Skip to main content
crop-pal logo
Banana
Search for another protein from :
Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, cytosol

Predictor Summary:
  • nucleus 1
  • vacuole 3
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, golgi, plasma membrane
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:golgi
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr2P10640_001
GSMUA_Achr4P08270_001
GSMUA_Achr4P10230_001
GSMUA_Achr4P15460_001
GSMUA_Achr4P26010_001
GSMUA_Achr6P14800_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G73190.1 GSMUA_Achr2P10640_001 AT1G73190.1 23163742
AT1G73190.1 GSMUA_Achr4P26010_001 AT1G73190.1 23163742
AT1G73190.1 GSMUA_Achr4P08270_001 AT3G16310.1 21798944
AT1G73190.1 GSMUA_Achr4P15460_001 AT3G16310.1 21798944
AT1G73190.1 GSMUA_Achr6P14800_001 AT3G16310.1 21798944
AT1G73190.1 GSMUA_Achr4P10230_001 AT4G19030.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr2P10640_001 Banana cytosol, golgi, plasma membrane 89.76 89.76
Zm00001d013956_P003 Maize plasma membrane 79.53 77.1
TraesCS1D01G175200.1 Wheat unclear 77.56 74.9
HORVU1Hr1G043890.2 Barley mitochondrion 77.56 74.9
Zm00001d032610_P003 Maize mitochondrion, plastid 78.35 74.81
EER94020 Sorghum golgi, mitochondrion, plasma membrane 78.35 74.81
TraesCS1A01G165400.1 Wheat golgi, mitochondrion, plasma membrane, plastid 77.17 74.52
Os10t0492600-01 Rice plastid 77.17 74.24
TraesCS1B01G182200.1 Wheat golgi 76.77 74.14
VIT_16s0039g00220.t01 Wine grape cytosol 74.41 72.97
Solyc06g072130.2.1 Tomato extracellular 68.5 67.18
PGSC0003DMT400069330 Potato cytosol 68.11 66.8
Solyc03g019820.2.1 Tomato cytosol, golgi, plasma membrane 68.11 66.54
CDX72962 Canola plasma membrane 69.29 66.42
Bra016014.1-P Field mustard cytosol 69.29 66.42
PGSC0003DMT400039507 Potato cytosol, golgi, plasma membrane 67.72 66.15
KRH34280 Soybean endoplasmic reticulum 66.14 66.14
CDX96453 Canola cytosol 68.9 66.04
AT1G17810.1 Thale cress cytosol, golgi, plasma membrane 69.29 65.92
CDY11123 Canola cytosol 68.11 65.28
CDX68239 Canola cytosol 68.11 65.28
KRH38823 Soybean nucleus 65.35 65.1
CDY66321 Canola plasma membrane 68.11 65.04
KRH09321 Soybean cytosol, mitochondrion, plasma membrane 64.96 64.71
KRG92517 Soybean cytosol 64.57 64.57
CDY48045 Canola golgi, mitochondrion, plasma membrane 67.32 64.29
Bra008079.1-P Field mustard golgi, mitochondrion, plasma membrane 67.32 64.29
Bra025947.1-P Field mustard cytosol, golgi, plasma membrane 67.32 64.04
AT1G73190.1 Thale cress plasma membrane 67.32 63.81
TraesCS2D01G370800.1 Wheat plasma membrane 66.54 63.77
CDY26214 Canola plasma membrane 66.93 63.67
TraesCS2A01G374400.1 Wheat plasma membrane 66.14 63.4
Bra031005.1-P Field mustard golgi, mitochondrion, plasma membrane 66.54 63.3
CDX81850 Canola golgi, mitochondrion, plasma membrane 66.54 63.3
CDY19176 Canola plasma membrane 66.54 63.3
CDY21731 Canola golgi, mitochondrion, plasma membrane 66.54 63.3
Os04t0527900-01 Rice plastid 65.75 63.02
Zm00001d002952_P001 Maize plasma membrane 65.35 62.64
TraesCS2B01G391400.1 Wheat extracellular, plasma membrane, vacuole 65.35 62.64
EES11105 Sorghum mitochondrion, plasma membrane 65.35 61.94
GSMUA_Achr11P... Banana cytosol, extracellular, vacuole 59.84 60.8
GSMUA_Achr1P01270_001 Banana cytosol, plasma membrane, vacuole 59.45 60.4
GSMUA_Achr8P12920_001 Banana cytosol, plasma membrane, vacuole 59.45 60.4
GSMUA_Achr10P... Banana plasma membrane 59.84 60.32
GSMUA_Achr5P19470_001 Banana endoplasmic reticulum, plasma membrane, vacuole 58.27 58.96
