Factsheet for GSMUA_Achr8P33980_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 3
nucleus 1
extracellular 3
plasma membrane 2
endoplasmic reticulum 1
vacuole 1
golgi 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P33990_001	Banana	extracellular	89.45	89.9
GSMUA_Achr1P26390_001	Banana	endoplasmic reticulum, extracellular, plasma membrane, plastid	84.42	84.85
GSMUA_Achr5P11480_001	Banana	plasma membrane	84.42	84.85
GSMUA_Achr11P...	Banana	extracellular	79.9	81.12
GSMUA_Achr4P20780_001	Banana	extracellular	77.39	78.57
GSMUA_Achr8P18910_001	Banana	extracellular	77.39	78.57
GSMUA_AchrUn_...	Banana	extracellular	74.87	76.41
GSMUA_Achr1P00370_001	Banana	extracellular	72.86	76.32
GSMUA_AchrUn_...	Banana	extracellular	72.36	75.79
GSMUA_AchrUn_...	Banana	extracellular	72.36	75.79
GSMUA_Achr8P11540_001	Banana	extracellular	71.86	75.26
GSMUA_Achr5P12400_001	Banana	extracellular	71.86	75.26
GSMUA_Achr2P03980_001	Banana	extracellular	71.86	75.26
GSMUA_AchrUn_...	Banana	extracellular	70.85	74.21
GSMUA_Achr1P07460_001	Banana	extracellular	63.32	72.0
GSMUA_Achr11P...	Banana	extracellular	72.36	67.29
GSMUA_Achr10P...	Banana	plasma membrane	72.36	67.29
GSMUA_Achr2P11190_001	Banana	plasma membrane	84.42	59.79
GSMUA_Achr1P02360_001	Banana	unclear	84.42	59.57
GSMUA_Achr1P26380_001	Banana	plasma membrane	75.88	53.74
GSMUA_Achr9P28940_001	Banana	plasma membrane	39.7	32.24
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid, vacuole	37.19	30.45
GSMUA_Achr4P26010_001	Banana	cytosol, golgi, plasma membrane	38.69	30.32
GSMUA_Achr2P10640_001	Banana	cytosol, golgi, plasma membrane	37.69	29.53
GSMUA_Achr6P05830_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	36.18	29.39
GSMUA_Achr10P...	Banana	plasma membrane	37.19	29.37
GSMUA_Achr11P...	Banana	extracellular, plasma membrane	36.68	29.32
GSMUA_Achr11P...	Banana	endoplasmic reticulum, plasma membrane	36.68	29.32
GSMUA_Achr1P01270_001	Banana	cytosol, plasma membrane, vacuole	36.68	29.2
GSMUA_Achr8P12920_001	Banana	cytosol, plasma membrane, vacuole	35.68	28.4
GSMUA_Achr6P15380_001	Banana	cytosol, plasma membrane, vacuole	35.68	28.17
GSMUA_Achr11P...	Banana	cytosol, extracellular, vacuole	35.18	28.0
GSMUA_Achr5P19470_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	35.18	27.89
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, vacuole	32.66	26.1
GSMUA_Achr4P24600_001	Banana	golgi, plasma membrane, plastid	33.17	25.1
GSMUA_Achr9P06260_001	Banana	cytosol, golgi, plasma membrane	30.65	23.92
GSMUA_Achr1P13800_001	Banana	cytosol	29.15	22.83

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.2	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	EnsemblPlantsGene:GSMUA_Achr8G33980_001	EnsemblPlants:GSMUA_Achr8P33980_001	EnsemblPlants:GSMUA_Achr8T33980_001	InterPro:IPR023271	UniProt:M0TW00
InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139
PANTHER:PTHR19139:SF196	SUPFAM:SSF81338	TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI000294D4AA	:

Description

Probable aquaporin PIP2-6 [Source:GMGC_GENE;Acc:GSMUA_Achr8G33980_001]

Coordinates

chr8:+:34898000..34899283

Molecular Weight (calculated)

21424.5 Da

IEP (calculated)

10.695

GRAVY (calculated)

0.500

Length

199 amino acids

Sequence
(BLAST)

001: MIFVLVYCTA GISGGHINPA VTFGLFLARK VSLLRAVFYM VAQCMGAICG VGIVKGIMKH QFNRFGGGAN VVAPGYSKGT ALGAEIIGTF LLVYTVFAAT
101: DPKRRARDSH VPVLAPLPIG FAVFMVHLAT IPITGTGINP ARSFGPAVIY NRHKPWHDHW IFWVGPFVGA LAAEVYHQHV LRAANVKTLG SFRSSRSNC

Best Arabidopsis Sequence Match ( AT2G16850.1 )
(BLAST)

001: MSKEVSEEGR HGKDYVDPPP APLLDMAELK LWSFYRAIIA EFIATLLFLY VTVATVIGHK NQTGPCGGVG LLGIAWAFGG MIFVLVYCTA GISGGHINPA
101: VTFGLFLARK VSLPRAVAYM VAQCLGAICG VGLVKAFMMT PYKRLGGGAN TVADGYSTGT ALGAEIIGTF VLVYTVFSAT DPKRSARDSH VPVLAPLPIG
201: FAVFMVHLAT IPITGTGINP ARSFGAAVIY NNEKAWDDHW IFWVGPFVGA LAAAAYHQYI LRAAAIKALA SFRSNPTN

Arabidopsis Description

PIP2-8Probable aquaporin PIP2-8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVX8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.