Factsheet for GSMUA_Achr1P07460_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 2
vacuole 3
plasma membrane 3
golgi 2
nucleus 1
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane, vacuole
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr1P02360_001
GSMUA_Achr1P07460_001
GSMUA_Achr1P20280_001
GSMUA_Achr1P26380_001
GSMUA_Achr2P11190_001
GSMUA_Achr4P10230_001
GSMUA_Achr5P11480_001
GSMUA_Achr5P12400_001
GSMUA_Achr5P20880_001
GSMUA_Achr8P11120_001
GSMUA_Achr8P11540_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G16850.1	GSMUA_Achr5P12400_001	AT1G01620.1	21798944
AT2G16850.1	GSMUA_Achr8P11540_001	AT1G01620.1	21798944
AT2G16850.1	GSMUA_AchrUn_...	AT1G01620.1	21798944
AT2G16850.1	GSMUA_AchrUn_...	AT1G01620.1	21798944
AT2G16850.1	GSMUA_Achr11P...	AT3G60600.1	21798944
AT2G16850.1	GSMUA_Achr11P...	AT3G60600.1	21798944
AT2G16850.1	GSMUA_Achr1P20280_001	AT3G60600.1	21798944
AT2G16850.1	GSMUA_Achr5P20880_001	AT3G60600.1	21798944
AT2G16850.1	GSMUA_Achr8P11120_001	AT3G60600.1	21798944
AT2G16850.1	GSMUA_Achr5P12400_001	AT4G00430.1	21798944
AT2G16850.1	GSMUA_Achr8P11540_001	AT4G00430.1	21798944
AT2G16850.1	GSMUA_AchrUn_...	AT4G00430.1	21798944
AT2G16850.1	GSMUA_AchrUn_...	AT4G00430.1	21798944
AT2G16850.1	GSMUA_Achr4P10230_001	AT4G19030.1	21798944
AT2G16850.1	GSMUA_Achr5P12400_001	AT4G23400.1	21798944
AT2G16850.1	GSMUA_Achr8P11540_001	AT4G23400.1	21798944
AT2G16850.1	GSMUA_AchrUn_...	AT4G23400.1	21798944
AT2G16850.1	GSMUA_AchrUn_...	AT4G23400.1	21798944
AT4G35100.1	GSMUA_Achr5P12400_001	AT1G01620.1	21798944
AT4G35100.1	GSMUA_Achr8P11540_001	AT1G01620.1	21798944
AT4G35100.1	GSMUA_AchrUn_...	AT1G01620.1	21798944
AT4G35100.1	GSMUA_AchrUn_...	AT1G01620.1	21798944
AT4G35100.1	GSMUA_Achr1P02360_001	AT2G16850.1	21798944
AT4G35100.1	GSMUA_Achr1P07460_001	AT2G16850.1	21798944
AT4G35100.1	GSMUA_Achr1P26380_001	AT2G16850.1	21798944
AT4G35100.1	GSMUA_Achr2P11190_001	AT2G16850.1	21798944
AT4G35100.1	GSMUA_Achr5P11480_001	AT2G16850.1	21798944
AT4G35100.1	GSMUA_Achr11P...	AT3G60600.1	21798944
AT4G35100.1	GSMUA_Achr11P...	AT3G60600.1	21798944
AT4G35100.1	GSMUA_Achr1P20280_001	AT3G60600.1	21798944
AT4G35100.1	GSMUA_Achr5P20880_001	AT3G60600.1	21798944
AT4G35100.1	GSMUA_Achr8P11120_001	AT3G60600.1	21798944
AT4G35100.1	GSMUA_Achr5P12400_001	AT3G61430.1	21798944
AT4G35100.1	GSMUA_Achr8P11540_001	AT3G61430.1	21798944
AT4G35100.1	GSMUA_AchrUn_...	AT3G61430.1	21798944
AT4G35100.1	GSMUA_AchrUn_...	AT3G61430.1	21798944
AT4G35100.1	GSMUA_Achr5P12400_001	AT4G00430.1	21798944
AT4G35100.1	GSMUA_Achr8P11540_001	AT4G00430.1	21798944
AT4G35100.1	GSMUA_AchrUn_...	AT4G00430.1	21798944
AT4G35100.1	GSMUA_AchrUn_...	AT4G00430.1	21798944
AT4G35100.1	GSMUA_Achr5P12400_001	AT4G23400.1	21798944
AT4G35100.1	GSMUA_Achr8P11540_001	AT4G23400.1	21798944
AT4G35100.1	GSMUA_AchrUn_...	AT4G23400.1	21798944
AT4G35100.1	GSMUA_AchrUn_...	AT4G23400.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P11480_001	Banana	plasma membrane	76.57	67.68
GSMUA_Achr8P33990_001	Banana	extracellular	73.14	64.65
GSMUA_Achr8P33980_001	Banana	extracellular	72.0	63.32
GSMUA_Achr4P20780_001	Banana	extracellular	68.0	60.71
GSMUA_Achr1P26390_001	Banana	endoplasmic reticulum, extracellular, plasma membrane, plastid	68.57	60.61
GSMUA_Achr8P18910_001	Banana	extracellular	67.43	60.2
GSMUA_Achr11P...	Banana	extracellular	66.86	59.69
GSMUA_AchrUn_...	Banana	extracellular	65.71	58.97
GSMUA_AchrUn_...	Banana	extracellular	64.0	58.95
GSMUA_Achr8P11540_001	Banana	extracellular	64.0	58.95
GSMUA_Achr1P00370_001	Banana	extracellular	63.43	58.42
GSMUA_Achr2P03980_001	Banana	extracellular	62.86	57.89
GSMUA_AchrUn_...	Banana	extracellular	62.86	57.89
GSMUA_AchrUn_...	Banana	extracellular	62.29	57.37
GSMUA_Achr5P12400_001	Banana	extracellular	62.29	57.37
KRH16406	Soybean	extracellular	47.43	54.25
GSMUA_Achr11P...	Banana	extracellular	63.43	51.87
CDX72515	Canola	golgi, plasma membrane	74.86	51.57
GSMUA_Achr10P...	Banana	plasma membrane	62.29	50.93
GSMUA_Achr1P02360_001	Banana	unclear	77.71	48.23
GSMUA_Achr2P11190_001	Banana	plasma membrane	77.14	48.04
AT2G16850.1	Thale cress	plasma membrane	74.86	47.12
CDX69112	Canola	plasma membrane	74.86	46.62
VIT_03s0038g02520.t01	Wine grape	plasma membrane	74.29	46.59
KRH60692	Soybean	mitochondrion	73.14	46.55
KRH51390	Soybean	plasma membrane	73.71	46.4
Bra011585.1-P	Field mustard	plasma membrane	74.29	46.26
CDX76314	Canola	cytosol	74.29	46.26
CDY17511	Canola	plasma membrane	74.29	46.26
CDY52648	Canola	plasma membrane	74.29	46.26
Bra017697.1-P	Field mustard	cytosol	73.71	45.91
PGSC0003DMT400009240	Potato	cytosol, extracellular, plasma membrane	65.71	45.82
AT4G35100.1	Thale cress	plasma membrane	73.14	45.71
Bra034675.1-P	Field mustard	cytosol, peroxisome, plasma membrane	73.14	45.55
Solyc02g083510.2.1	Tomato	nucleus	66.86	45.17
Solyc01g111660.2.1	Tomato	nucleus	72.0	44.52
PGSC0003DMT400015824	Potato	plasma membrane	72.0	44.52
Solyc10g055630.1.1	Tomato	nucleus, plastid	70.29	43.46
PGSC0003DMT400068708	Potato	plasma membrane	70.29	43.46
GSMUA_Achr1P26380_001	Banana	plasma membrane	69.14	43.06
GSMUA_Achr9P28940_001	Banana	plasma membrane	36.0	25.71
GSMUA_Achr6P05830_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	34.86	24.9
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid, vacuole	34.29	24.69
GSMUA_Achr4P26010_001	Banana	cytosol, golgi, plasma membrane	35.43	24.41
GSMUA_Achr2P10640_001	Banana	cytosol, golgi, plasma membrane	34.86	24.02
GSMUA_Achr11P...	Banana	endoplasmic reticulum, plasma membrane	33.14	23.29
GSMUA_Achr11P...	Banana	extracellular, plasma membrane	33.14	23.29
GSMUA_Achr10P...	Banana	plasma membrane	33.14	23.02
GSMUA_Achr1P01270_001	Banana	cytosol, plasma membrane, vacuole	32.57	22.8
GSMUA_Achr8P12920_001	Banana	cytosol, plasma membrane, vacuole	32.0	22.4
GSMUA_Achr6P15380_001	Banana	cytosol, plasma membrane, vacuole	32.0	22.22
GSMUA_Achr5P19470_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	31.43	21.91
GSMUA_Achr11P...	Banana	cytosol, extracellular, vacuole	30.86	21.6
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, vacuole	29.71	20.88
GSMUA_Achr9P06260_001	Banana	cytosol, golgi, plasma membrane	26.86	18.43
GSMUA_Achr1P13800_001	Banana	cytosol	26.29	18.11
GSMUA_Achr4P24600_001	Banana	golgi, plasma membrane, plastid	26.29	17.49

