Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G212900.1 | Wheat | golgi, plasma membrane | 100.0 | 100.0 |
| TraesCS6B01G259000.1 | Wheat | golgi, peroxisome, plasma membrane | 99.65 | 99.65 |
| Os02t0629200-02 | Rice | plasma membrane | 94.41 | 93.75 |
| GSMUA_Achr4P20780_001 | Banana | extracellular | 61.89 | 90.31 |
| Zm00001d017288_P001 | Maize | plasma membrane | 90.91 | 90.28 |
| GSMUA_AchrUn_... | Banana | extracellular | 61.54 | 90.26 |
| Zm00001d051174_P002 | Maize | plasma membrane | 90.91 | 89.97 |
| GSMUA_Achr8P18910_001 | Banana | extracellular | 61.54 | 89.8 |
| EES05459 | Sorghum | plasma membrane | 90.56 | 89.62 |
| GSMUA_Achr11P... | Banana | extracellular | 60.84 | 88.78 |
| TraesCS2A01G379900.1 | Wheat | plasma membrane | 89.86 | 88.62 |
| TraesCS2A01G379800.1 | Wheat | plasma membrane | 89.51 | 88.28 |
| HORVU2Hr1G089940.3 | Barley | plasma membrane | 89.16 | 87.93 |
| TraesCS2A01G198500.1 | Wheat | plasma membrane | 84.97 | 83.79 |
| TraesCS5A01G100000.1 | Wheat | plasma membrane | 82.17 | 82.17 |
| TraesCS2A01G065700.1 | Wheat | golgi | 73.43 | 73.94 |
| TraesCS5A01G530600.1 | Wheat | golgi, peroxisome, plasma membrane | 69.93 | 68.49 |
| TraesCS4A01G312700.1 | Wheat | plasma membrane | 68.88 | 67.7 |
| TraesCS5A01G332300.1 | Wheat | plasma membrane | 68.53 | 67.35 |
| TraesCS6A01G245100.1 | Wheat | golgi, peroxisome, plasma membrane | 66.43 | 65.52 |
| TraesCS6A01G405700.1 | Wheat | golgi | 66.78 | 65.41 |
| TraesCS6A01G405600.1 | Wheat | plasma membrane | 66.78 | 65.41 |
| TraesCS5A01G181000.1 | Wheat | plastid | 66.08 | 65.17 |
| TraesCS6A01G082900.1 | Wheat | golgi, peroxisome, plasma membrane | 64.69 | 62.71 |
| TraesCS7A01G191200.1 | Wheat | golgi, peroxisome, plasma membrane | 61.19 | 57.57 |
| TraesCS4A01G286200.1 | Wheat | golgi, peroxisome, plasma membrane | 59.44 | 55.92 |
| TraesCS2A01G407700.2 | Wheat | golgi, peroxisome, plasma membrane | 50.7 | 50.17 |
| TraesCS7A01G331300.1 | Wheat | unclear | 32.87 | 37.9 |
| TraesCS2A01G414100.1 | Wheat | plasma membrane | 31.82 | 36.69 |
| TraesCS6A01G250300.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 31.82 | 36.55 |
| TraesCS3A01G535300.1 | Wheat | plasma membrane | 30.77 | 34.92 |
| TraesCS4A01G410800.1 | Wheat | golgi, plasma membrane, vacuole | 30.42 | 34.8 |
| TraesCS3A01G434600.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 26.92 | 32.49 |
| TraesCS2A01G374400.1 | Wheat | plasma membrane | 29.02 | 31.32 |
| TraesCS3A01G155800.1 | Wheat | plasma membrane | 26.57 | 30.65 |
| TraesCS2A01G414200.1 | Wheat | plastid | 27.97 | 30.53 |
| TraesCS1A01G165400.1 | Wheat | golgi, mitochondrion, plasma membrane, plastid | 27.62 | 30.04 |
| TraesCS5A01G518300.1 | Wheat | golgi, plasma membrane, vacuole | 25.87 | 28.91 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.2 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0055085 |
| InterPro:IPR023271 | InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 |
| PANTHER:PTHR19139 | PANTHER:PTHR19139:SF137 | SUPFAM:SSF81338 | TIGRFAMs:TIGR00861 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS6A01G222100 |
| EnsemblPlants:TraesCS6A01G222100.1 | TIGR:cd00333 | : | : | : | : |
Description
No Description!
Coordinates
chr6A:-:414875496..414878302
Molecular Weight (calculated)
30356.8 Da
IEP (calculated)
8.279
GRAVY (calculated)
0.466
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKDIEAAPQ GGEFSTKDYS DPPPAPIVDF EELTKWSLYR AVIAEFVATL LFLYITVATV IGYKHQSDPT VNTTDAACSG VGILGIAWAF GGMIFVLVYC
101: TAGVSGGHIN PAVTFGLFLA RKVSLIRALL YIIAQCLGAI CGVGLVKGFQ SSYYVRYGGG ANELSAGYSK GTGLAAEIIG TFVLVYTVFS ATDPKRNARD
201: SHIPVLAPLP IGFAVFMVHL ATIPITGTGI NPARSLGAAV IYNKDKAWDD QWIFWVGPLI GAAIAAAYHQ YVLRASAAKL GSYRSN
101: TAGVSGGHIN PAVTFGLFLA RKVSLIRALL YIIAQCLGAI CGVGLVKGFQ SSYYVRYGGG ANELSAGYSK GTGLAAEIIG TFVLVYTVFS ATDPKRNARD
201: SHIPVLAPLP IGFAVFMVHL ATIPITGTGI NPARSLGAAV IYNKDKAWDD QWIFWVGPLI GAAIAAAYHQ YVLRASAAKL GSYRSN
001: MRALTIAIVS LYKQLSFVSS VFTNTTYPQY KTQLSYITKK VIEMAKDVEG PEGFQTRDYE DPPPTPFFDA DELTKWSLYR AVIAEFVATL LFLYITVLTV
101: IGYKIQSDTK AGGVDCGGVG ILGIAWAFGG MIFILVYCTA GISGGHINPA VTFGLFLARK VSLIRAVLYM VAQCLGAICG VGFVKAFQSS YYDRYGGGAN
201: SLADGYNTGT GLAAEIIGTF VLVYTVFSAT DPKRNARDSH VPVLAPLPIG FAVFMVHLAT IPITGTGINP ARSFGAAVIY NKSKPWDDHW IFWVGPFIGA
301: AIAAFYHQFV LRASGSKSLG SFRSAANV
101: IGYKIQSDTK AGGVDCGGVG ILGIAWAFGG MIFILVYCTA GISGGHINPA VTFGLFLARK VSLIRAVLYM VAQCLGAICG VGFVKAFQSS YYDRYGGGAN
201: SLADGYNTGT GLAAEIIGTF VLVYTVFSAT DPKRNARDSH VPVLAPLPIG FAVFMVHLAT IPITGTGINP ARSFGAAVIY NKSKPWDDHW IFWVGPFIGA
301: AIAAFYHQFV LRASGSKSLG SFRSAANV
Arabidopsis Description
PIP2Bplasma membrane intrinsic protein 2 [Source:TAIR;Acc:AT2G37170]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.