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, plastid, vacuole 54.72 57.2
GSMUA_Achr6P15380_001 Banana cytosol, plasma membrane, vacuole 56.3 56.75
GSMUA_Achr11P... Banana endoplasmic reticulum, plasma membrane 53.54 54.62
GSMUA_Achr11P... Banana extracellular, plasma membrane 53.54 54.62
GSMUA_Achr9P28940_001 Banana plasma membrane 52.36 54.29
EER95659 Sorghum mitochondrion 56.3 52.77
GSMUA_Achr6P05830_001 Banana endoplasmic reticulum, extracellular, plasma membrane 50.79 52.65
GSMUA_Achr10P... Banana cytosol, plasma membrane, vacuole 48.43 49.4
GSMUA_Achr9P06260_001 Banana cytosol, golgi, plasma membrane 42.13 41.96
GSMUA_Achr5P12400_001 Banana extracellular 30.71 41.05
GSMUA_Achr1P13800_001 Banana cytosol 40.94 40.94
GSMUA_Achr2P03980_001 Banana extracellular 29.92 40.0
GSMUA_Achr1P00370_001 Banana extracellular 29.92 40.0
Zm00001d048520_P014 Maize mitochondrion 41.73 39.55
GSMUA_Achr4P24600_001 Banana golgi, plasma membrane, plastid 40.94 39.54
GSMUA_AchrUn_... Banana extracellular 29.53 39.47
GSMUA_Achr1P26390_001 Banana endoplasmic reticulum, extracellular, plasma membrane, plastid 30.71 39.39
GSMUA_AchrUn_... Banana extracellular 29.13 38.95
GSMUA_Achr8P11540_001 Banana extracellular 29.13 38.95
GSMUA_AchrUn_... Banana extracellular 29.13 38.95
GSMUA_Achr8P33980_001 Banana extracellular 30.32 38.69
GSMUA_AchrUn_... Banana extracellular 28.74 37.44
GSMUA_Achr8P33990_001 Banana extracellular 29.13 37.37
GSMUA_Achr5P11480_001 Banana plasma membrane 29.13 37.37
GSMUA_Achr11P... Banana extracellular 31.1 36.92
GSMUA_Achr10P... Banana plasma membrane 31.1 36.92
GSMUA_Achr8P18910_001 Banana extracellular 28.35 36.73
GSMUA_Achr11P... Banana extracellular 28.35 36.73
GSMUA_Achr1P07460_001 Banana extracellular 24.41 35.43
GSMUA_Achr4P20780_001 Banana extracellular 27.17 35.2
GSMUA_Achr1P02360_001 Banana unclear 35.83 32.27
GSMUA_Achr2P11190_001 Banana plasma membrane 35.43 32.03
GSMUA_Achr1P26380_001 Banana plasma membrane 35.43 32.03
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.3InterPro:Aquaporin-likeInterPro:Aquaporin_transptrGO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0016021
GO:GO:0055085EnsemblPlantsGene:GSMUA_Achr4G26010_001EnsemblPlants:GSMUA_Achr4P26010_001EnsemblPlants:GSMUA_Achr4T26010_001InterPro:IPR023271UniProt:M0SS62
InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783ScanProsite:PS00221PANTHER:PTHR19139
PANTHER:PTHR19139:SF30SUPFAM:SSF81338TIGRFAMs:TIGR00861TMHMM:TMhelixUniParc:UPI000295796BSEG:seg
Description
Aquaporin TIP3-2 [Source:GMGC_GENE;Acc:GSMUA_Achr4G26010_001]
Coordinates
chr4:+:25303207..25304131
Molecular Weight (calculated)
26672.9 Da
IEP (calculated)
9.335
GRAVY (calculated)
0.709
Length
254 amino acids
Sequence
(BLAST)
001: MPPRRFAFGR TDDAVHPDTM RAALSEFIAT ALFVFAAEGS ILSLGKLYKD TSTAGGLVVV AIAHALALAV AVAIAFNISG GHVNPAVTLG ALVGGRISLV
101: RAVFYWVAQL LGAVVAALLL RLATGGMRPV GFSVASGVSD WHAVLLEIVM TFGLVYTVYA TAIDPKRGHL GTIAPLAIGF ILGANILAGG PFDGAAMNPA
201: RAFGPALIGW RWKHHWVYWV GPFIGAALAG VMYEFLMIPA EAPRTHQPLA PEDY
Best Arabidopsis Sequence Match ( AT1G17810.1 )
(BLAST)
001: MATSARRAYG FGRADEATHP DSIRATLAEF LSTFVFVFAG EGSILALDKL YWDTAAHTGT NTPGGLVLVA LAHALALFAA VSAAINVSGG HVNPAVTFAA
101: LIGGRISVIR AIYYWVAQLI GAILACLLLR LATNGLRPVG FHVASGVSEL HGLLMEIILT FALVYVVYST AIDPKRGSIG IIAPLAIGLI VGANILVGGP
201: FDGASMNPAR AFGPALVGWR WSNHWIYWVG PFIGGALAAL IYEYMIIPSV NEPPHHSTHQ PLAPEDY
Arabidopsis Description
TIP3-2BETA-TIP [Source:UniProtKB/TrEMBL;Acc:A0A178WI57]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.