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.2	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	EnsemblPlantsGene:GSMUA_Achr1G07460_001	EnsemblPlants:GSMUA_Achr1P07460_001	EnsemblPlants:GSMUA_Achr1T07460_001	InterPro:IPR023271	UniProt:M0RXV4
InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139
PANTHER:PTHR19139:SF196	SUPFAM:SSF81338	TMHMM:TMhelix	UniParc:UPI00029547E3	SEG:seg	:

Description

Aquaporin PIP2-7 [Source:GMGC_GENE;Acc:GSMUA_Achr1G07460_001]

Coordinates

chr1:-:5803409..5804098

Molecular Weight (calculated)

18318.6 Da

IEP (calculated)

10.666

GRAVY (calculated)

0.514

Length

175 amino acids

Sequence
(BLAST)

001: MRLLPGEHIN PAVSFGLLLG RKISLLRAVL DMVLQCMGAI CGVGIVKGIM NHPYNSLGGR ANQVAAGCSQ GTALGAEIIG TFVLVYTVFS ATDPKRSARD
101: SHVPVMAPLP IGFAVFTVHL GTGINPARSL GAAVLYDQRK AWLAVVQWIF WVGPFAGALA AAVKASSSFR SSNGK

Best Arabidopsis Sequence Match ( AT1G01620.1 )
(BLAST)

001: MEGKEEDVRV GANKFPERQP IGTSAQTDKD YKEPPPAPFF EPGELSSWSF YRAGIAEFIA TFLFLYITVL TVMGVKRAPN MCASVGIQGI AWAFGGMIFA
101: LVYCTAGISG GHINPAVTFG LFLARKLSLT RAVFYIVMQC LGAICGAGVV KGFQPNPYQT LGGGANTVAH GYTKGSGLGA EIIGTFVLVY TVFSATDAKR
201: SARDSHVPIL APLPIGFAVF LVHLATIPIT GTGINPARSL GAAIIYNKDH AWDDHWIFWV GPFIGAALAA LYHQLVIRAI PFKSRS

Arabidopsis Description

PIP1-3TMP-B [Source:UniProtKB/TrEMBL;Acc:A0A178WIA6]
SUBAcon: [peroxisome,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.