | plasma membrane | 45.76 | 46.27 |
| CDX68239 | Canola | cytosol | 45.02 | 46.04 |
| CDY11123 | Canola | cytosol | 45.02 | 46.04 |
| Solyc06g072130.2.1 | Tomato | extracellular | 43.91 | 45.95 |
| PGSC0003DMT400069330 | Potato | cytosol | 43.91 | 45.95 |
| KRH38823 | Soybean | nucleus | 43.17 | 45.88 |
| AT1G17810.1 | Thale cress | cytosol, golgi, plasma membrane | 44.28 | 44.94 |
| CDY19176 | Canola | plasma membrane | 43.91 | 44.57 |
| Bra025947.1-P | Field mustard | cytosol, golgi, plasma membrane | 43.91 | 44.57 |
| CDX81850 | Canola | golgi, mitochondrion, plasma membrane | 43.91 | 44.57 |
| CDY26214 | Canola | plasma membrane | 43.91 | 44.57 |
| Bra031005.1-P | Field mustard | golgi, mitochondrion, plasma membrane | 43.54 | 44.19 |
| CDY21731 | Canola | golgi, mitochondrion, plasma membrane | 43.54 | 44.19 |
| EES02191 | Sorghum | cytosol | 40.59 | 43.65 |
| EES04303 | Sorghum | cytosol | 40.96 | 43.02 |
| KXG31483 | Sorghum | extracellular, golgi, plasma membrane | 36.53 | 39.13 |
| EER89797 | Sorghum | plasma membrane | 35.06 | 38.31 |
| KXG31086 | Sorghum | golgi, plasma membrane, vacuole | 35.06 | 38.15 |
| OQU82093 | Sorghum | plasma membrane | 37.27 | 37.83 |
| EES12617 | Sorghum | plasma membrane | 34.69 | 37.75 |
| EES17913 | Sorghum | cytosol, plastid | 34.32 | 29.62 |
| OQU91911 | Sorghum | plasma membrane | 28.41 | 27.3 |
| EER98451 | Sorghum | plasma membrane | 28.04 | 26.21 |
| EER98453 | Sorghum | plasma membrane | 27.31 | 25.87 |
| EER98452 | Sorghum | plasma membrane | 27.31 | 25.87 |
| EES11257 | Sorghum | cytosol, peroxisome, plasma membrane | 27.31 | 25.69 |
| EER98457 | Sorghum | plasma membrane | 26.94 | 25.52 |
| EER98454 | Sorghum | plasma membrane | 26.94 | 25.52 |
| OQU85985 | Sorghum | cytosol, peroxisome, plasma membrane | 27.31 | 25.52 |
| EES11124 | Sorghum | plasma membrane | 27.31 | 25.34 |
| EER89434 | Sorghum | peroxisome | 27.68 | 25.34 |
| EES05459 | Sorghum | plasma membrane | 26.57 | 24.91 |
| EES07484 | Sorghum | plasma membrane | 26.57 | 24.91 |
| OQU88961 | Sorghum | plastid | 26.57 | 19.25 |
| KXG36091 | Sorghum | cytosol, peroxisome, plasma membrane | 20.66 | 17.18 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.3 | EntrezGene:8078014 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | UniProt:C5WMN1 |
| EnsemblPlants:EER95659 | ProteinID:EER95659 | ProteinID:EER95659.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005886 | GO:GO:0005887 |
| GO:GO:0006810 | GO:GO:0006833 | GO:GO:0008150 | GO:GO:0009705 | GO:GO:0015250 | GO:GO:0015267 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0034220 | GO:GO:0042807 | GO:GO:0055085 | InterPro:IPR023271 |
| InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 |
| PANTHER:PTHR19139:SF132 | EnsemblPlantsGene:SORBI_3001G535900 | SUPFAM:SSF81338 | TMHMM:TMhelix | UniParc:UPI0001A832BF | RefSeq:XP_002468661.1 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:79929261..79930715
Molecular Weight (calculated)
27628.9 Da
IEP (calculated)
9.941
GRAVY (calculated)
0.578
Length
271 amino acids
Sequence
(BLAST)
(BLAST)
001: MNMIRSVRRR FTVGHMATAT DPATLRRAAA ELLATAIFVF AAEGATLSLG RMHRHDKGGG VVGGLVVVAL AHALALAAAV ACAANTSGGH VNPAVTFGAL
101: LAGRICLVRS LVYWAAQLLG AVAAALVLRL ATGGMHLPEY ALAGCVSGWQ AAVLEAAMAF GLMHAYFVTV MDHHTRRVRA GAGAGAVAAP LAVGLLAGAN
201: VLACGALEGA VMNPARAFGP AVVGSRRWGN HWVYWVGPMV GAGLSGVLYE HLVAGGEEAE PAPSCGGRRR E
101: LAGRICLVRS LVYWAAQLLG AVAAALVLRL ATGGMHLPEY ALAGCVSGWQ AAVLEAAMAF GLMHAYFVTV MDHHTRRVRA GAGAGAVAAP LAVGLLAGAN
201: VLACGALEGA VMNPARAFGP AVVGSRRWGN HWVYWVGPMV GAGLSGVLYE HLVAGGEEAE PAPSCGGRRR E
001: MATSARRAYG FGRADEATHP DSIRATLAEF LSTFVFVFAG EGSILALDKL YWDTAAHTGT NTPGGLVLVA LAHALALFAA VSAAINVSGG HVNPAVTFAA
101: LIGGRISVIR AIYYWVAQLI GAILACLLLR LATNGLRPVG FHVASGVSEL HGLLMEIILT FALVYVVYST AIDPKRGSIG IIAPLAIGLI VGANILVGGP
201: FDGASMNPAR AFGPALVGWR WSNHWIYWVG PFIGGALAAL IYEYMIIPSV NEPPHHSTHQ PLAPEDY
101: LIGGRISVIR AIYYWVAQLI GAILACLLLR LATNGLRPVG FHVASGVSEL HGLLMEIILT FALVYVVYST AIDPKRGSIG IIAPLAIGLI VGANILVGGP
201: FDGASMNPAR AFGPALVGWR WSNHWIYWVG PFIGGALAAL IYEYMIIPSV NEPPHHSTHQ PLAPEDY
Arabidopsis Description
TIP3-2BETA-TIP [Source:UniProtKB/TrEMBL;Acc:A0A178WI57]
SUBAcon: [plasma membrane,golgi,cytosol]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.