Factsheet for GSMUA_AchrUn_randomP16230_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 4
extracellular 3
plasma membrane 2
endoplasmic reticulum 1
vacuole 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
PTS1:	peroxisome
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P20780_001	Banana	extracellular	91.79	91.33
GSMUA_Achr11P...	Banana	extracellular	91.28	90.82
GSMUA_Achr8P18910_001	Banana	extracellular	91.28	90.82
GSMUA_Achr5P11480_001	Banana	plasma membrane	82.05	80.81
GSMUA_Achr1P00370_001	Banana	extracellular	76.41	78.42
GSMUA_AchrUn_...	Banana	extracellular	75.9	77.89
GSMUA_Achr2P03980_001	Banana	extracellular	75.9	77.89
GSMUA_Achr5P12400_001	Banana	extracellular	74.87	76.84
GSMUA_AchrUn_...	Banana	extracellular	74.87	76.84
GSMUA_Achr8P33990_001	Banana	extracellular	77.95	76.77
GSMUA_Achr8P33980_001	Banana	extracellular	76.41	74.87
GSMUA_AchrUn_...	Banana	extracellular	72.82	74.74
GSMUA_Achr8P11540_001	Banana	extracellular	72.82	74.74
GSMUA_Achr1P26390_001	Banana	endoplasmic reticulum, extracellular, plasma membrane, plastid	72.82	71.72
GSMUA_Achr11P...	Banana	extracellular	75.9	69.16
GSMUA_Achr10P...	Banana	plasma membrane	74.87	68.22
GSMUA_Achr1P07460_001	Banana	extracellular	58.97	65.71
Zm00001d017288_P001	Maize	plasma membrane	92.31	62.5
Zm00001d003006_P001	Maize	plasma membrane	91.28	62.46
EES05459	Sorghum	plasma membrane	92.31	62.28
Zm00001d051174_P002	Maize	plasma membrane	92.31	62.28
TraesCS6A01G222100.1	Wheat	golgi, peroxisome, plasma membrane	90.26	61.54
TraesCS6D01G212900.1	Wheat	golgi, plasma membrane	90.26	61.54
TraesCS6B01G259000.1	Wheat	golgi, peroxisome, plasma membrane	89.74	61.19
Os02t0629200-02	Rice	plasma membrane	89.74	60.76
TraesCS2B01G396800.1	Wheat	golgi	90.26	60.69
EES11124	Sorghum	plasma membrane	90.77	60.62
TraesCS2D01G376100.1	Wheat	plasma membrane	89.74	60.34
TraesCS2A01G379900.1	Wheat	plasma membrane	89.74	60.34
Os04t0521100-01	Rice	plasma membrane	89.74	60.34
HORVU2Hr1G089940.3	Barley	plasma membrane	89.74	60.34
TraesCS2D01G376000.1	Wheat	golgi	88.72	59.66
TraesCS2A01G379800.1	Wheat	plasma membrane	88.72	59.66
TraesCS2B01G396700.2	Wheat	plasma membrane	88.72	58.64
GSMUA_Achr2P11190_001	Banana	plasma membrane	82.56	57.3
GSMUA_Achr1P02360_001	Banana	unclear	82.05	56.74
GSMUA_Achr1P26380_001	Banana	plasma membrane	70.77	49.11
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid, vacuole	39.49	31.69
GSMUA_Achr9P28940_001	Banana	plasma membrane	39.49	31.43
GSMUA_Achr10P...	Banana	plasma membrane	40.51	31.35
GSMUA_Achr6P05830_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	38.46	30.61
GSMUA_Achr1P01270_001	Banana	cytosol, plasma membrane, vacuole	38.97	30.4
GSMUA_Achr11P...	Banana	cytosol, extracellular, vacuole	38.46	30.0
GSMUA_Achr8P12920_001	Banana	cytosol, plasma membrane, vacuole	37.95	29.6
GSMUA_Achr6P15380_001	Banana	cytosol, plasma membrane, vacuole	37.95	29.37
GSMUA_Achr4P26010_001	Banana	cytosol, golgi, plasma membrane	37.44	28.74
GSMUA_Achr5P19470_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	36.41	28.29
GSMUA_Achr11P...	Banana	endoplasmic reticulum, plasma membrane	35.9	28.11
GSMUA_Achr11P...	Banana	extracellular, plasma membrane	35.38	27.71
GSMUA_Achr2P10640_001	Banana	cytosol, golgi, plasma membrane	35.38	27.17
GSMUA_Achr4P24600_001	Banana	golgi, plasma membrane, plastid	35.38	26.24
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, vacuole	33.33	26.1
GSMUA_Achr9P06260_001	Banana	cytosol, golgi, plasma membrane	31.28	23.92
GSMUA_Achr1P13800_001	Banana	cytosol	30.26	23.23

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.2	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	EnsemblPlantsGene:GSMUA_AchrUn_randomG16230_001	EnsemblPlants:GSMUA_AchrUn_randomP16230_001	EnsemblPlants:GSMUA_AchrUn_randomT16230_001	InterPro:IPR023271	UniProt:M0U9N2
InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139
PANTHER:PTHR19139:SF137	SUPFAM:SSF81338	TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI000295F452	SEG:seg

Description

Aquaporin PIP2-4 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG16230_001]

Coordinates

chrchrUn_random:+:76546921..76548187

Molecular Weight (calculated)

20604.2 Da

IEP (calculated)

9.508

GRAVY (calculated)

0.582

Length

195 amino acids

Sequence
(BLAST)

001: MIFILVYCTA GISGGHINPA VTFGLFLARK ISLVRALLYM IAQCLGAICG VGLVKGFQSA YYVRYGGGAN ELSDGYSKGT GLAAEIIGTF VLVYTVFSAT
101: DPKRNARDSH VPVLAPLPIG FAVFMVHLAT IPITGTGINP ARSFGAAVIY NKDKAWDDQW MFWVGPFIGA AVAAAYHQYI LRASGAKALG SSSSI

Best Arabidopsis Sequence Match ( AT2G37170.2 )
(BLAST)

001: MRALTIAIVS LYKQLSFVSS VFTNTTYPQY KTQLSYITKK VIEMAKDVEG PEGFQTRDYE DPPPTPFFDA DELTKWSLYR AVIAEFVATL LFLYITVLTV
101: IGYKIQSDTK AGGVDCGGVG ILGIAWAFGG MIFILVYCTA GISGGHINPA VTFGLFLARK VSLIRAVLYM VAQCLGAICG VGFVKAFQSS YYDRYGGGAN
201: SLADGYNTGT GLAAEIIGTF VLVYTVFSAT DPKRNARDSH VPVLAPLPIG FAVFMVHLAT IPITGTGINP ARSFGAAVIY NKSKPWDDHW IFWVGPFIGA
301: AIAAFYHQFV LRASGSKSLG SFRSAANV

Arabidopsis Description

PIP2Bplasma membrane intrinsic protein 2 [Source:TAIR;Acc:AT2G37170]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.